RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 KRTAP19-5Q3LI72 72 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 C5orf38Q86SI9 138 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 COPS9Q8WXC6 57 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 PPP3R2Q96LZ3 170 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 MAP3K1Q13233 1512 aa-1.82□□□□□ -2.7
PCM1-208ENST00000518877 EDC4Q6P2E9 1401 aaKnown RBP-1.83□□□□□ -2.7
PCM1-208ENST00000518877 DEFB110Q30KQ9 67 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 COMMD6Q7Z4G1 85 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 LINC00846Q9NV44 126 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 FOCADQ5VW36 1801 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 ADGRL2O95490 1459 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 SRCAPQ6ZRS2 3230 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 SCN7AQ01118 1682 aa-1.83□□□□□ -2.7
PCM1-208ENST00000518877 BCORQ6W2J9 1755 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 EHBP1L1Q8N3D4 1523 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 FGF7P21781 194 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 CATR1Q13166 79 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 SFTA2Q6UW10 78 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 C6orf201Q7Z4U5 140 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 ARL11Q969Q4 196 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 PHLPP1O60346 1717 aa-1.84□□□□□ -2.7
PCM1-208ENST00000518877 RGPD2P0DJD1 1756 aa-1.85□□□□□ -2.7
PCM1-208ENST00000518877 SPTY2D1-AS1A0A0U1RR47 76 aa-1.85□□□□□ -2.71
PCM1-208ENST00000518877 FAM223BA6NKX1 122 aa-1.85□□□□□ -2.71
PCM1-208ENST00000518877 SAA2P0DJI9 122 aaPredicted RBP-1.85□□□□□ -2.71
PCM1-208ENST00000518877 C5orf42Q9H799 3197 aa-1.85□□□□□ -2.71
PCM1-208ENST00000518877 RANBP2P49792 3224 aaKnown RBP-1.85□□□□□ -2.71
PCM1-208ENST00000518877 CHD7Q9P2D1 2997 aa-1.86□□□□□ -2.71
PCM1-208ENST00000518877 MT1HL1P0DM35 61 aa-1.86□□□□□ -2.71
PCM1-208ENST00000518877 Q56UQ5 140 aa-1.86□□□□□ -2.71
PCM1-208ENST00000518877 MBD5Q9P267 1494 aa-1.87□□□□□ -2.71
PCM1-208ENST00000518877 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.87□□□□□ -2.71
PCM1-208ENST00000518877 GNG7O60262 68 aa-1.87□□□□□ -2.71
PCM1-208ENST00000518877 ITPR1Q14643 2758 aa-1.87□□□□□ -2.71
PCM1-208ENST00000518877 CSMD1Q96PZ7 3565 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 A0A0G2JND7 137 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 LOC105371267A0A1B0GV96 52 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 OOSP1A8MZH6 123 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 H7BZZ5 65 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 TRAPPC2P0DI81 140 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 TRAPPC2BP0DI82 140 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 NMSQ5H8A3 153 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 C8orf59Q8N0T1 100 aaPredicted RBP-1.88□□□□□ -2.71
PCM1-208ENST00000518877 PFDN5Q99471 154 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 ALKQ9UM73 1620 aa-1.88□□□□□ -2.71
PCM1-208ENST00000518877 A0A087WVE0 104 aa-1.89□□□□□ -2.71
PCM1-208ENST00000518877 LINC00470Q9BZP3 86 aa-1.89□□□□□ -2.71
PCM1-208ENST00000518877 TRBV7-7A0A0K0K1E9 115 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 APOC2P02655 101 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 COX6CP09669 75 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 ARMS2P0C7Q2 107 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 PP6455Q8WZ26 134 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 MANBALQ9NQG1 85 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 PSENENQ9NZ42 101 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 MRC2Q9UBG0 1479 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 DIP2CQ9Y2E4 1556 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 COL6A5A8TX70 2615 aa-1.9□□□□□ -2.71
PCM1-208ENST00000518877 SMG1Q96Q15 3661 aaKnown RBP-1.9□□□□□ -2.71
PCM1-208ENST00000518877 MAPKBP1O60336 1514 aa-1.91□□□□□ -2.71
PCM1-208ENST00000518877 C4AP0C0L4 1744 aa-1.91□□□□□ -2.71
PCM1-208ENST00000518877 C4BP0C0L5 1744 aa-1.91□□□□□ -2.71
PCM1-208ENST00000518877 ABCA13Q86UQ4 5058 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 FAM25AB3EWG3 89 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 FAM25CB3EWG5 89 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 FAM25GB3EWG6 89 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 F6UZH7 168 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 H3BQF6 201 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 GNGT1P63211 74 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 SPENQ96T58 3664 aaKnown RBP-1.91□□□□□ -2.72
PCM1-208ENST00000518877 DNAH17Q9UFH2 4485 aa-1.91□□□□□ -2.72
PCM1-208ENST00000518877 CEP290O15078 2479 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 SPTBN5Q9NRC6 3674 aaKnown RBP-1.92□□□□□ -2.72
PCM1-208ENST00000518877 H0Y9P7 68 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 SELENOWP63302 87 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 Q0VG73 95 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 DEFB107AQ8IZN7 70 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.92□□□□□ -2.72
PCM1-208ENST00000518877 C12orf57Q99622 126 aa-1.92□□□□□ -2.72
PCM1-208ENST00000518877 TARBP1Q13395 1621 aaKnown RBP-1.92□□□□□ -2.72
PCM1-208ENST00000518877 A2ML1A8K2U0 1454 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 NDUFA3O95167 84 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 GNG11P61952 73 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 PRLHP81277 87 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 DPH3P1Q9H4G8 78 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 PRO1854Q9UHT4 67 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 DNAH5Q8TE73 4624 aa-1.93□□□□□ -2.72
PCM1-208ENST00000518877 KIF20BQ96Q89 1820 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 TOP2BQ02880 1626 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 TRRAPQ9Y4A5 3859 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 CUX1P39880 1505 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 C7orf77A4D0Y5 90 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 COX6B2Q6YFQ2 88 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 CEP295Q9C0D2 2601 aa-1.94□□□□□ -2.72
PCM1-208ENST00000518877 HSD52Q0P140 79 aa-1.95□□□□□ -2.72
PCM1-208ENST00000518877 VAMP8Q9BV40 100 aa-1.95□□□□□ -2.72
PCM1-208ENST00000518877 BPTFQ12830 3046 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 UBE2L5PA0A1B0GUS4 154 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 MT1EP04732 61 aa-1.96□□□□□ -2.72
PCM1-208ENST00000518877 UBE2L3P68036 154 aaKnown RBP-1.96□□□□□ -2.72
PCM1-208ENST00000518877 DNAH10Q8IVF4 4471 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms