RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 LRP2P98164 4655 aa14.6□□□□□ -0.07
SNF8-213ENST00000514929 LINC00310P59036 64 aa14.59□□□□□ -0.07
SNF8-213ENST00000514929 COLCA2A8K830 154 aa14.57□□□□□ -0.08
SNF8-213ENST00000514929 ATP6V1G1O75348 118 aa14.57□□□□□ -0.08
SNF8-213ENST00000514929 KRTAP13-1Q8IUC0 172 aa14.57□□□□□ -0.08
SNF8-213ENST00000514929 Q8NDZ9 215 aa14.57□□□□□ -0.08
SNF8-213ENST00000514929 MEIG1Q5JSS6 88 aa14.56□□□□□ -0.08
SNF8-213ENST00000514929 SMIM13P0DJ93 91 aa14.55□□□□□ -0.08
SNF8-213ENST00000514929 TMEM126AQ9H061 195 aa14.55□□□□□ -0.08
SNF8-213ENST00000514929 HSPB8Q9UJY1 196 aa14.55□□□□□ -0.08
SNF8-213ENST00000514929 TMEM238C9JI98 176 aa14.54□□□□□ -0.08
SNF8-213ENST00000514929 FABP4P15090 132 aa14.54□□□□□ -0.08
SNF8-213ENST00000514929 HERV-K104P63124 156 aa14.54□□□□□ -0.08
SNF8-213ENST00000514929 FAM19A1Q7Z5A9 133 aa14.53□□□□□ -0.08
SNF8-213ENST00000514929 NDUFA12Q9UI09 145 aa14.53□□□□□ -0.08
SNF8-213ENST00000514929 A0A087X002 238 aa14.52□□□□□ -0.09
SNF8-213ENST00000514929 CRYGAP11844 174 aa14.52□□□□□ -0.09
SNF8-213ENST00000514929 PRLHP81277 87 aa14.52□□□□□ -0.09
SNF8-213ENST00000514929 MYMXA0A1B0GTQ4 84 aa14.51□□□□□ -0.09
SNF8-213ENST00000514929 PLNP26678 52 aa14.51□□□□□ -0.09
SNF8-213ENST00000514929 LINC00587B1AMM8 73 aa14.5□□□□□ -0.09
SNF8-213ENST00000514929 M0R378 163 aa14.5□□□□□ -0.09
SNF8-213ENST00000514929 MIR7-3HGQ8N6C7 128 aa14.5□□□□□ -0.09
SNF8-213ENST00000514929 BOD1L2Q8IYS8 172 aa14.49□□□□□ -0.09
SNF8-213ENST00000514929 ANAPC11Q9NYG5 84 aa14.49□□□□□ -0.09
SNF8-213ENST00000514929 LEPROTO15243 131 aa14.48□□□□□ -0.09
SNF8-213ENST00000514929 DPM2O94777 84 aa14.48□□□□□ -0.09
SNF8-213ENST00000514929 TYMSOSQ8TAI1 123 aa14.48□□□□□ -0.09
SNF8-213ENST00000514929 MAP1LC3CQ9BXW4 147 aa14.48□□□□□ -0.09
SNF8-213ENST00000514929 PLEKHB2Q96CS7 222 aa14.47□□□□□ -0.09
SNF8-213ENST00000514929 PMCHL2Q9BQD1 86 aa14.47□□□□□ -0.09
SNF8-213ENST00000514929 TSPEAR-AS2P59090 65 aa14.46□□□□□ -0.09
SNF8-213ENST00000514929 HERVK_113P61574 105 aa14.46□□□□□ -0.09
SNF8-213ENST00000514929 IGKCP01834 107 aa14.44□□□□□ -0.1
SNF8-213ENST00000514929 NCR3O14931 201 aa14.43□□□□□ -0.1
SNF8-213ENST00000514929 FAM229BQ4G0N7 80 aa14.43□□□□□ -0.1
SNF8-213ENST00000514929 J3QQQ9 107 aa14.42□□□□□ -0.1
SNF8-213ENST00000514929 TSPAN13O95857 204 aa14.42□□□□□ -0.1
SNF8-213ENST00000514929 PRR4Q16378 134 aa14.41□□□□□ -0.1
SNF8-213ENST00000514929 HIGD2AQ9BW72 106 aa14.41□□□□□ -0.1
SNF8-213ENST00000514929 IGKV2D-26A0A0A0MRZ7 120 aa14.39□□□□□ -0.11
SNF8-213ENST00000514929 PRYO14603 147 aa14.39□□□□□ -0.11
SNF8-213ENST00000514929 LGALS3P17931 250 aaKnown RBP14.39□□□□□ -0.11
SNF8-213ENST00000514929 KRTAP13-2Q52LG2 175 aa14.39□□□□□ -0.11
SNF8-213ENST00000514929 NMUP48645 174 aa14.38□□□□□ -0.11
SNF8-213ENST00000514929 DAND5Q8N907 189 aa14.38□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
SNF8-213ENST00000514929 LPAP08519 4548 aa14.36□□□□□ -0.11
SNF8-213ENST00000514929 KCNQ1DNQ9H478 68 aa14.34□□□□□ -0.11
SNF8-213ENST00000514929 RNF213Q63HN8 5207 aa14.34□□□□□ -0.11
SNF8-213ENST00000514929 TRBV10-3A0A0K0K1G6 114 aa14.33□□□□□ -0.12
SNF8-213ENST00000514929 S100A12P80511 92 aa14.33□□□□□ -0.12
SNF8-213ENST00000514929 LINC00337Q8N6G1 96 aa14.33□□□□□ -0.12
SNF8-213ENST00000514929 MIEN1Q9BRT3 115 aa14.33□□□□□ -0.12
SNF8-213ENST00000514929 LOC107984156A0A0G2JMH3 177 aa14.32□□□□□ -0.12
SNF8-213ENST00000514929 SYS1-DBNDD2H3BUS1 97 aa14.32□□□□□ -0.12
SNF8-213ENST00000514929 ARL17AQ8IVW1 177 aa14.32□□□□□ -0.12
SNF8-213ENST00000514929 ETDCA0A1B0GVM5 59 aa14.31□□□□□ -0.12
SNF8-213ENST00000514929 SPRR1AP35321 89 aa14.31□□□□□ -0.12
SNF8-213ENST00000514929 LINC00304Q8N9R0 145 aa14.31□□□□□ -0.12
SNF8-213ENST00000514929 E9PLD3 99 aa14.3□□□□□ -0.12
SNF8-213ENST00000514929 SPRR4Q96PI1 79 aa14.29□□□□□ -0.12
SNF8-213ENST00000514929 ZNF706Q9Y5V0 76 aaPredicted RBP14.29□□□□□ -0.12
SNF8-213ENST00000514929 TRBV10-2A0A0K0K1G8 114 aa14.27□□□□□ -0.13
SNF8-213ENST00000514929 DDTP30046 118 aa14.27□□□□□ -0.13
SNF8-213ENST00000514929 SPANXB1Q9NS25 103 aaPredicted RBP14.27□□□□□ -0.13
SNF8-213ENST00000514929 A0A0J9YXY3 114 aa14.26□□□□□ -0.13
SNF8-213ENST00000514929 KRTAP4-16G5E9R7 235 aaPredicted RBP14.26□□□□□ -0.13
SNF8-213ENST00000514929 C3orf22Q8N5N4 141 aa14.25□□□□□ -0.13
SNF8-213ENST00000514929 SMCR5Q8TEV8 140 aa14.25□□□□□ -0.13
SNF8-213ENST00000514929 LINC01545Q5VT33 79 aa14.24□□□□□ -0.13
SNF8-213ENST00000514929 PET117Q6UWS5 81 aa14.24□□□□□ -0.13
SNF8-213ENST00000514929 NDUFC2O95298 119 aa14.23□□□□□ -0.13
SNF8-213ENST00000514929 NPC2P61916 151 aa14.23□□□□□ -0.13
SNF8-213ENST00000514929 S100A7L2Q5SY68 101 aa14.23□□□□□ -0.13
SNF8-213ENST00000514929 ADAMTSL4-AS1Q5T5F5 129 aa14.22□□□□□ -0.13
SNF8-213ENST00000514929 B5MCH6 92 aa14.2□□□□□ -0.14
SNF8-213ENST00000514929 SOSTDC1Q6X4U4 206 aa14.2□□□□□ -0.14
SNF8-213ENST00000514929 PPDPFQ9H3Y8 114 aa14.19□□□□□ -0.14
SNF8-213ENST00000514929 C3orf79P0CE67 100 aa14.18□□□□□ -0.14
SNF8-213ENST00000514929 RETNLBQ9BQ08 111 aa14.18□□□□□ -0.14
SNF8-213ENST00000514929 EIF4EBP3O60516 100 aaPredicted RBP14.17□□□□□ -0.14
SNF8-213ENST00000514929 IGLV6-57P01721 117 aa14.17□□□□□ -0.14
SNF8-213ENST00000514929 COA6Q5JTJ3 125 aaKnown RBP14.17□□□□□ -0.14
SNF8-213ENST00000514929 KRTDAPP60985 99 aa14.16□□□□□ -0.14
SNF8-213ENST00000514929 CTAG1AP78358 180 aa14.16□□□□□ -0.14
SNF8-213ENST00000514929 TRAV23DV6A0A075B6W5 121 aa14.14□□□□□ -0.15
SNF8-213ENST00000514929 ZNF815PA8K554 130 aa14.14□□□□□ -0.15
SNF8-213ENST00000514929 SPAG11AQ6PDA7 123 aa14.14□□□□□ -0.15
SNF8-213ENST00000514929 Q6ZRX8 168 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms