RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
DDR1-280ENST00000515881 PRLHP81277 87 aa11.53□□□□□ -0.56
DDR1-280ENST00000515881 TYMSOSQ8TAI1 123 aa11.53□□□□□ -0.56
DDR1-280ENST00000515881 ANAPC11Q9NYG5 84 aa11.53□□□□□ -0.56
DDR1-280ENST00000515881 FAM19A1Q7Z5A9 133 aa11.52□□□□□ -0.57
DDR1-280ENST00000515881 RNF213Q63HN8 5207 aa11.51□□□□□ -0.57
DDR1-280ENST00000515881 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
DDR1-280ENST00000515881 M0R378 163 aa11.51□□□□□ -0.57
DDR1-280ENST00000515881 TRGC2P03986 189 aa11.51□□□□□ -0.57
DDR1-280ENST00000515881 PRR4Q16378 134 aa11.51□□□□□ -0.57
DDR1-280ENST00000515881 TSPAN13O95857 204 aa11.5□□□□□ -0.57
DDR1-280ENST00000515881 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
DDR1-280ENST00000515881 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
DDR1-280ENST00000515881 KRTAP13-2Q52LG2 175 aa11.48□□□□□ -0.57
DDR1-280ENST00000515881 H0Y8G0 127 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 SERF1AO75920 110 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 LINC00310P59036 64 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 HERV-K104P63124 156 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 LPAP08519 4548 aa11.47□□□□□ -0.57
DDR1-280ENST00000515881 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
DDR1-280ENST00000515881 LEPROTL1O95214 131 aa11.46□□□□□ -0.57
DDR1-280ENST00000515881 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
DDR1-280ENST00000515881 BOD1L2Q8IYS8 172 aa11.44□□□□□ -0.58
DDR1-280ENST00000515881 MIR7-3HGQ8N6C7 128 aa11.44□□□□□ -0.58
DDR1-280ENST00000515881 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
DDR1-280ENST00000515881 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
DDR1-280ENST00000515881 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
DDR1-280ENST00000515881 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
DDR1-280ENST00000515881 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
DDR1-280ENST00000515881 PLNP26678 52 aa11.41□□□□□ -0.58
DDR1-280ENST00000515881 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
DDR1-280ENST00000515881 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
DDR1-280ENST00000515881 NCR3O14931 201 aa11.4□□□□□ -0.58
DDR1-280ENST00000515881 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
DDR1-280ENST00000515881 LINC00304Q8N9R0 145 aa11.4□□□□□ -0.58
DDR1-280ENST00000515881 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
DDR1-280ENST00000515881 COLCA2A8K830 154 aa11.39□□□□□ -0.59
DDR1-280ENST00000515881 PRYO14603 147 aa11.39□□□□□ -0.59
DDR1-280ENST00000515881 LEPROTO15243 131 aa11.39□□□□□ -0.59
DDR1-280ENST00000515881 FABP4P15090 132 aa11.38□□□□□ -0.59
DDR1-280ENST00000515881 DPM2O94777 84 aa11.37□□□□□ -0.59
DDR1-280ENST00000515881 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
DDR1-280ENST00000515881 KCNQ1DNQ9H478 68 aa11.36□□□□□ -0.59
DDR1-280ENST00000515881 J3QQQ9 107 aa11.35□□□□□ -0.59
DDR1-280ENST00000515881 SPRR1AP35321 89 aa11.35□□□□□ -0.59
DDR1-280ENST00000515881 HERVK_113P61574 105 aa11.35□□□□□ -0.59
DDR1-280ENST00000515881 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
DDR1-280ENST00000515881 SPRR4Q96PI1 79 aa11.35□□□□□ -0.59
DDR1-280ENST00000515881 TRBV10-3A0A0K0K1G6 114 aa11.34□□□□□ -0.59
DDR1-280ENST00000515881 IGKCP01834 107 aa11.34□□□□□ -0.59
DDR1-280ENST00000515881 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
DDR1-280ENST00000515881 DAND5Q8N907 189 aa11.34□□□□□ -0.59
DDR1-280ENST00000515881 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.6
DDR1-280ENST00000515881 NMUP48645 174 aa11.33□□□□□ -0.6
DDR1-280ENST00000515881 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.6
DDR1-280ENST00000515881 ZNF706Q9Y5V0 76 aaPredicted RBP11.33□□□□□ -0.6
DDR1-280ENST00000515881 KRTAP4-16G5E9R7 235 aaPredicted RBP11.32□□□□□ -0.6
DDR1-280ENST00000515881 RETNLBQ9BQ08 111 aa11.32□□□□□ -0.6
DDR1-280ENST00000515881 ETDCA0A1B0GVM5 59 aa11.31□□□□□ -0.6
DDR1-280ENST00000515881 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
DDR1-280ENST00000515881 CTAG1AP78358 180 aa11.31□□□□□ -0.6
DDR1-280ENST00000515881 S100A12P80511 92 aa11.29□□□□□ -0.6
DDR1-280ENST00000515881 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
DDR1-280ENST00000515881 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
DDR1-280ENST00000515881 DDTP30046 118 aa11.27□□□□□ -0.61
DDR1-280ENST00000515881 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
DDR1-280ENST00000515881 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.61
DDR1-280ENST00000515881 B5MCH6 92 aa11.25□□□□□ -0.61
DDR1-280ENST00000515881 E9PLD3 99 aa11.25□□□□□ -0.61
DDR1-280ENST00000515881 SPAG11AQ6PDA7 123 aa11.25□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 NDUFC2O95298 119 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 PPDPFQ9H3Y8 114 aa11.24□□□□□ -0.61
DDR1-280ENST00000515881 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
DDR1-280ENST00000515881 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
DDR1-280ENST00000515881 IGLV6-57P01721 117 aa11.22□□□□□ -0.61
DDR1-280ENST00000515881 LINC00483Q53H64 154 aa11.22□□□□□ -0.61
DDR1-280ENST00000515881 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.61
DDR1-280ENST00000515881 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
DDR1-280ENST00000515881 ADAMTSL4-AS1Q5T5F5 129 aa11.21□□□□□ -0.61
DDR1-280ENST00000515881 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
DDR1-280ENST00000515881 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
DDR1-280ENST00000515881 ERC2-IT1O76042 136 aa11.2□□□□□ -0.62
DDR1-280ENST00000515881 NPC2P61916 151 aa11.2□□□□□ -0.62
DDR1-280ENST00000515881 TPRXLQ17RH7 258 aa11.2□□□□□ -0.62
DDR1-280ENST00000515881 Q6ZRX8 168 aa11.2□□□□□ -0.62
DDR1-280ENST00000515881 Q8NBF4 154 aa11.2□□□□□ -0.62
DDR1-280ENST00000515881 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
DDR1-280ENST00000515881 GAGE2AQ6NT46 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms