RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 A0A1B0GXF2 115 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 NDUFS5O43920 106 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 CXCL5P42830 114 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 NMUP48645 174 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 S100A12P80511 92 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 DAND5Q8N907 189 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
CCDC6-203ENST00000518638 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 C6orf48Q9UBA6 75 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 UBE2D4Q9Y2X8 147 aa3.42□□□□□ -1.86
CCDC6-203ENST00000518638 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 M0R2T5 61 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 S100A1P23297 94 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 FCER1GP30273 86 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 RPL35P42766 123 aaKnown RBP3.41□□□□□ -1.86
CCDC6-203ENST00000518638 UBE2AP49459 152 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 C4orf26Q17RF5 130 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 FAM19A2Q8N3H0 131 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 TIMM21Q9BVV7 248 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
CCDC6-203ENST00000518638 TMEM242Q9NWH2 141 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 C22orf24Q9Y442 160 aa3.41□□□□□ -1.86
CCDC6-203ENST00000518638 TGIF2-C20orf24A0A0A6YYL0 155 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 TRBV27A0A0K0K1C4 114 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 TINCRA0A1B0GVN0 87 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 IFITM3Q01628 133 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
CCDC6-203ENST00000518638 PPP1R17O96001 155 aa3.39□□□□□ -1.87
CCDC6-203ENST00000518638 GNG4P50150 75 aa3.39□□□□□ -1.87
CCDC6-203ENST00000518638 CENPWQ5EE01 88 aa3.39□□□□□ -1.87
CCDC6-203ENST00000518638 RPL7L1Q6DKI1 246 aaKnown RBP3.39□□□□□ -1.87
CCDC6-203ENST00000518638 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
CCDC6-203ENST00000518638 ZNF727A8MUV8 499 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 PSMB2P49721 201 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
CCDC6-203ENST00000518638 HBBP68871 147 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 CCL20P78556 96 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 PMVKQ15126 192 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
CCDC6-203ENST00000518638 Q6ZUT4 128 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 SLC51BQ86UW2 128 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 KCNRGQ8N5I3 272 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 MARVELD1Q9BSK0 173 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 RNASE7Q9H1E1 156 aaKnown RBP3.38□□□□□ -1.87
CCDC6-203ENST00000518638 MANBALQ9NQG1 85 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 PRO0628Q9UI54 55 aa3.38□□□□□ -1.87
CCDC6-203ENST00000518638 UMAD1C9J7I0 102 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 SPINK1P00995 79 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 FOXA3P55318 350 aaPredicted RBP3.37□□□□□ -1.87
CCDC6-203ENST00000518638 DEFA1P59665 94 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 NDUFA5Q16718 116 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 LINC00299Q6ZSB3 139 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 SFT2D1Q8WV19 159 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 GNB1LQ9BYB4 327 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 SPANXA1Q9NS26 97 aa3.37□□□□□ -1.87
CCDC6-203ENST00000518638 CKS1BP61024 79 aa3.36□□□□□ -1.87
CCDC6-203ENST00000518638 RPS29P62273 56 aaKnown RBP3.36□□□□□ -1.87
CCDC6-203ENST00000518638 MRPS36P82909 103 aaKnown RBP3.36□□□□□ -1.87
CCDC6-203ENST00000518638 MBD3L1Q8WWY6 194 aa3.36□□□□□ -1.87
CCDC6-203ENST00000518638 S100ZQ8WXG8 99 aa3.36□□□□□ -1.87
CCDC6-203ENST00000518638 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 C8orf87E5RJ46 101 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 PDE6DO43924 150 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 G0S2P27469 103 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 RBM12B-AS1Q9P1G2 102 aa3.35□□□□□ -1.87
CCDC6-203ENST00000518638 TRBV20OR9-2A0A075B6H5 130 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 C2orf82Q6UX34 121 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 Q8IZM0 81 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 C3orf22Q8N5N4 141 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 FAM213BQ8TBF2 198 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 TMEM191AQ9H0A3 160 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 XAGE1AQ9HD64 81 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 BATF3Q9NR55 127 aa3.34□□□□□ -1.87
CCDC6-203ENST00000518638 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.87
CCDC6-203ENST00000518638 FXYD6-FXYD2A0A087WZ82 144 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 A0A1B0GV50 99 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 A8MWL6 223 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 TMEM238C9JI98 176 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 SLC25A20O43772 301 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
CCDC6-203ENST00000518638 F8VRH5 84 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
CCDC6-203ENST00000518638 PRLHP81277 87 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 PCP2Q8IVA1 136 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 PLEKHB2Q96CS7 222 aa3.32□□□□□ -1.88
CCDC6-203ENST00000518638 C20orf78Q9BR46 151 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms