RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 SCGB1C2P0DMR2 95 aa8.39□□□□□ -1.07
PVT1-203ENST00000513868 LYRM7Q5U5X0 104 aa8.39□□□□□ -1.07
PVT1-203ENST00000513868 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
PVT1-203ENST00000513868 TTC32Q5I0X7 151 aa8.38□□□□□ -1.07
PVT1-203ENST00000513868 TRBV20-1A0A075B6N2 111 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
PVT1-203ENST00000513868 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
PVT1-203ENST00000513868 Q6ZRP5 223 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
PVT1-203ENST00000513868 SMIM11BQ8TCY0 68 aa8.36□□□□□ -1.07
PVT1-203ENST00000513868 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
PVT1-203ENST00000513868 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
PVT1-203ENST00000513868 PSCAO43653 123 aa8.34□□□□□ -1.07
PVT1-203ENST00000513868 COX6CP09669 75 aa8.34□□□□□ -1.07
PVT1-203ENST00000513868 OR13C6PQ8NH95 151 aa8.34□□□□□ -1.07
PVT1-203ENST00000513868 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
PVT1-203ENST00000513868 NCR3O14931 201 aa8.34□□□□□ -1.08
PVT1-203ENST00000513868 MTURNQ8N3F0 131 aa8.34□□□□□ -1.08
PVT1-203ENST00000513868 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 LRCOL1A6NCL2 159 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 F8W1H4 67 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 M0R2N4 97 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 GAGE2EQ4V326 116 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
PVT1-203ENST00000513868 GAGE2DQ9UEU5 116 aa8.33□□□□□ -1.08
PVT1-203ENST00000513868 VPREB1P12018 145 aa8.32□□□□□ -1.08
PVT1-203ENST00000513868 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
PVT1-203ENST00000513868 Q6ZR54 194 aa8.32□□□□□ -1.08
PVT1-203ENST00000513868 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
PVT1-203ENST00000513868 LST1O00453 97 aa8.31□□□□□ -1.08
PVT1-203ENST00000513868 ATXN8Q156A1 80 aa8.31□□□□□ -1.08
PVT1-203ENST00000513868 TMEM126AQ9H061 195 aa8.31□□□□□ -1.08
PVT1-203ENST00000513868 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
PVT1-203ENST00000513868 DNAH6Q9C0G6 4158 aa8.3□□□□□ -1.08
PVT1-203ENST00000513868 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
PVT1-203ENST00000513868 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
PVT1-203ENST00000513868 LINC01620Q4KN68 170 aa8.3□□□□□ -1.08
PVT1-203ENST00000513868 FAM218AQ96MZ4 157 aa8.3□□□□□ -1.08
PVT1-203ENST00000513868 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
PVT1-203ENST00000513868 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
PVT1-203ENST00000513868 C9JAW5 83 aa8.27□□□□□ -1.08
PVT1-203ENST00000513868 C14orf177Q52M58 125 aa8.27□□□□□ -1.08
PVT1-203ENST00000513868 TRBV10-3A0A0K0K1G6 114 aa8.27□□□□□ -1.09
PVT1-203ENST00000513868 LOC107984640A0A0U1RRK4 108 aa8.27□□□□□ -1.09
PVT1-203ENST00000513868 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
PVT1-203ENST00000513868 PLA2G2DQ9UNK4 145 aa8.27□□□□□ -1.09
PVT1-203ENST00000513868 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
PVT1-203ENST00000513868 H0YGX0 51 aa8.26□□□□□ -1.09
PVT1-203ENST00000513868 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
PVT1-203ENST00000513868 LINC00476Q8WZB0 136 aa8.26□□□□□ -1.09
PVT1-203ENST00000513868 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
PVT1-203ENST00000513868 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.25□□□□□ -1.09
PVT1-203ENST00000513868 M0R378 163 aa8.25□□□□□ -1.09
PVT1-203ENST00000513868 SLC25A20O43772 301 aa8.25□□□□□ -1.09
PVT1-203ENST00000513868 LY6G6CO95867 125 aa8.25□□□□□ -1.09
PVT1-203ENST00000513868 GAGE2BQ13066 116 aa8.25□□□□□ -1.09
PVT1-203ENST00000513868 A0A087WYN8 130 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 TRACP01848 142 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 ETDBQ3ZM63 59 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 C3orf84H3BNL1 204 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 M0QXV9 152 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 C6orf99Q4VX62 202 aa8.24□□□□□ -1.09
PVT1-203ENST00000513868 IGLV5-37A0A075B6J1 123 aa8.23□□□□□ -1.09
PVT1-203ENST00000513868 Q8N814 137 aa8.23□□□□□ -1.09
PVT1-203ENST00000513868 A0A087WTM6 91 aa8.22□□□□□ -1.09
PVT1-203ENST00000513868 A0A096LNI7 61 aa8.22□□□□□ -1.09
PVT1-203ENST00000513868 ANKRD29Q8N6D5 301 aa8.22□□□□□ -1.09
PVT1-203ENST00000513868 C9orf163Q8N9P6 203 aa8.22□□□□□ -1.09
PVT1-203ENST00000513868 TRAV23DV6A0A075B6W5 121 aa8.21□□□□□ -1.09
PVT1-203ENST00000513868 C16orf90A8MZG2 172 aa8.21□□□□□ -1.09
PVT1-203ENST00000513868 OCIAD2Q56VL3 154 aa8.21□□□□□ -1.09
PVT1-203ENST00000513868 C7orf33Q8WU49 177 aa8.21□□□□□ -1.09
PVT1-203ENST00000513868 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
PVT1-203ENST00000513868 HECTD4Q9Y4D8 3996 aa8.2□□□□□ -1.1
PVT1-203ENST00000513868 H3BT86 120 aa8.2□□□□□ -1.1
PVT1-203ENST00000513868 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
PVT1-203ENST00000513868 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
PVT1-203ENST00000513868 C1orf134Q5TEV5 83 aa8.19□□□□□ -1.1
PVT1-203ENST00000513868 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
PVT1-203ENST00000513868 SDIM1Q6ZPB5 146 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 FRAS1Q86XX4 4008 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 IGKV2-24A0A0C4DH68 120 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 LINC00575Q6W349 94 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 FAM19A5Q7Z5A7 132 aaPredicted RBP8.18□□□□□ -1.1
PVT1-203ENST00000513868 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 KCNQ1DNQ9H478 68 aa8.18□□□□□ -1.1
PVT1-203ENST00000513868 A0A1B0GX51 115 aa8.17□□□□□ -1.1
PVT1-203ENST00000513868 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
PVT1-203ENST00000513868 TRBV7-6A0A0J9YX20 115 aa8.16□□□□□ -1.1
PVT1-203ENST00000513868 BAALC-AS2P0C853 105 aa8.16□□□□□ -1.1
PVT1-203ENST00000513868 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
PVT1-203ENST00000513868 IGLV1-50A0A075B6I6 118 aa8.15□□□□□ -1.1
PVT1-203ENST00000513868 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
PVT1-203ENST00000513868 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms