RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
DDX41-216ENST00000513562 Q8N377 158 aa6.03□□□□□ -1.44
DDX41-216ENST00000513562 Q8N8P6 123 aa6.03□□□□□ -1.44
DDX41-216ENST00000513562 MAP1LC3AQ9H492 121 aa6.03□□□□□ -1.44
DDX41-216ENST00000513562 LAMTOR2Q9Y2Q5 125 aa6.03□□□□□ -1.44
DDX41-216ENST00000513562 ZNF706Q9Y5V0 76 aaPredicted RBP6.03□□□□□ -1.44
DDX41-216ENST00000513562 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
DDX41-216ENST00000513562 ORMDL2Q53FV1 153 aa6.02□□□□□ -1.45
DDX41-216ENST00000513562 IGLV5-45A0A087WSX0 123 aa6.01□□□□□ -1.45
DDX41-216ENST00000513562 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
DDX41-216ENST00000513562 K7EMI3 77 aa6□□□□□ -1.45
DDX41-216ENST00000513562 RPL24P83731 157 aaKnown RBP6□□□□□ -1.45
DDX41-216ENST00000513562 ATP5L2Q7Z4Y8 100 aa6□□□□□ -1.45
DDX41-216ENST00000513562 Q8NDZ9 215 aa6□□□□□ -1.45
DDX41-216ENST00000513562 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
DDX41-216ENST00000513562 TRAV9-1A0A075B6T8 112 aa5.99□□□□□ -1.45
DDX41-216ENST00000513562 TINCRA0A1B0GVN0 87 aa5.99□□□□□ -1.45
DDX41-216ENST00000513562 SLC25A20O43772 301 aa5.99□□□□□ -1.45
DDX41-216ENST00000513562 ATP5LO75964 103 aa5.99□□□□□ -1.45
DDX41-216ENST00000513562 SMCO4Q9NRQ5 59 aa5.99□□□□□ -1.45
DDX41-216ENST00000513562 USH2AO75445 5202 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 IGLV8-61A0A075B6I0 122 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 SPINK8P0C7L1 97 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 PFN2P35080 140 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
DDX41-216ENST00000513562 M0R2T5 61 aa5.97□□□□□ -1.45
DDX41-216ENST00000513562 TOMM6Q96B49 74 aa5.97□□□□□ -1.45
DDX41-216ENST00000513562 SSPOA2VEC9 5147 aa5.96□□□□□ -1.45
DDX41-216ENST00000513562 FLGP20930 4061 aaPredicted RBP5.95□□□□□ -1.46
DDX41-216ENST00000513562 G0S2P27469 103 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 MOBPQ13875 183 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 COX17Q14061 63 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 COX19Q49B96 90 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 ERASQ7Z444 233 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 NXT2Q9NPJ8 142 aaKnown RBP5.95□□□□□ -1.46
DDX41-216ENST00000513562 ERG28Q9UKR5 140 aa5.95□□□□□ -1.46
DDX41-216ENST00000513562 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
DDX41-216ENST00000513562 SMCR5Q8TEV8 140 aa5.94□□□□□ -1.46
DDX41-216ENST00000513562 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
DDX41-216ENST00000513562 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
DDX41-216ENST00000513562 SCGB3A1Q96QR1 104 aa5.93□□□□□ -1.46
DDX41-216ENST00000513562 CST9LQ9H4G1 147 aa5.93□□□□□ -1.46
DDX41-216ENST00000513562 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
DDX41-216ENST00000513562 H3BRM9 83 aa5.92□□□□□ -1.46
DDX41-216ENST00000513562 PRYO14603 147 aa5.92□□□□□ -1.46
DDX41-216ENST00000513562 SPRR1AP35321 89 aa5.92□□□□□ -1.46
DDX41-216ENST00000513562 KRTAP4-16G5E9R7 235 aaPredicted RBP5.91□□□□□ -1.46
DDX41-216ENST00000513562 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
DDX41-216ENST00000513562 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
DDX41-216ENST00000513562 TRAPPC1Q9Y5R8 145 aa5.9□□□□□ -1.46
DDX41-216ENST00000513562 FABP9Q0Z7S8 132 aa5.89□□□□□ -1.47
DDX41-216ENST00000513562 PMVKQ15126 192 aa5.89□□□□□ -1.47
DDX41-216ENST00000513562 ZNF625Q96I27 306 aaPredicted RBP5.89□□□□□ -1.47
DDX41-216ENST00000513562 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
DDX41-216ENST00000513562 ETDCA0A1B0GVM5 59 aa5.88□□□□□ -1.47
DDX41-216ENST00000513562 COLCA2A8K830 154 aa5.88□□□□□ -1.47
DDX41-216ENST00000513562 IGLC3P0DOY3 106 aa5.88□□□□□ -1.47
DDX41-216ENST00000513562 C9orf92A6NGG3 77 aa5.87□□□□□ -1.47
DDX41-216ENST00000513562 LINC01549A6NIU2 74 aa5.87□□□□□ -1.47
DDX41-216ENST00000513562 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
DDX41-216ENST00000513562 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
DDX41-216ENST00000513562 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
DDX41-216ENST00000513562 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
DDX41-216ENST00000513562 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
DDX41-216ENST00000513562 ZNF22P17026 224 aaPredicted RBP5.86□□□□□ -1.47
DDX41-216ENST00000513562 LINC01546A6NGU7 62 aa5.85□□□□□ -1.47
DDX41-216ENST00000513562 TRGC2P03986 189 aa5.85□□□□□ -1.47
DDX41-216ENST00000513562 B5MCH6 92 aa5.84□□□□□ -1.47
DDX41-216ENST00000513562 NCR3O14931 201 aa5.84□□□□□ -1.47
DDX41-216ENST00000513562 LINC00158P58513 81 aa5.84□□□□□ -1.47
DDX41-216ENST00000513562 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
DDX41-216ENST00000513562 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
DDX41-216ENST00000513562 BOD1L2Q8IYS8 172 aa5.83□□□□□ -1.48
DDX41-216ENST00000513562 Q9BRP9 147 aa5.83□□□□□ -1.48
DDX41-216ENST00000513562 A6NJY4 79 aa5.82□□□□□ -1.48
DDX41-216ENST00000513562 FA2HQ7L5A8 372 aa5.82□□□□□ -1.48
DDX41-216ENST00000513562 LIMD2Q9BT23 127 aa5.82□□□□□ -1.48
DDX41-216ENST00000513562 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
DDX41-216ENST00000513562 IGLV6-57P01721 117 aa5.81□□□□□ -1.48
DDX41-216ENST00000513562 BAGE3Q86Y29 109 aa5.81□□□□□ -1.48
DDX41-216ENST00000513562 C18orf32Q8TCD1 76 aa5.81□□□□□ -1.48
DDX41-216ENST00000513562 CFC1P0CG37 223 aa5.8□□□□□ -1.48
DDX41-216ENST00000513562 Q6ZRX8 168 aa5.8□□□□□ -1.48
DDX41-216ENST00000513562 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
DDX41-216ENST00000513562 S100A12P80511 92 aa5.79□□□□□ -1.48
DDX41-216ENST00000513562 C11orf86A6NJI1 115 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BKO60814 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BJP06899 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 LINC00614P0C842 121 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BOP23527 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BBP33778 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 NDUFA6P56556 154 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BDP58876 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BCP62807 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST2H2BEQ16778 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.78□□□□□ -1.48
DDX41-216ENST00000513562 HIST1H2BHQ93079 126 aa5.78□□□□□ -1.48
DDX41-216ENST00000513562 CHCHD1Q96BP2 118 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms