RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 YPEL4Q96NS1 127 aa9.24□□□□□ -0.93
MRPS28-204ENST00000519120 TMEM223A0PJW6 202 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 M0R378 163 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 PRLHP81277 87 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 FAM19A1Q7Z5A9 133 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
MRPS28-204ENST00000519120 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
MRPS28-204ENST00000519120 Q8NDZ9 215 aa9.22□□□□□ -0.93
MRPS28-204ENST00000519120 LINC00158P58513 81 aa9.21□□□□□ -0.94
MRPS28-204ENST00000519120 IGKV2D-26A0A0A0MRZ7 120 aa9.2□□□□□ -0.94
MRPS28-204ENST00000519120 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
MRPS28-204ENST00000519120 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
MRPS28-204ENST00000519120 HERV-K104P63124 156 aa9.18□□□□□ -0.94
MRPS28-204ENST00000519120 CBLN2Q8IUK8 224 aa9.18□□□□□ -0.94
MRPS28-204ENST00000519120 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
MRPS28-204ENST00000519120 HSBP1O75506 76 aa9.16□□□□□ -0.94
MRPS28-204ENST00000519120 ATP6V1G1O75348 118 aa9.15□□□□□ -0.94
MRPS28-204ENST00000519120 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
MRPS28-204ENST00000519120 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
MRPS28-204ENST00000519120 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
MRPS28-204ENST00000519120 PRYO14603 147 aa9.14□□□□□ -0.95
MRPS28-204ENST00000519120 MEIG1Q5JSS6 88 aa9.14□□□□□ -0.95
MRPS28-204ENST00000519120 SPRR1AP35321 89 aa9.13□□□□□ -0.95
MRPS28-204ENST00000519120 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
MRPS28-204ENST00000519120 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
MRPS28-204ENST00000519120 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
MRPS28-204ENST00000519120 NDUFA12Q9UI09 145 aa9.13□□□□□ -0.95
MRPS28-204ENST00000519120 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
MRPS28-204ENST00000519120 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 MAP1LC3CQ9BXW4 147 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
MRPS28-204ENST00000519120 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
MRPS28-204ENST00000519120 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
MRPS28-204ENST00000519120 MUC2Q02817 5179 aa9.11□□□□□ -0.95
MRPS28-204ENST00000519120 LEPROTL1O95214 131 aa9.1□□□□□ -0.95
MRPS28-204ENST00000519120 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
MRPS28-204ENST00000519120 LOC107984156A0A0G2JMH3 177 aa9.09□□□□□ -0.95
MRPS28-204ENST00000519120 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
MRPS28-204ENST00000519120 PLNP26678 52 aa9.09□□□□□ -0.95
MRPS28-204ENST00000519120 ARL17AQ8IVW1 177 aa9.09□□□□□ -0.95
MRPS28-204ENST00000519120 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
MRPS28-204ENST00000519120 NCR3O14931 201 aa9.08□□□□□ -0.96
MRPS28-204ENST00000519120 LEPROTO15243 131 aa9.08□□□□□ -0.96
MRPS28-204ENST00000519120 TRGC2P03986 189 aa9.08□□□□□ -0.96
MRPS28-204ENST00000519120 S100A12P80511 92 aa9.08□□□□□ -0.96
MRPS28-204ENST00000519120 LINC00310P59036 64 aa9.07□□□□□ -0.96
MRPS28-204ENST00000519120 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
MRPS28-204ENST00000519120 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 TRBV10-3A0A0K0K1G6 114 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 TRBV10-2A0A0K0K1G8 114 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 ETDCA0A1B0GVM5 59 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 SERF1AO75920 110 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
MRPS28-204ENST00000519120 H0Y8G0 127 aa9.05□□□□□ -0.96
MRPS28-204ENST00000519120 NMUP48645 174 aa9.05□□□□□ -0.96
MRPS28-204ENST00000519120 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
MRPS28-204ENST00000519120 J3QQQ9 107 aa9.04□□□□□ -0.96
MRPS28-204ENST00000519120 DPM2O94777 84 aa9.04□□□□□ -0.96
MRPS28-204ENST00000519120 HERVK_113P61574 105 aa9.04□□□□□ -0.96
MRPS28-204ENST00000519120 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
MRPS28-204ENST00000519120 CDIP1Q9H305 208 aa9.04□□□□□ -0.96
MRPS28-204ENST00000519120 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
MRPS28-204ENST00000519120 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
MRPS28-204ENST00000519120 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.97
MRPS28-204ENST00000519120 B5MCH6 92 aa9.01□□□□□ -0.97
MRPS28-204ENST00000519120 NDUFC2O95298 119 aa9.01□□□□□ -0.97
MRPS28-204ENST00000519120 IGKCP01834 107 aa9.01□□□□□ -0.97
MRPS28-204ENST00000519120 DDTP30046 118 aa9.01□□□□□ -0.97
MRPS28-204ENST00000519120 MIEN1Q9BRT3 115 aa9.01□□□□□ -0.97
MRPS28-204ENST00000519120 FABP4P15090 132 aa9□□□□□ -0.97
MRPS28-204ENST00000519120 LGALS3P17931 250 aaKnown RBP9□□□□□ -0.97
MRPS28-204ENST00000519120 DAND5Q8N907 189 aa9□□□□□ -0.97
MRPS28-204ENST00000519120 Q8NBF4 154 aa9□□□□□ -0.97
MRPS28-204ENST00000519120 PPDPFQ9H3Y8 114 aa9□□□□□ -0.97
MRPS28-204ENST00000519120 SPINK1P00995 79 aa8.99□□□□□ -0.97
MRPS28-204ENST00000519120 COLCA2A8K830 154 aa8.98□□□□□ -0.97
MRPS28-204ENST00000519120 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
MRPS28-204ENST00000519120 Q6ZRX8 168 aa8.98□□□□□ -0.97
MRPS28-204ENST00000519120 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
MRPS28-204ENST00000519120 E9PLD3 99 aa8.96□□□□□ -0.98
MRPS28-204ENST00000519120 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
MRPS28-204ENST00000519120 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.98
MRPS28-204ENST00000519120 Q9BRP9 147 aa8.96□□□□□ -0.98
MRPS28-204ENST00000519120 ERC2-IT1O76042 136 aa8.95□□□□□ -0.98
MRPS28-204ENST00000519120 S100A7L2Q5SY68 101 aa8.95□□□□□ -0.98
MRPS28-204ENST00000519120 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
MRPS28-204ENST00000519120 A0A0J9YXY3 114 aa8.94□□□□□ -0.98
MRPS28-204ENST00000519120 JOSD1Q15040 202 aaPredicted RBP8.94□□□□□ -0.98
MRPS28-204ENST00000519120 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
MRPS28-204ENST00000519120 TRAV23DV6A0A075B6W5 121 aa8.93□□□□□ -0.98
MRPS28-204ENST00000519120 C5orf52A6NGY3 159 aa8.92□□□□□ -0.98
MRPS28-204ENST00000519120 MOBPQ13875 183 aa8.92□□□□□ -0.98
MRPS28-204ENST00000519120 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
MRPS28-204ENST00000519120 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
MRPS28-204ENST00000519120 SOSTDC1Q6X4U4 206 aa8.92□□□□□ -0.98
MRPS28-204ENST00000519120 SLC7A5P1Q8MH63 180 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms