RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 LINC00528Q8N1L1 170 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 IGHV3OR16-9A0A0B4J2B5 98 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 FHL2Q14192 279 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 DSCR8Q96T75 97 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 FAM30AQ9NZY2 134 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 TRAV12-2A0A075B6T6 113 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 LCE6AA0A183 80 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 NUPR2A6NF83 97 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 ATOX1O00244 68 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 Q8NDZ9 215 aa5.06□□□□□ -1.6
CLIP1-205ENST00000514271 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
CLIP1-205ENST00000514271 LOC110117498A0A087WWA1 95 aa5.05□□□□□ -1.6
CLIP1-205ENST00000514271 SPART-AS1P0CW21 52 aa5.05□□□□□ -1.6
CLIP1-205ENST00000514271 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
CLIP1-205ENST00000514271 WFDC10AQ9H1F0 79 aa5.05□□□□□ -1.6
CLIP1-205ENST00000514271 Q75L30 129 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 Q8NAQ8 132 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 WNK1Q9H4A3 2382 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 CCKP06307 115 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 KLKP1Q107X0 134 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 DEFB135Q30KP9 77 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 ALMS1Q8TCU4 4167 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 S100A4P26447 101 aaKnown RBP5.04□□□□□ -1.6
CLIP1-205ENST00000514271 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
CLIP1-205ENST00000514271 IGHV3-64A0A075B6Q5 118 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 H7BZZ5 65 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 PRB2P02812 416 aaPredicted RBP5.03□□□□□ -1.6
CLIP1-205ENST00000514271 TRBV10-1A0A0K0K1A3 114 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 H3BNG1 76 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 SPINK13Q1W4C9 94 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 XP32Q5T750 250 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 XCL2Q9UBD3 114 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 SERP1Q9Y6X1 66 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 TRAV10A0A0B4J240 114 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 hADV29S1A0JD25 119 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
CLIP1-205ENST00000514271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.02□□□□□ -1.61
CLIP1-205ENST00000514271 K7EQD1 137 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 INAFM2P0DMQ5 153 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 ATP5EP2Q5VTU8 51 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 KIAA0087Q14695 138 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 A0A087WZ39 114 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 TRBV6-4A0A1B0GX49 114 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 COX6CP09669 75 aa5.02□□□□□ -1.61
CLIP1-205ENST00000514271 IGHV3-38A0A0C4DH36 116 aa5.01□□□□□ -1.61
CLIP1-205ENST00000514271 FP248Q71RG6 208 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-205ENST00000514271 DEFB104AQ8WTQ1 72 aa5.01□□□□□ -1.61
CLIP1-205ENST00000514271 LAMTOR3Q9UHA4 124 aa5.01□□□□□ -1.61
CLIP1-205ENST00000514271 CCL18P55774 89 aa5.01□□□□□ -1.61
CLIP1-205ENST00000514271 FBN3Q75N90 2809 aa5.01□□□□□ -1.61
CLIP1-205ENST00000514271 PRM2P04554 102 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 TRBV7-4A0A0J9YYF1 115 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 IBA57-AS1B1ANH7 110 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 RNASE13Q5GAN3 156 aaKnown RBP5□□□□□ -1.61
CLIP1-205ENST00000514271 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 Q6ZQT0 140 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
CLIP1-205ENST00000514271 TRBV7-6A0A0J9YX20 115 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 IGKV3-20P01619 116 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 PRSS2P07478 247 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 DAD1P61803 113 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 A0A0J9YWU9 116 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 H0YGX0 51 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 COPS9Q8WXC6 57 aa4.99□□□□□ -1.61
CLIP1-205ENST00000514271 DNAH6Q9C0G6 4158 aa4.98□□□□□ -1.61
CLIP1-205ENST00000514271 NPC2P61916 151 aa4.98□□□□□ -1.61
CLIP1-205ENST00000514271 H7C2G1 150 aa4.98□□□□□ -1.61
CLIP1-205ENST00000514271 DNAH9Q9NYC9 4486 aa4.97□□□□□ -1.61
CLIP1-205ENST00000514271 FAM74A4Q5TZK3 123 aa4.97□□□□□ -1.61
CLIP1-205ENST00000514271 ERC2-IT1O76042 136 aa4.96□□□□□ -1.61
CLIP1-205ENST00000514271 Q8N814 137 aa4.96□□□□□ -1.61
CLIP1-205ENST00000514271 VPS13DQ5THJ4 4388 aa4.96□□□□□ -1.62
CLIP1-205ENST00000514271 KTN1-AS1Q86SY8 53 aa4.96□□□□□ -1.62
CLIP1-205ENST00000514271 A0A087WVE0 104 aa4.96□□□□□ -1.62
CLIP1-205ENST00000514271 Q9HAA7 133 aa4.96□□□□□ -1.62
CLIP1-205ENST00000514271 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.62
CLIP1-205ENST00000514271 A0A1B0GUV1 79 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 IGLV6-57P01721 117 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 COX7B2Q8TF08 81 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 Q6ZVQ6 151 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 DEFB131BA0A096LNP1 70 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 M0R2N4 97 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 MIR7-3HGQ8N6C7 128 aa4.95□□□□□ -1.62
CLIP1-205ENST00000514271 Q8IZM0 81 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 C14orf132Q9NPU4 83 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 NDUFS5O43920 106 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 CXCL6P80162 114 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 COX17Q14061 63 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 PRO0255Q9UI72 69 aa4.94□□□□□ -1.62
CLIP1-205ENST00000514271 IGLV4-60A0A075B6I1 120 aa4.93□□□□□ -1.62
CLIP1-205ENST00000514271 Q1RN00 199 aa4.93□□□□□ -1.62
CLIP1-205ENST00000514271 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
CLIP1-205ENST00000514271 TRGV2A0A075B6R0 118 aa4.93□□□□□ -1.62
CLIP1-205ENST00000514271 CASC10Q5T4H9 136 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms