RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 TIMM17BO60830 172 aa4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 PRR3P79522 188 aaKnown RBP4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 SPINK6Q6UWN8 80 aa4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 C9orf129Q5T035 196 aaKnown RBP4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 FAM19A5Q7Z5A7 132 aaPredicted RBP4.47□□□□□ -1.69
RAPGEF2-212ENST00000513816 HAMPP81172 84 aa4.46□□□□□ -1.7
RAPGEF2-212ENST00000513816 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.7
RAPGEF2-212ENST00000513816 PFN2P35080 140 aa4.46□□□□□ -1.7
RAPGEF2-212ENST00000513816 HIST3H2BBQ8N257 126 aa4.46□□□□□ -1.7
RAPGEF2-212ENST00000513816 MRPL55Q7Z7F7 128 aaKnown RBP4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 SND1-IT1Q9HBX3 110 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 C22orf24Q9Y442 160 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 APOBP04114 4563 aaKnown RBP4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 IGKV2D-26A0A0A0MRZ7 120 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 LOC107984156A0A0G2JMH3 177 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 ARL17AQ8IVW1 177 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 PPDPFQ9H3Y8 114 aa4.45□□□□□ -1.7
RAPGEF2-212ENST00000513816 Q6ZVH6 145 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 DIRC1Q969H9 104 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 TRBV10-2A0A0K0K1G8 114 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 M0R378 163 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 KRTAP29-1A8MX34 341 aaPredicted RBP4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 NDUFC2O95298 119 aa4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 SMCPP49901 116 aaPredicted RBP4.44□□□□□ -1.7
RAPGEF2-212ENST00000513816 HIST1H2BLQ99880 126 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 SMIM13P0DJ93 91 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 TMEM238C9JI98 176 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 VPREB1P12018 145 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 RPL28P46779 137 aaKnown RBP4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 C1orf137Q5JT78 98 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 MIR7-3HGQ8N6C7 128 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 PMCHL2Q9BQD1 86 aa4.43□□□□□ -1.7
RAPGEF2-212ENST00000513816 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 C5orf52A6NGY3 159 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 IFITM1P13164 125 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 PRYO14603 147 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 BCE1O60756 84 aa4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
RAPGEF2-212ENST00000513816 HSPG2P98160 4391 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 FAM168BA1KXE4 195 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 LINC00167Q96N53 147 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 LCE2BO14633 110 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 BOD1L2Q8IYS8 172 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 LINC00518Q8N0U6 118 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 TSPEAR-AS2P59090 65 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
RAPGEF2-212ENST00000513816 A0A0U1RRA0 63 aa4.4□□□□□ -1.7
RAPGEF2-212ENST00000513816 SCGB1D4Q6XE38 83 aa4.4□□□□□ -1.7
RAPGEF2-212ENST00000513816 ZNF861PO60384 105 aa4.4□□□□□ -1.71
RAPGEF2-212ENST00000513816 SPANXDQ9BXN6 97 aa4.4□□□□□ -1.71
RAPGEF2-212ENST00000513816 SPANXCQ9NY87 97 aa4.4□□□□□ -1.71
RAPGEF2-212ENST00000513816 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.71
RAPGEF2-212ENST00000513816 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
RAPGEF2-212ENST00000513816 H0Y9J4 135 aa4.39□□□□□ -1.71
RAPGEF2-212ENST00000513816 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
RAPGEF2-212ENST00000513816 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
RAPGEF2-212ENST00000513816 PCP4P48539 62 aa4.39□□□□□ -1.71
RAPGEF2-212ENST00000513816 UBE2AP49459 152 aa4.39□□□□□ -1.71
RAPGEF2-212ENST00000513816 GAGE10A6NGK3 116 aa4.38□□□□□ -1.71
RAPGEF2-212ENST00000513816 RPL13AP40429 203 aaKnown RBP4.38□□□□□ -1.71
RAPGEF2-212ENST00000513816 LINC00337Q8N6G1 96 aa4.38□□□□□ -1.71
RAPGEF2-212ENST00000513816 ZNF706Q9Y5V0 76 aaPredicted RBP4.38□□□□□ -1.71
RAPGEF2-212ENST00000513816 HINT1P49773 126 aaPredicted RBP4.38□□□□□ -1.71
RAPGEF2-212ENST00000513816 S100A7L2Q5SY68 101 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 DLEU1O43261 78 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 KCNQ1DNQ9H478 68 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 LINC00308Q8TCZ7 52 aa4.37□□□□□ -1.71
RAPGEF2-212ENST00000513816 JOSD1Q15040 202 aaPredicted RBP4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 TMEM126AQ9H061 195 aa4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 ETDCA0A1B0GVM5 59 aa4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 DDTP30046 118 aa4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 CTAG1AP78358 180 aa4.36□□□□□ -1.71
RAPGEF2-212ENST00000513816 RPL37AP8A6NKH3 93 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 SPRR1AP35321 89 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 FAM19A1Q7Z5A9 133 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 LITAFQ99732 161 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
RAPGEF2-212ENST00000513816 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.71
RAPGEF2-212ENST00000513816 NCR3O14931 201 aa4.34□□□□□ -1.71
RAPGEF2-212ENST00000513816 IGKV2D-28P01615 120 aa4.34□□□□□ -1.71
RAPGEF2-212ENST00000513816 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
RAPGEF2-212ENST00000513816 VAMP8Q9BV40 100 aa4.34□□□□□ -1.71
RAPGEF2-212ENST00000513816 TRAV13-2A0A0B4J235 113 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms