RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
PDLIM3-210ENST00000514308 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 K7ERJ3 54 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 FABP2P12104 132 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 CNBPP62633 177 aaKnown RBP8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
PDLIM3-210ENST00000514308 GAGE10A6NGK3 116 aa8.53□□□□□ -1.04
PDLIM3-210ENST00000514308 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
PDLIM3-210ENST00000514308 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
PDLIM3-210ENST00000514308 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
PDLIM3-210ENST00000514308 DMBT1Q9UGM3 2413 aaPredicted RBP8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 A0A0B4J2C4 111 aa8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 A4D1N5 150 aa8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 K7EP34 96 aa8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 CFC1P0CG37 223 aa8.52□□□□□ -1.05
PDLIM3-210ENST00000514308 PRSS2P07478 247 aa8.51□□□□□ -1.05
PDLIM3-210ENST00000514308 C5orf38Q86SI9 138 aa8.51□□□□□ -1.05
PDLIM3-210ENST00000514308 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
PDLIM3-210ENST00000514308 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
PDLIM3-210ENST00000514308 APOMO95445 188 aa8.5□□□□□ -1.05
PDLIM3-210ENST00000514308 XCL1P47992 114 aa8.5□□□□□ -1.05
PDLIM3-210ENST00000514308 SDIM1Q6ZPB5 146 aa8.5□□□□□ -1.05
PDLIM3-210ENST00000514308 Q8IZM0 81 aa8.5□□□□□ -1.05
PDLIM3-210ENST00000514308 SPCS1Q9Y6A9 102 aa8.5□□□□□ -1.05
PDLIM3-210ENST00000514308 COX7A2LO14548 114 aa8.49□□□□□ -1.05
PDLIM3-210ENST00000514308 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
PDLIM3-210ENST00000514308 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
PDLIM3-210ENST00000514308 C6orf226Q5I0X4 101 aa8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 LYRM7Q5U5X0 104 aa8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
PDLIM3-210ENST00000514308 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 TSPAN13O95857 204 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 SLPIP03973 132 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 CXCL5P42830 114 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 FOXI1Q12951 378 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 HIGD2BQ4VC39 106 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
PDLIM3-210ENST00000514308 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
PDLIM3-210ENST00000514308 MYCBP2O75592 4640 aa8.46□□□□□ -1.06
PDLIM3-210ENST00000514308 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
PDLIM3-210ENST00000514308 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
PDLIM3-210ENST00000514308 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
PDLIM3-210ENST00000514308 PANO1I0J062 215 aa8.44□□□□□ -1.06
PDLIM3-210ENST00000514308 MALP21145 153 aa8.44□□□□□ -1.06
PDLIM3-210ENST00000514308 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
PDLIM3-210ENST00000514308 J3QL48 77 aa8.43□□□□□ -1.06
PDLIM3-210ENST00000514308 RPL37AP61513 92 aaKnown RBP8.43□□□□□ -1.06
PDLIM3-210ENST00000514308 COX17Q14061 63 aa8.43□□□□□ -1.06
PDLIM3-210ENST00000514308 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
PDLIM3-210ENST00000514308 TRBV20-1A0A075B6N2 111 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 ZNF561-AS1K7EIQ3 104 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 CHTF8P0CG12 524 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 CKS1BP61024 79 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 DAND5Q8N907 189 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
PDLIM3-210ENST00000514308 A0A087WYN8 130 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 LOC107984156A0A0G2JMH3 177 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 LINC00158P58513 81 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 NPC2P61916 151 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 ARL17AQ8IVW1 177 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 MIR7-3HGQ8N6C7 128 aa8.41□□□□□ -1.06
PDLIM3-210ENST00000514308 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
PDLIM3-210ENST00000514308 F8W1H4 67 aa8.4□□□□□ -1.06
PDLIM3-210ENST00000514308 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
PDLIM3-210ENST00000514308 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
PDLIM3-210ENST00000514308 SCGB1C2P0DMR2 95 aa8.39□□□□□ -1.07
PDLIM3-210ENST00000514308 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
PDLIM3-210ENST00000514308 HERC1Q15751 4861 aa8.39□□□□□ -1.07
PDLIM3-210ENST00000514308 F8WDY8 70 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 PSMB2P49721 201 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 Q1RN00 199 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 LINC00526Q96FQ7 95 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
PDLIM3-210ENST00000514308 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 COX6CP09669 75 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 PFN2P35080 140 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 SPAG11BQ08648 103 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 SND1-IT1Q9HBX3 110 aa8.37□□□□□ -1.07
PDLIM3-210ENST00000514308 H3BMG7 143 aa8.36□□□□□ -1.07
PDLIM3-210ENST00000514308 RPL13AP40429 203 aaKnown RBP8.36□□□□□ -1.07
PDLIM3-210ENST00000514308 A0A096LNI7 61 aa8.35□□□□□ -1.07
PDLIM3-210ENST00000514308 H7C2G1 150 aa8.35□□□□□ -1.07
PDLIM3-210ENST00000514308 TCL1BO95988 128 aa8.35□□□□□ -1.07
PDLIM3-210ENST00000514308 OXTP01178 125 aa8.35□□□□□ -1.07
PDLIM3-210ENST00000514308 CAMK2N2Q96S95 79 aa8.35□□□□□ -1.07
PDLIM3-210ENST00000514308 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms