RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
PVT1-205ENST00000517790 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
PVT1-205ENST00000517790 TMEM14AQ9Y6G1 99 aa3.56□□□□□ -1.84
PVT1-205ENST00000517790 APOBP04114 4563 aaKnown RBP3.56□□□□□ -1.84
PVT1-205ENST00000517790 IGLV2-18A0A075B6J9 118 aa3.55□□□□□ -1.84
PVT1-205ENST00000517790 RPL27AP46776 148 aaKnown RBP3.55□□□□□ -1.84
PVT1-205ENST00000517790 EIF4EBP1Q13541 118 aaPredicted RBP3.55□□□□□ -1.84
PVT1-205ENST00000517790 ZNF818PQ6ZRF7 136 aa3.55□□□□□ -1.84
PVT1-205ENST00000517790 Q8IYB0 196 aa3.55□□□□□ -1.84
PVT1-205ENST00000517790 LINC00269Q8N2A0 174 aa3.55□□□□□ -1.84
PVT1-205ENST00000517790 ZNF355PQ9NSJ1 428 aa3.55□□□□□ -1.84
PVT1-205ENST00000517790 IGHV7-4-1A0A0J9YVY3 117 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 TMEM30CPA0ZSE6 113 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 ZNF815PA8K554 130 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 CFC1P0CG37 223 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 FXYD7P58549 80 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 C20orf203Q8NBC4 194 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 LINC00467Q9BRT7 94 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 TMEM167BQ9NRX6 74 aa3.54□□□□□ -1.84
PVT1-205ENST00000517790 LRP1BQ9NZR2 4599 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 TMEM223A0PJW6 202 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 A6NN06 94 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 F8WEM9 126 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 NDUFA3O95167 84 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 PPP1R17O96001 155 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 DNAL4O96015 105 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 ZNF137PP52743 207 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 KISS1Q15726 138 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 RNASE13Q5GAN3 156 aaKnown RBP3.53□□□□□ -1.84
PVT1-205ENST00000517790 Q6ZR54 194 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 FAM223AQ8IWN6 122 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 Q8N377 158 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 FAM167A-AS1Q96KT0 104 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 R4GMQ9 66 aa3.53□□□□□ -1.84
PVT1-205ENST00000517790 BPY2O14599 106 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 LEPROTO15243 131 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 MIFP14174 115 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 Q1RN00 199 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 PIGYQ3MUY2 71 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 LYPD5Q6UWN5 251 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 CYYR1Q96J86 154 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
PVT1-205ENST00000517790 RPP21Q9H633 154 aaKnown RBP3.52□□□□□ -1.85
PVT1-205ENST00000517790 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 APELAP0DMC3 54 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
PVT1-205ENST00000517790 LYZP61626 148 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 PATE2Q6UY27 113 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 LITAFQ99732 161 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 CHCHD7Q9BUK0 85 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 UBE2D4Q9Y2X8 147 aa3.51□□□□□ -1.85
PVT1-205ENST00000517790 IGLV11-55A0A075B6I3 123 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 H7C423 109 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
PVT1-205ENST00000517790 NPPCP23582 126 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 SYCNQ0VAF6 134 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 FXYD3Q14802 87 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 C1orf134Q5TEV5 83 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 Q6ZTC4 211 aa3.5□□□□□ -1.85
PVT1-205ENST00000517790 IGHV3-49A0A0A0MS15 119 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 H3BUA1 57 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 GNRH2O43555 120 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 SPINK4O60575 86 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 IGKV1-16P04430 117 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 P0C879 139 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 SAA2P0DJI9 122 aaPredicted RBP3.49□□□□□ -1.85
PVT1-205ENST00000517790 KRTAP10-2P60368 255 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 RPL39P5Q59GN2 51 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 ZNF833PQ6ZTB9 187 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 LYZL2Q7Z4W2 148 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 C15orf56Q8N910 161 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 PSENENQ9NZ42 101 aa3.49□□□□□ -1.85
PVT1-205ENST00000517790 TRAV10A0A0B4J240 114 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 HIGD1CA8MV81 97 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 IGHV3-33P01772 117 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 C9orf116Q5BN46 136 aaPredicted RBP3.48□□□□□ -1.85
PVT1-205ENST00000517790 Q5VSD8 79 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 CASC2Q6XLA1 102 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 USMG5Q96IX5 58 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 S4R3C0 116 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 FAT1Q14517 4588 aa3.48□□□□□ -1.85
PVT1-205ENST00000517790 IGHV3-21A0A0B4J1V1 117 aa3.47□□□□□ -1.85
PVT1-205ENST00000517790 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
PVT1-205ENST00000517790 LINC01546A6NGU7 62 aa3.47□□□□□ -1.85
PVT1-205ENST00000517790 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
PVT1-205ENST00000517790 K7EMI3 77 aa3.47□□□□□ -1.85
PVT1-205ENST00000517790 INSP01308 110 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms