RNA–Protein interactions for RNA: ENST00000514131.1

CSNK1G3-208, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 5

Gene CSNK1G3, Length 253 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-208ENST00000514131 SMG6Q86US8 1419 aaKnown RBP-2.57□□□□□ -2.82
CSNK1G3-208ENST00000514131 FAM223BA6NKX1 122 aa-2.57□□□□□ -2.82
CSNK1G3-208ENST00000514131 ANP32BQ92688 251 aaKnown RBP-2.57□□□□□ -2.82
CSNK1G3-208ENST00000514131 TRRAPQ9Y4A5 3859 aa-2.57□□□□□ -2.82
CSNK1G3-208ENST00000514131 C9orf92A6NGG3 77 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 ARPC4P59998 168 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 Q56UQ5 140 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 C5orf38Q86SI9 138 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 C8orf59Q8N0T1 100 aaPredicted RBP-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 PFDN5Q99471 154 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 HIGD1BQ9P298 99 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 GRIN2AQ12879 1464 aa-2.58□□□□□ -2.82
CSNK1G3-208ENST00000514131 MYO15AQ9UKN7 3530 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 TRAPPC2P0DI81 140 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 TRAPPC2BP0DI82 140 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 DR1Q01658 176 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 CATR1Q13166 79 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 MANBALQ9NQG1 85 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 TRIOO75962 3097 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 ADGRL2O95490 1459 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 MARF1Q9Y4F3 1742 aaKnown RBP-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 ANKRD50Q9ULJ7 1429 aa-2.59□□□□□ -2.82
CSNK1G3-208ENST00000514131 CICQ96RK0 1608 aaPredicted RBP-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 SMIM21Q3B7S5 101 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 MEIG1Q5JSS6 88 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 C6orf201Q7Z4U5 140 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 PYDC1Q8WXC3 89 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 EHBP1L1Q8N3D4 1523 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 BPTFQ12830 3046 aa-2.6□□□□□ -2.83
CSNK1G3-208ENST00000514131 LINC00846Q9NV44 126 aa-2.61□□□□□ -2.83
CSNK1G3-208ENST00000514131 SAA2P0DJI9 122 aaPredicted RBP-2.62□□□□□ -2.83
CSNK1G3-208ENST00000514131 GNG11P61952 73 aa-2.62□□□□□ -2.83
CSNK1G3-208ENST00000514131 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.63□□□□□ -2.83
CSNK1G3-208ENST00000514131 APOC2P02655 101 aa-2.63□□□□□ -2.83
CSNK1G3-208ENST00000514131 FAM25AB3EWG3 89 aa-2.64□□□□□ -2.83
CSNK1G3-208ENST00000514131 FAM25CB3EWG5 89 aa-2.64□□□□□ -2.83
CSNK1G3-208ENST00000514131 FAM25GB3EWG6 89 aa-2.64□□□□□ -2.83
CSNK1G3-208ENST00000514131 NCOA3Q9Y6Q9 1424 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 A0A087WVE0 104 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 SPTY2D1-AS1A0A0U1RR47 76 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 H0YAA0 97 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 COX6CP09669 75 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 Q0VG73 95 aa-2.65□□□□□ -2.83
CSNK1G3-208ENST00000514131 ZFHX4Q86UP3 3567 aa-2.66□□□□□ -2.83
CSNK1G3-208ENST00000514131 EDC4Q6P2E9 1401 aaKnown RBP-2.66□□□□□ -2.83
CSNK1G3-208ENST00000514131 PRUNE2Q8WUY3 3088 aa-2.66□□□□□ -2.83
CSNK1G3-208ENST00000514131 MT1MQ8N339 61 aa-2.66□□□□□ -2.84
CSNK1G3-208ENST00000514131 C12orf57Q99622 126 aa-2.66□□□□□ -2.84
CSNK1G3-208ENST00000514131 COL14A1Q05707 1796 aaKnown RBP-2.66□□□□□ -2.84
CSNK1G3-208ENST00000514131 CLIP1P30622 1438 aa-2.67□□□□□ -2.84
CSNK1G3-208ENST00000514131 QRICH2Q9H0J4 1663 aa-2.67□□□□□ -2.84
CSNK1G3-208ENST00000514131 F6UZH7 168 aa-2.68□□□□□ -2.84
CSNK1G3-208ENST00000514131 SCN7AQ01118 1682 aa-2.69□□□□□ -2.84
CSNK1G3-208ENST00000514131 DNAH10Q8IVF4 4471 aa-2.69□□□□□ -2.84
CSNK1G3-208ENST00000514131 A0A0G2JND7 137 aa-2.69□□□□□ -2.84
CSNK1G3-208ENST00000514131 PRO1854Q9UHT4 67 aa-2.69□□□□□ -2.84
CSNK1G3-208ENST00000514131 UBE2L5PA0A1B0GUS4 154 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 OOSP1A8MZH6 123 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 H3BQF6 201 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 MT2AP02795 61 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 GNGT1P63211 74 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 UBE2L3P68036 154 aaKnown RBP-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 DEFB107AQ8IZN7 70 aa-2.7□□□□□ -2.84
CSNK1G3-208ENST00000514131 HSD52Q0P140 79 aa-2.71□□□□□ -2.84
CSNK1G3-208ENST00000514131 MYH7P12883 1935 aa-2.72□□□□□ -2.84
CSNK1G3-208ENST00000514131 ARMS2P0C7Q2 107 aa-2.72□□□□□ -2.84
CSNK1G3-208ENST00000514131 TRBV7-7A0A0K0K1E9 115 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 C7orf77A4D0Y5 90 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 H0Y9P7 68 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 GNG7O60262 68 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 SPTAN1Q13813 2472 aaKnown RBP-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 SHROOM2Q13796 1616 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 NUP188Q5SRE5 1749 aa-2.73□□□□□ -2.85
CSNK1G3-208ENST00000514131 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.74□□□□□ -2.85
CSNK1G3-208ENST00000514131 LINC00470Q9BZP3 86 aa-2.74□□□□□ -2.85
CSNK1G3-208ENST00000514131 LRRC37AA6NMS7 1700 aa-2.74□□□□□ -2.85
CSNK1G3-208ENST00000514131 TCHHQ07283 1943 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 DEFB1P60022 68 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 SELENOWP63302 87 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 VAMP8Q9BV40 100 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 DPH3P1Q9H4G8 78 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 PSENENQ9NZ42 101 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 S4R3F8 94 aa-2.75□□□□□ -2.85
CSNK1G3-208ENST00000514131 ROBO1Q9Y6N7 1651 aa-2.76□□□□□ -2.85
CSNK1G3-208ENST00000514131 A2ML1A8K2U0 1454 aa-2.76□□□□□ -2.85
CSNK1G3-208ENST00000514131 MT1GP13640 62 aa-2.76□□□□□ -2.85
CSNK1G3-208ENST00000514131 PP6455Q8WZ26 134 aa-2.76□□□□□ -2.85
CSNK1G3-208ENST00000514131 PDCD11Q14690 1871 aaKnown RBP-2.76□□□□□ -2.85
CSNK1G3-208ENST00000514131 NAP1L6A6NFF2 107 aa-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 FGF7P21781 194 aa-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 CEP152O94986 1710 aa-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 KTN1Q86UP2 1357 aaKnown RBP-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 SCAPERQ9BY12 1400 aa-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 FREM2Q5SZK8 3169 aa-2.77□□□□□ -2.85
CSNK1G3-208ENST00000514131 DIP2CQ9Y2E4 1556 aa-2.78□□□□□ -2.85
CSNK1G3-208ENST00000514131 K7EP34 96 aa-2.78□□□□□ -2.85
CSNK1G3-208ENST00000514131 ATP5EP56381 51 aaPredicted RBP-2.78□□□□□ -2.85
CSNK1G3-208ENST00000514131 PAIP2BQ9ULR5 123 aaKnown RBP-2.78□□□□□ -2.85
CSNK1G3-208ENST00000514131 NAIPQ13075 1403 aa-2.78□□□□□ -2.85
CSNK1G3-208ENST00000514131 MRC2Q9UBG0 1479 aa-2.78□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms