RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 SEC61BP60468 96 aaKnown RBP12.96□□□□□ -0.33
RUFY3-213ENST00000514898 IGLC3P0DOY3 106 aa12.95□□□□□ -0.34
RUFY3-213ENST00000514898 C4orf48Q5BLP8 95 aa12.95□□□□□ -0.34
RUFY3-213ENST00000514898 SPINK1P00995 79 aa12.92□□□□□ -0.34
RUFY3-213ENST00000514898 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
RUFY3-213ENST00000514898 ZNF625Q96I27 306 aaPredicted RBP12.92□□□□□ -0.34
RUFY3-213ENST00000514898 A0A1B0GVG6 124 aa12.9□□□□□ -0.34
RUFY3-213ENST00000514898 KRTAP19-2Q3LHN2 52 aa12.9□□□□□ -0.34
RUFY3-213ENST00000514898 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
RUFY3-213ENST00000514898 XP32Q5T750 250 aa12.87□□□□□ -0.35
RUFY3-213ENST00000514898 A0A096LNJ9 63 aa12.86□□□□□ -0.35
RUFY3-213ENST00000514898 KRTAP4-16G5E9R7 235 aaPredicted RBP12.86□□□□□ -0.35
RUFY3-213ENST00000514898 SPRR1AP35321 89 aa12.86□□□□□ -0.35
RUFY3-213ENST00000514898 LINC00483Q53H64 154 aa12.86□□□□□ -0.35
RUFY3-213ENST00000514898 Q8N377 158 aa12.86□□□□□ -0.35
RUFY3-213ENST00000514898 SMCR5Q8TEV8 140 aa12.84□□□□□ -0.35
RUFY3-213ENST00000514898 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
RUFY3-213ENST00000514898 PRYO14603 147 aa12.82□□□□□ -0.36
RUFY3-213ENST00000514898 RPS29P62273 56 aaKnown RBP12.82□□□□□ -0.36
RUFY3-213ENST00000514898 FA2HQ7L5A8 372 aa12.81□□□□□ -0.36
RUFY3-213ENST00000514898 C11orf86A6NJI1 115 aa12.8□□□□□ -0.36
RUFY3-213ENST00000514898 MT1HP80294 61 aa12.8□□□□□ -0.36
RUFY3-213ENST00000514898 SFTA2Q6UW10 78 aa12.8□□□□□ -0.36
RUFY3-213ENST00000514898 KCNQ1DNQ9H478 68 aa12.8□□□□□ -0.36
RUFY3-213ENST00000514898 NDUFA6P56556 154 aa12.79□□□□□ -0.36
RUFY3-213ENST00000514898 LINC00158P58513 81 aa12.79□□□□□ -0.36
RUFY3-213ENST00000514898 URB1-AS1Q96HZ7 61 aa12.78□□□□□ -0.36
RUFY3-213ENST00000514898 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
RUFY3-213ENST00000514898 SMCO4Q9NRQ5 59 aa12.77□□□□□ -0.37
RUFY3-213ENST00000514898 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
RUFY3-213ENST00000514898 MOBPQ13875 183 aa12.76□□□□□ -0.37
RUFY3-213ENST00000514898 FAM19A2Q8N3H0 131 aa12.76□□□□□ -0.37
RUFY3-213ENST00000514898 GAGE2AQ6NT46 116 aa12.75□□□□□ -0.37
RUFY3-213ENST00000514898 SLC25A20O43772 301 aa12.74□□□□□ -0.37
RUFY3-213ENST00000514898 ERC2-IT1O76042 136 aa12.74□□□□□ -0.37
RUFY3-213ENST00000514898 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
RUFY3-213ENST00000514898 SSBP3-AS1Q7Z2R9 100 aa12.74□□□□□ -0.37
RUFY3-213ENST00000514898 IGLV9-49A0A0B4J1Y8 123 aa12.73□□□□□ -0.37
RUFY3-213ENST00000514898 NCR3O14931 201 aa12.72□□□□□ -0.37
RUFY3-213ENST00000514898 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
RUFY3-213ENST00000514898 TRBV10-3A0A0K0K1G6 114 aa12.71□□□□□ -0.37
RUFY3-213ENST00000514898 ETDCA0A1B0GVM5 59 aa12.71□□□□□ -0.37
RUFY3-213ENST00000514898 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
RUFY3-213ENST00000514898 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
RUFY3-213ENST00000514898 B5MCH6 92 aa12.69□□□□□ -0.38
RUFY3-213ENST00000514898 LORP23490 312 aaPredicted RBP12.69□□□□□ -0.38
RUFY3-213ENST00000514898 FABP9Q0Z7S8 132 aa12.69□□□□□ -0.38
RUFY3-213ENST00000514898 PMCHL1Q16048 86 aa12.69□□□□□ -0.38
RUFY3-213ENST00000514898 HBDP02042 147 aa12.68□□□□□ -0.38
RUFY3-213ENST00000514898 TMEM223A0PJW6 202 aa12.67□□□□□ -0.38
RUFY3-213ENST00000514898 COX19Q49B96 90 aa12.67□□□□□ -0.38
RUFY3-213ENST00000514898 MIR7-3HGQ8N6C7 128 aa12.67□□□□□ -0.38
RUFY3-213ENST00000514898 Q9BRP9 147 aa12.67□□□□□ -0.38
RUFY3-213ENST00000514898 CFC1BP0CG36 223 aa12.66□□□□□ -0.38
RUFY3-213ENST00000514898 C18orf32Q8TCD1 76 aa12.66□□□□□ -0.38
RUFY3-213ENST00000514898 LINC00614P0C842 121 aa12.65□□□□□ -0.38
RUFY3-213ENST00000514898 S100PP25815 95 aa12.64□□□□□ -0.39
RUFY3-213ENST00000514898 TMEM218A2RU14 115 aa12.63□□□□□ -0.39
RUFY3-213ENST00000514898 CHTOPQ9Y3Y2 248 aaKnown RBP12.63□□□□□ -0.39
RUFY3-213ENST00000514898 KRTAP10-6P60371 365 aaPredicted RBP12.62□□□□□ -0.39
RUFY3-213ENST00000514898 PCOTHQ58A44 107 aa12.62□□□□□ -0.39
RUFY3-213ENST00000514898 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
RUFY3-213ENST00000514898 MEIG1Q5JSS6 88 aa12.6□□□□□ -0.39
RUFY3-213ENST00000514898 CLLU1Q5K131 121 aa12.59□□□□□ -0.39
RUFY3-213ENST00000514898 Q6ZRX8 168 aa12.59□□□□□ -0.39
RUFY3-213ENST00000514898 SEC11CQ9BY50 192 aa12.59□□□□□ -0.39
RUFY3-213ENST00000514898 IGLV8-61A0A075B6I0 122 aa12.58□□□□□ -0.4
RUFY3-213ENST00000514898 LOC107984156A0A0G2JMH3 177 aa12.57□□□□□ -0.4
RUFY3-213ENST00000514898 HERV-K104P63124 156 aa12.57□□□□□ -0.4
RUFY3-213ENST00000514898 ARL17AQ8IVW1 177 aa12.57□□□□□ -0.4
RUFY3-213ENST00000514898 UQCC3Q6UW78 93 aa12.56□□□□□ -0.4
RUFY3-213ENST00000514898 FLGP20930 4061 aaPredicted RBP12.56□□□□□ -0.4
RUFY3-213ENST00000514898 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
RUFY3-213ENST00000514898 DDTP30046 118 aa12.54□□□□□ -0.4
RUFY3-213ENST00000514898 TRBV10-2A0A0K0K1G8 114 aa12.53□□□□□ -0.4
RUFY3-213ENST00000514898 S100A12P80511 92 aa12.53□□□□□ -0.4
RUFY3-213ENST00000514898 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
RUFY3-213ENST00000514898 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
RUFY3-213ENST00000514898 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
RUFY3-213ENST00000514898 IGLV6-57P01721 117 aa12.49□□□□□ -0.41
RUFY3-213ENST00000514898 ST20-AS1Q8NBB2 130 aa12.49□□□□□ -0.41
RUFY3-213ENST00000514898 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
RUFY3-213ENST00000514898 MAP1LC3CQ9BXW4 147 aa12.48□□□□□ -0.41
RUFY3-213ENST00000514898 MYMXA0A1B0GTQ4 84 aa12.47□□□□□ -0.41
RUFY3-213ENST00000514898 C9orf92A6NGG3 77 aa12.47□□□□□ -0.41
RUFY3-213ENST00000514898 IFI27L1Q96BM0 104 aa12.47□□□□□ -0.41
RUFY3-213ENST00000514898 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
RUFY3-213ENST00000514898 RPS10P5Q9NQ39 176 aa12.45□□□□□ -0.42
RUFY3-213ENST00000514898 SPANXB1Q9NS25 103 aaPredicted RBP12.45□□□□□ -0.42
RUFY3-213ENST00000514898 RHEBQ15382 184 aa12.43□□□□□ -0.42
RUFY3-213ENST00000514898 JOSD1Q15040 202 aaPredicted RBP12.42□□□□□ -0.42
RUFY3-213ENST00000514898 TRAV23DV6A0A075B6W5 121 aa12.41□□□□□ -0.42
RUFY3-213ENST00000514898 NDUFC2O95298 119 aa12.41□□□□□ -0.42
RUFY3-213ENST00000514898 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
RUFY3-213ENST00000514898 SPRR1BP22528 89 aa12.4□□□□□ -0.42
RUFY3-213ENST00000514898 LIMD2Q9BT23 127 aa12.4□□□□□ -0.42
RUFY3-213ENST00000514898 ZNF73O43830 326 aaPredicted RBP12.39□□□□□ -0.43
RUFY3-213ENST00000514898 HRCT1Q6UXD1 115 aa12.39□□□□□ -0.43
RUFY3-213ENST00000514898 EIF4EBP3O60516 100 aaPredicted RBP12.38□□□□□ -0.43
RUFY3-213ENST00000514898 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms