RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 IL7P13232 177 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 FCER1GP30273 86 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 AKR1C8PQ5T2L2 129 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 MRPL52Q86TS9 123 aaKnown RBP1.67□□□□□ -2.14
PABPC1-206ENST00000518293 FAM19A2Q8N3H0 131 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 SPANXA2-OT1Q8N9U9 137 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 PPP1R1CQ8WVI7 109 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 RETNLBQ9BQ08 111 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 CDC42SE2Q9NRR3 84 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
PABPC1-206ENST00000518293 TGIF2-C20orf24A0A0A6YYL0 155 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 C7orf77A4D0Y5 90 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 SDHAF1A6NFY7 115 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 NDUFC2-KCTD14E9PQ53 114 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 SSNA1O43805 119 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 BCE1O60756 84 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 ENKURQ8TC29 256 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 ORAOV1Q8WV07 137 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 BORCS7Q96B45 105 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 SMIM12Q96EX1 92 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 SMDT1Q9H4I9 107 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 ST20Q9HBF5 79 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 TP73-AS1Q9UF72 201 aa1.66□□□□□ -2.14
PABPC1-206ENST00000518293 TRAV13-1A0A0B4J241 112 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 MAP1LC3B2A6NCE7 125 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 SIX6O95475 246 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 SPINK1P00995 79 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 IGLC6P0CF74 106 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 DEFA3P59666 94 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 CKS1BP61024 79 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 CD164Q04900 197 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 C4orf26Q17RF5 130 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 LYZL1Q6UWQ5 148 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 COX6B2Q6YFQ2 88 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 GATD1Q8NB37 220 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 TIMM21Q9BVV7 248 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 GNB1LQ9BYB4 327 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 MAP1LC3BQ9GZQ8 125 aa1.65□□□□□ -2.15
PABPC1-206ENST00000518293 IGHV3OR16-9A0A0B4J2B5 98 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 A0A1B0GXF2 115 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 INMT-MINDY4F8WBC2 141 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 PLA2G10O15496 165 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 GATCO43716 136 aaKnown RBP1.64□□□□□ -2.15
PABPC1-206ENST00000518293 P0C880 135 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 GNG4P50150 75 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 RPL23P62829 140 aaKnown RBP1.64□□□□□ -2.15
PABPC1-206ENST00000518293 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 UNQ6190/PRO20217Q6UXQ8 127 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 C9orf62Q8N4C0 152 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 C22orf24Q9Y442 160 aa1.64□□□□□ -2.15
PABPC1-206ENST00000518293 ZNF706Q9Y5V0 76 aaPredicted RBP1.64□□□□□ -2.15
PABPC1-206ENST00000518293 TRBV27A0A0K0K1C4 114 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 ZNF727A8MUV8 499 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 UMAD1C9J7I0 102 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 SLC25A20O43772 301 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 UPK1BO75841 260 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 RPL35P42766 123 aaKnown RBP1.63□□□□□ -2.15
PABPC1-206ENST00000518293 HBBP68871 147 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 C6orf99Q4VX62 202 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 KCNRGQ8N5I3 272 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 RPL39LQ96EH5 51 aaKnown RBP1.63□□□□□ -2.15
PABPC1-206ENST00000518293 MARVELD1Q9BSK0 173 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 TMEM242Q9NWH2 141 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 RBM12B-AS1Q9P1G2 102 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 C6orf48Q9UBA6 75 aa1.63□□□□□ -2.15
PABPC1-206ENST00000518293 TINCRA0A1B0GVN0 87 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 A8MWL6 223 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 C8orf87E5RJ46 101 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 PDE6DO43924 150 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 POLR2KP53803 58 aaKnown RBP1.62□□□□□ -2.15
PABPC1-206ENST00000518293 FOXA3P55318 350 aaPredicted RBP1.62□□□□□ -2.15
PABPC1-206ENST00000518293 H2BFSP57053 126 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 DEFA1P59665 94 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 RPS29P62273 56 aaKnown RBP1.62□□□□□ -2.15
PABPC1-206ENST00000518293 SEC11AP67812 179 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 CCL20P78556 96 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 MRPS36P82909 103 aaKnown RBP1.62□□□□□ -2.15
PABPC1-206ENST00000518293 CENPWQ5EE01 88 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 SFT2D1Q8WV19 159 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 S100ZQ8WXG8 99 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 C2orf88Q9BSF0 95 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 CNFNQ9BYD5 112 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 SPANXA1Q9NS26 97 aa1.62□□□□□ -2.15
PABPC1-206ENST00000518293 MUC17Q685J3 4493 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 TRBV20OR9-2A0A075B6H5 130 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 F8VRH5 84 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 NDUFS5O43920 106 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 IFI27P40305 119 aaPredicted RBP1.61□□□□□ -2.15
PABPC1-206ENST00000518293 MT1HP80294 61 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 S100A12P80511 92 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 RGS21Q2M5E4 152 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 RPL7L1Q6DKI1 246 aaKnown RBP1.61□□□□□ -2.15
PABPC1-206ENST00000518293 LINC00299Q6ZSB3 139 aa1.61□□□□□ -2.15
PABPC1-206ENST00000518293 Q6ZUT4 128 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms