RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 PSPHP1O15172 72 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 TRAV10A0A0B4J240 114 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 IGHV4-30-4P0DP06 118 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 FRYQ5TBA9 3013 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 LINC01561Q8N1V8 128 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 RETNQ9HD89 108 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
CLCN3-209ENST00000513761 CXCL6P80162 114 aa5.36□□□□□ -1.55
CLCN3-209ENST00000513761 DEFB116Q30KQ4 102 aa5.36□□□□□ -1.55
CLCN3-209ENST00000513761 FRYLO94915 3013 aa5.36□□□□□ -1.55
CLCN3-209ENST00000513761 LINC00208Q96KT6 92 aa5.36□□□□□ -1.55
CLCN3-209ENST00000513761 Q6ZQT0 140 aa5.36□□□□□ -1.55
CLCN3-209ENST00000513761 Q6ZRU5 148 aa5.35□□□□□ -1.55
CLCN3-209ENST00000513761 A6NED7 52 aa5.35□□□□□ -1.55
CLCN3-209ENST00000513761 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
CLCN3-209ENST00000513761 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
CLCN3-209ENST00000513761 LY6G6DO95868 133 aa5.34□□□□□ -1.55
CLCN3-209ENST00000513761 OXLD1Q5BKU9 147 aa5.34□□□□□ -1.55
CLCN3-209ENST00000513761 TM2D3Q9BRN9 247 aa5.34□□□□□ -1.55
CLCN3-209ENST00000513761 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
CLCN3-209ENST00000513761 Q6ZTC4 211 aa5.33□□□□□ -1.56
CLCN3-209ENST00000513761 LYPD5Q6UWN5 251 aa5.33□□□□□ -1.56
CLCN3-209ENST00000513761 ESRGQ1W209 222 aa5.33□□□□□ -1.56
CLCN3-209ENST00000513761 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
CLCN3-209ENST00000513761 C6orf48Q9UBA6 75 aa5.33□□□□□ -1.56
CLCN3-209ENST00000513761 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
CLCN3-209ENST00000513761 EPG5Q9HCE0 2579 aa5.31□□□□□ -1.56
CLCN3-209ENST00000513761 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
CLCN3-209ENST00000513761 A0A087WSZ3 146 aa5.31□□□□□ -1.56
CLCN3-209ENST00000513761 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
CLCN3-209ENST00000513761 LOC110117498A0A087WWA1 95 aa5.3□□□□□ -1.56
CLCN3-209ENST00000513761 C16orf95Q9H693 158 aa5.3□□□□□ -1.56
CLCN3-209ENST00000513761 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
CLCN3-209ENST00000513761 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
CLCN3-209ENST00000513761 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 F8P00451 2351 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 BCE1O60756 84 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 C14orf177Q52M58 125 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 MYO15AQ9UKN7 3530 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 C2orf48Q96LS8 159 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 X6R8D5 127 aa5.29□□□□□ -1.56
CLCN3-209ENST00000513761 ELOF1P60002 83 aaKnown RBP5.28□□□□□ -1.56
CLCN3-209ENST00000513761 MAP1AP78559 2803 aaPredicted RBP5.28□□□□□ -1.56
CLCN3-209ENST00000513761 HCG22E2RYF7 251 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 CENPEQ02224 2701 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 PCOTHQ58A44 107 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 C7orf33Q8WU49 177 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 PLAC8L1A1L4L8 177 aa5.28□□□□□ -1.56
CLCN3-209ENST00000513761 PRLHP81277 87 aa5.27□□□□□ -1.57
CLCN3-209ENST00000513761 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
CLCN3-209ENST00000513761 H0Y9P7 68 aa5.27□□□□□ -1.57
CLCN3-209ENST00000513761 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
CLCN3-209ENST00000513761 Q9BRP9 147 aa5.26□□□□□ -1.57
CLCN3-209ENST00000513761 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
CLCN3-209ENST00000513761 IGLV6-57P01721 117 aa5.25□□□□□ -1.57
CLCN3-209ENST00000513761 COL6A3P12111 3177 aa5.25□□□□□ -1.57
CLCN3-209ENST00000513761 BOD1L1Q8NFC6 3051 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 EYSQ5T1H1 3165 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 KALRNO60229 2985 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 LINC01600Q96MT4 127 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 IL17DQ8TAD2 202 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 M0R2N4 97 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 GIG44P09565 113 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-209ENST00000513761 LINC00336Q6ZUF6 198 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
CLCN3-209ENST00000513761 H7BZZ5 65 aa5.23□□□□□ -1.57
CLCN3-209ENST00000513761 FSHBP01225 129 aa5.23□□□□□ -1.57
CLCN3-209ENST00000513761 LINC00167Q96N53 147 aa5.23□□□□□ -1.57
CLCN3-209ENST00000513761 CSNK1G2-AS1Q8NCQ2 148 aa5.23□□□□□ -1.57
CLCN3-209ENST00000513761 SPTBN5Q9NRC6 3674 aaKnown RBP5.23□□□□□ -1.57
CLCN3-209ENST00000513761 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
CLCN3-209ENST00000513761 VPREB1P12018 145 aa5.22□□□□□ -1.57
CLCN3-209ENST00000513761 KLKP1Q107X0 134 aa5.21□□□□□ -1.57
CLCN3-209ENST00000513761 ADGRG4Q8IZF6 3080 aa5.21□□□□□ -1.57
CLCN3-209ENST00000513761 C1orf64Q8NEQ6 169 aa5.21□□□□□ -1.57
CLCN3-209ENST00000513761 FASNP49327 2511 aaKnown RBP5.21□□□□□ -1.58
CLCN3-209ENST00000513761 Q6ZRP5 223 aa5.21□□□□□ -1.58
CLCN3-209ENST00000513761 Q8NBF4 154 aa5.21□□□□□ -1.58
CLCN3-209ENST00000513761 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
CLCN3-209ENST00000513761 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 F8WDY8 70 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 SEC61GP60059 68 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 Q6ZRX8 168 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 Q8NAQ8 132 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
CLCN3-209ENST00000513761 LINC00476Q8WZB0 136 aa5.19□□□□□ -1.58
CLCN3-209ENST00000513761 RPL37AP61513 92 aaKnown RBP5.19□□□□□ -1.58
CLCN3-209ENST00000513761 LINC01556Q5JQF7 62 aa5.19□□□□□ -1.58
CLCN3-209ENST00000513761 GVQW2A0A096LPI5 108 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-209ENST00000513761 OBSCN-AS1Q96MR7 158 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 REV3LO60673 3130 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 K7EQZ3 153 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 AKAP13Q12802 2813 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 C19orf73Q9NVV2 129 aa5.18□□□□□ -1.58
CLCN3-209ENST00000513761 LINC00528Q8N1L1 170 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 SERTAD4-AS1Q5TG53 156 aa5.17□□□□□ -1.58
CLCN3-209ENST00000513761 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms