RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 C2orf48Q96LS8 159 aa9.52□□□□□ -0.88
CLN8-204ENST00000519254 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.88
CLN8-204ENST00000519254 LECT2O14960 151 aa9.52□□□□□ -0.89
CLN8-204ENST00000519254 COX6CP09669 75 aa9.52□□□□□ -0.89
CLN8-204ENST00000519254 Q6ZR54 194 aa9.52□□□□□ -0.89
CLN8-204ENST00000519254 Q6ZRU5 148 aa9.51□□□□□ -0.89
CLN8-204ENST00000519254 NDUFC2O95298 119 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 SMCPP49901 116 aaPredicted RBP9.5□□□□□ -0.89
CLN8-204ENST00000519254 PRR3P79522 188 aaKnown RBP9.5□□□□□ -0.89
CLN8-204ENST00000519254 Q8NDZ9 215 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 ALMS1Q8TCU4 4167 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 ATXN8Q156A1 80 aa9.5□□□□□ -0.89
CLN8-204ENST00000519254 F8WDY8 70 aa9.49□□□□□ -0.89
CLN8-204ENST00000519254 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
CLN8-204ENST00000519254 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 LST1O00453 97 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 OCIAD2Q56VL3 154 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 Q6ZRN7 208 aaPredicted RBP9.47□□□□□ -0.89
CLN8-204ENST00000519254 OR13C6PQ8NH95 151 aa9.47□□□□□ -0.89
CLN8-204ENST00000519254 C9JAW5 83 aa9.46□□□□□ -0.9
CLN8-204ENST00000519254 SYCNQ0VAF6 134 aa9.46□□□□□ -0.9
CLN8-204ENST00000519254 KMT2AQ03164 3969 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 CBY1Q9Y3M2 126 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 LCE6AA0A183 80 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 SLPIP03973 132 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
CLN8-204ENST00000519254 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
CLN8-204ENST00000519254 NCR3O14931 201 aa9.43□□□□□ -0.9
CLN8-204ENST00000519254 SLC25A20O43772 301 aa9.43□□□□□ -0.9
CLN8-204ENST00000519254 SVIPQ8NHG7 77 aa9.43□□□□□ -0.9
CLN8-204ENST00000519254 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
CLN8-204ENST00000519254 M0QXV9 152 aa9.42□□□□□ -0.9
CLN8-204ENST00000519254 CARD19Q96LW7 228 aa9.42□□□□□ -0.9
CLN8-204ENST00000519254 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
CLN8-204ENST00000519254 TRBV10-2A0A0K0K1G8 114 aa9.41□□□□□ -0.9
CLN8-204ENST00000519254 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
CLN8-204ENST00000519254 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
CLN8-204ENST00000519254 Q6ZRP5 223 aa9.41□□□□□ -0.9
CLN8-204ENST00000519254 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
CLN8-204ENST00000519254 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.9
CLN8-204ENST00000519254 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.4□□□□□ -0.91
CLN8-204ENST00000519254 GAGE2EQ4V326 116 aa9.4□□□□□ -0.91
CLN8-204ENST00000519254 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.91
CLN8-204ENST00000519254 GAGE2DQ9UEU5 116 aa9.4□□□□□ -0.91
CLN8-204ENST00000519254 DNAH6Q9C0G6 4158 aa9.39□□□□□ -0.91
CLN8-204ENST00000519254 K7ERU9 68 aa9.39□□□□□ -0.91
CLN8-204ENST00000519254 C14orf177Q52M58 125 aa9.39□□□□□ -0.91
CLN8-204ENST00000519254 HYDINQ4G0P3 5121 aa9.39□□□□□ -0.91
CLN8-204ENST00000519254 H0YGX0 51 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 IGLV6-57P01721 117 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 TRACP01848 142 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 VPREB1P12018 145 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
CLN8-204ENST00000519254 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
CLN8-204ENST00000519254 A0A087WTM6 91 aa9.37□□□□□ -0.91
CLN8-204ENST00000519254 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
CLN8-204ENST00000519254 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
CLN8-204ENST00000519254 A0A087WYN8 130 aa9.36□□□□□ -0.91
CLN8-204ENST00000519254 H3BT86 120 aa9.36□□□□□ -0.91
CLN8-204ENST00000519254 RTL8CO15255 209 aa9.36□□□□□ -0.91
CLN8-204ENST00000519254 TNP2Q05952 138 aa9.35□□□□□ -0.91
CLN8-204ENST00000519254 Q8N814 137 aa9.35□□□□□ -0.91
CLN8-204ENST00000519254 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
CLN8-204ENST00000519254 C6orf99Q4VX62 202 aa9.33□□□□□ -0.92
CLN8-204ENST00000519254 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
CLN8-204ENST00000519254 M0R378 163 aa9.32□□□□□ -0.92
CLN8-204ENST00000519254 FUSP35637 526 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLN8-204ENST00000519254 PCP4P48539 62 aa9.32□□□□□ -0.92
CLN8-204ENST00000519254 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
CLN8-204ENST00000519254 BAALC-AS2P0C853 105 aa9.31□□□□□ -0.92
CLN8-204ENST00000519254 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
CLN8-204ENST00000519254 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
CLN8-204ENST00000519254 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
CLN8-204ENST00000519254 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 TRAV23DV6A0A075B6W5 121 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 TEX49A0A1B0GTD5 131 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 J3QR89 54 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
CLN8-204ENST00000519254 DNAL4O96015 105 aa9.28□□□□□ -0.92
CLN8-204ENST00000519254 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
CLN8-204ENST00000519254 A0A1B0GX51 115 aa9.27□□□□□ -0.92
CLN8-204ENST00000519254 FAM168BA1KXE4 195 aa9.27□□□□□ -0.92
CLN8-204ENST00000519254 LINC00167Q96N53 147 aa9.27□□□□□ -0.92
CLN8-204ENST00000519254 LINC00575Q6W349 94 aa9.27□□□□□ -0.93
CLN8-204ENST00000519254 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
CLN8-204ENST00000519254 IGLV5-37A0A075B6J1 123 aa9.26□□□□□ -0.93
CLN8-204ENST00000519254 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
CLN8-204ENST00000519254 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
CLN8-204ENST00000519254 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
CLN8-204ENST00000519254 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
CLN8-204ENST00000519254 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
CLN8-204ENST00000519254 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms