RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 YPEL4Q96NS1 127 aa8.08□□□□□ -1.12
TCOF1-215ENST00000515516 TMEM126AQ9H061 195 aa8.08□□□□□ -1.12
TCOF1-215ENST00000515516 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
TCOF1-215ENST00000515516 TMEM238C9JI98 176 aa8.07□□□□□ -1.12
TCOF1-215ENST00000515516 FAM229BQ4G0N7 80 aa8.07□□□□□ -1.12
TCOF1-215ENST00000515516 ANAPC11Q9NYG5 84 aa8.07□□□□□ -1.12
TCOF1-215ENST00000515516 PRLHP81277 87 aa8.06□□□□□ -1.12
TCOF1-215ENST00000515516 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
TCOF1-215ENST00000515516 IGKV2D-26A0A0A0MRZ7 120 aa8.05□□□□□ -1.12
TCOF1-215ENST00000515516 LINC00587B1AMM8 73 aa8.05□□□□□ -1.12
TCOF1-215ENST00000515516 HERV-K104P63124 156 aa8.05□□□□□ -1.12
TCOF1-215ENST00000515516 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
TCOF1-215ENST00000515516 FAM19A2Q8N3H0 131 aa8.05□□□□□ -1.12
TCOF1-215ENST00000515516 H0Y8G0 127 aa8.04□□□□□ -1.12
TCOF1-215ENST00000515516 M0R378 163 aa8.04□□□□□ -1.12
TCOF1-215ENST00000515516 SMIM13P0DJ93 91 aa8.04□□□□□ -1.12
TCOF1-215ENST00000515516 RNF213Q63HN8 5207 aa8.04□□□□□ -1.12
TCOF1-215ENST00000515516 MAP1LC3CQ9BXW4 147 aa8.03□□□□□ -1.12
TCOF1-215ENST00000515516 MYMXA0A1B0GTQ4 84 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 TRGC2P03986 189 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 BOD1L2Q8IYS8 172 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 Q8NDZ9 215 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
TCOF1-215ENST00000515516 LPAP08519 4548 aa8.01□□□□□ -1.13
TCOF1-215ENST00000515516 KRTAP13-2Q52LG2 175 aa8.01□□□□□ -1.13
TCOF1-215ENST00000515516 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
TCOF1-215ENST00000515516 LINC00304Q8N9R0 145 aa8.01□□□□□ -1.13
TCOF1-215ENST00000515516 S100A12P80511 92 aa8□□□□□ -1.13
TCOF1-215ENST00000515516 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
TCOF1-215ENST00000515516 HSPB8Q9UJY1 196 aa8□□□□□ -1.13
TCOF1-215ENST00000515516 PLNP26678 52 aa7.99□□□□□ -1.13
TCOF1-215ENST00000515516 PRYO14603 147 aa7.98□□□□□ -1.13
TCOF1-215ENST00000515516 NCR3O14931 201 aa7.98□□□□□ -1.13
TCOF1-215ENST00000515516 SERF1AO75920 110 aa7.98□□□□□ -1.13
TCOF1-215ENST00000515516 HERVK_113P61574 105 aa7.98□□□□□ -1.13
TCOF1-215ENST00000515516 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
TCOF1-215ENST00000515516 LEPROTO15243 131 aa7.97□□□□□ -1.13
TCOF1-215ENST00000515516 FABP4P15090 132 aa7.97□□□□□ -1.13
TCOF1-215ENST00000515516 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
TCOF1-215ENST00000515516 DPM2O94777 84 aa7.96□□□□□ -1.14
TCOF1-215ENST00000515516 CTAG1AP78358 180 aa7.96□□□□□ -1.14
TCOF1-215ENST00000515516 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
TCOF1-215ENST00000515516 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
TCOF1-215ENST00000515516 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
TCOF1-215ENST00000515516 J3QQQ9 107 aa7.94□□□□□ -1.14
TCOF1-215ENST00000515516 IGKCP01834 107 aa7.94□□□□□ -1.14
TCOF1-215ENST00000515516 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
TCOF1-215ENST00000515516 NMUP48645 174 aa7.94□□□□□ -1.14
TCOF1-215ENST00000515516 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
TCOF1-215ENST00000515516 MIEN1Q9BRT3 115 aa7.94□□□□□ -1.14
TCOF1-215ENST00000515516 TRBV10-3A0A0K0K1G6 114 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 LINC00310P59036 64 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 SPAG11AQ6PDA7 123 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 C3orf22Q8N5N4 141 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
TCOF1-215ENST00000515516 SPRR1AP35321 89 aa7.92□□□□□ -1.14
TCOF1-215ENST00000515516 DAND5Q8N907 189 aa7.92□□□□□ -1.14
TCOF1-215ENST00000515516 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
TCOF1-215ENST00000515516 COLCA2A8K830 154 aa7.91□□□□□ -1.14
TCOF1-215ENST00000515516 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
TCOF1-215ENST00000515516 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
TCOF1-215ENST00000515516 DDTP30046 118 aa7.9□□□□□ -1.14
TCOF1-215ENST00000515516 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
TCOF1-215ENST00000515516 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
TCOF1-215ENST00000515516 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
TCOF1-215ENST00000515516 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
TCOF1-215ENST00000515516 S100A7L2Q5SY68 101 aa7.89□□□□□ -1.15
TCOF1-215ENST00000515516 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
TCOF1-215ENST00000515516 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
TCOF1-215ENST00000515516 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
TCOF1-215ENST00000515516 B5MCH6 92 aa7.87□□□□□ -1.15
TCOF1-215ENST00000515516 NDUFC2O95298 119 aa7.87□□□□□ -1.15
TCOF1-215ENST00000515516 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
TCOF1-215ENST00000515516 Q8NBF4 154 aa7.86□□□□□ -1.15
TCOF1-215ENST00000515516 E9PLD3 99 aa7.85□□□□□ -1.15
TCOF1-215ENST00000515516 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
TCOF1-215ENST00000515516 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
TCOF1-215ENST00000515516 NPC2P61916 151 aa7.84□□□□□ -1.15
TCOF1-215ENST00000515516 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
TCOF1-215ENST00000515516 LINC00483Q53H64 154 aa7.84□□□□□ -1.15
TCOF1-215ENST00000515516 CBY1Q9Y3M2 126 aa7.84□□□□□ -1.15
TCOF1-215ENST00000515516 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
TCOF1-215ENST00000515516 SYS1-DBNDD2H3BUS1 97 aa7.83□□□□□ -1.16
TCOF1-215ENST00000515516 IGLV6-57P01721 117 aa7.83□□□□□ -1.16
TCOF1-215ENST00000515516 HINT1P49773 126 aaPredicted RBP7.83□□□□□ -1.16
TCOF1-215ENST00000515516 Q6ZRX8 168 aa7.83□□□□□ -1.16
TCOF1-215ENST00000515516 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
TCOF1-215ENST00000515516 SPINK1P00995 79 aa7.82□□□□□ -1.16
TCOF1-215ENST00000515516 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 ERC2-IT1O76042 136 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
TCOF1-215ENST00000515516 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms