RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 K7EQZ3 153 aa0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 NDUFB1O75438 58 aa0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 PRB3Q04118 309 aaPredicted RBP0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 KRTAP5-4Q6L8H1 288 aa0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 MROH1Q8NDA8 1641 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 OBSCNQ5VST9 7968 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 ASXL1Q8IXJ9 1541 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 SPTY2D1-AS1A0A0U1RR47 76 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 COX8AP10176 69 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 Q8IZM0 81 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 CACNA1EQ15878 2313 aa0.75□□□□□ -2.29
SCARNA11.3-201ENST00000517276 C2CD3Q4AC94 2353 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 DEFB123Q8N688 67 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 GNG13Q9P2W3 67 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 USF3Q68DE3 2245 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 FMN2Q9NZ56 1722 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 SPTBN2O15020 2390 aa0.74□□□□□ -2.29
SCARNA11.3-201ENST00000517276 UBR3Q6ZT12 1888 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 ITSN1Q15811 1721 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 DOT1LQ8TEK3 1739 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 TTC28Q96AY4 2481 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 DIP2AQ14689 1571 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 CDC42BPGQ6DT37 1551 aa0.73□□□□□ -2.29
SCARNA11.3-201ENST00000517276 F8P00451 2351 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 LRRC37AA6NMS7 1700 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 ABCA9Q8IUA7 1624 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 A0A087WWC5 75 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 CPSF4LA6NMK7 179 aaKnown RBP0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 ATXN8Q156A1 80 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 USMG5Q96IX5 58 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 KRTAP4-4Q9BYR3 166 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 EFCAB5A4FU69 1503 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 LMTK2Q8IWU2 1503 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 POLR1AO95602 1720 aaPredicted RBP0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 TIAM2Q8IVF5 1701 aa0.72□□□□□ -2.29
SCARNA11.3-201ENST00000517276 INO80Q9ULG1 1556 aaPredicted RBP0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 LCE6AA0A183 80 aa0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 I3L3M4 83 aa0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 C3orf79P0CE67 100 aa0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 KRTAP5-7Q6L8G8 165 aa0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 MRPL34Q9BQ48 92 aaKnown RBP0.71□□□□□ -2.3
SCARNA11.3-201ENST00000517276 NDUFA4O00483 81 aa0.7□□□□□ -2.3
SCARNA11.3-201ENST00000517276 ENHOQ6UWT2 76 aa0.7□□□□□ -2.3
SCARNA11.3-201ENST00000517276 HFM1A2PYH4 1435 aa0.7□□□□□ -2.3
SCARNA11.3-201ENST00000517276 QSER1Q2KHR3 1735 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 RICTORQ6R327 1708 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 POLQO75417 2590 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 SFTA3P0C7M3 94 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 COX6B1P14854 86 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 SPRR1AP35321 89 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 RPL38P63173 70 aaKnown RBP0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 LELP1Q5T871 98 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 KRTAP4-3Q9BYR4 195 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 APLNQ9ULZ1 77 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 PTPRZ1P23471 2315 aaPredicted RBP0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 CFAP43Q8NDM7 1665 aa0.69□□□□□ -2.3
SCARNA11.3-201ENST00000517276 PIEZO2Q9H5I5 2752 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 BCORQ6W2J9 1755 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 SPTBN1Q01082 2364 aaKnown RBP0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 SPRR1BP22528 89 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 FXYD6Q9H0Q3 95 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 ANKRD50Q9ULJ7 1429 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 FRAS1Q86XX4 4008 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 WIZO95785 1651 aa0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 COL14A1Q05707 1796 aaKnown RBP0.68□□□□□ -2.3
SCARNA11.3-201ENST00000517276 KLK9Q2XQG4 91 aa0.67□□□□□ -2.3
SCARNA11.3-201ENST00000517276 ANK2Q01484 3957 aa0.67□□□□□ -2.3
SCARNA11.3-201ENST00000517276 BIVM-ERCC5R4GMW8 1640 aa0.67□□□□□ -2.3
SCARNA11.3-201ENST00000517276 PARP4Q9UKK3 1724 aaKnown RBP0.67□□□□□ -2.3
SCARNA11.3-201ENST00000517276 MUC19Q7Z5P9 8384 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 BDP1A6H8Y1 2624 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 LINC01549A6NIU2 74 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 ZNF292O60281 2723 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 EIF2AK4Q9P2K8 1649 aaKnown RBP0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 TNCP24821 2201 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 ABCA12Q86UK0 2595 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 RALGAPBQ86X10 1494 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 TSC2P49815 1807 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
SCARNA11.3-201ENST00000517276 PLCH1Q4KWH8 1693 aa0.65□□□□□ -2.3
SCARNA11.3-201ENST00000517276 CCDC180Q9P1Z9 1646 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 NRAPQ86VF7 1730 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 NDUFA3O95167 84 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 H1FX-AS1Q4G0G2 97 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 Q5VSD8 79 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 DEFB105AQ8NG35 78 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CNOT1A5YKK6 2376 aaKnown RBP0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 TRIOBPQ9H2D6 2365 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 GVINP1Q7Z2Y8 2422 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 PIEZO1Q92508 2521 aa0.65□□□□□ -2.31
SCARNA11.3-201ENST00000517276 KRTAP19-3Q7Z4W3 81 aa0.64□□□□□ -2.31
SCARNA11.3-201ENST00000517276 PREX1Q8TCU6 1659 aa0.64□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CICQ96RK0 1608 aaPredicted RBP0.64□□□□□ -2.31
SCARNA11.3-201ENST00000517276 UBL5Q9BZL1 73 aa0.63□□□□□ -2.31
SCARNA11.3-201ENST00000517276 NESP48681 1621 aa0.63□□□□□ -2.31
SCARNA11.3-201ENST00000517276 CCL22O00626 93 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms