RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CTXND1A0A1B0GTU2 59 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 E2F6O75461 281 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 IFNA17P01571 189 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 PIRTP0C851 137 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 CMPK1P30085 196 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 UBE2G1P62253 170 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 DEFB133Q30KQ1 61 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 TMEM128Q5BJH2 165 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 C9orf116Q5BN46 136 aaPredicted RBP-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 SPANXN1Q5VSR9 72 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 PPP1R2P3Q6NXS1 205 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 NAA60Q9H7X0 242 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 MYH8P13535 1937 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 MYH13Q9UKX3 1938 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 A0A0G2JMZ2 1700 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 LRRC37A2A6NM11 1700 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 LRRC37AA6NMS7 1700 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 KIAA1551Q9HCM1 1747 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 CCDC180Q9P1Z9 1646 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 NFAT5O94916 1531 aa-0.64□□□□□ -2.51
PDGFC-208ENST00000512711 KIF21AQ7Z4S6 1674 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 TIAM1Q13009 1591 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 DIP2CQ9Y2E4 1556 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 H0YJX3 145 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 M0R129 80 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 PPP1R17O96001 155 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 CBLN1P23435 193 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 S100GP29377 79 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 GNG10P50151 68 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 RPS28P62857 69 aaKnown RBP-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 LINC01556Q5JQF7 62 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 MIC13Q5XKP0 118 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 C6orf201Q7Z4U5 140 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 CTAGE3PQ8IX95 158 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 TCTE3Q8IZS6 198 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 DEFB106AQ8N104 65 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 VSTM2AQ8TAG5 236 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 SMIM4Q8WVI0 70 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 MAGOHBQ96A72 148 aaKnown RBP-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 PSMG3Q9BT73 122 aaPredicted RBP-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 CENPHQ9H3R5 247 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 LINC00312Q9Y6C7 94 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 SCRIBQ14160 1630 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 PDCD11Q14690 1871 aaKnown RBP-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 SHPRHQ149N8 1683 aa-0.65□□□□□ -2.51
PDGFC-208ENST00000512711 MYH6P13533 1939 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 PATJQ8NI35 1801 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 ATP7BP35670 1465 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 MON2Q7Z3U7 1717 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 XRN1Q8IZH2 1706 aaKnown RBP-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 LRRIQ1Q96JM4 1722 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 DEPDC5O75140 1603 aa-0.66□□□□□ -2.51
PDGFC-208ENST00000512711 UBE2L5PA0A1B0GUS4 154 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 A0A1B0GV72 72 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 CPSF4LA6NMK7 179 aaKnown RBP-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 E5RI56 91 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 K7EP13 123 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 M0R135 149 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 TNFSF15O95150 251 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 HTN1P15515 57 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 CCL18P55774 89 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 NCS1P62166 190 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 UBA52P62987 128 aaKnown RBP-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 S100A7L2Q5SY68 101 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 Q6JHZ5 121 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 TOMM20LQ6UXN7 152 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 CDC26Q8NHZ8 85 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 R4GMQ9 66 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 NEXMIFQ5QGS0 1516 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 SCN11AQ9UI33 1791 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 NSD3Q9BZ95 1437 aa-0.66□□□□□ -2.52
PDGFC-208ENST00000512711 CD163L1Q9NR16 1453 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 WIZO95785 1651 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 KIF1AQ12756 1690 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 TRAV36DV7A0A075B6V5 113 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 IFNGP01579 166 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 IL5P05113 134 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 DEFB130BP0DP73 79 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 DEFB130AP0DP74 79 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 TMEM170BQ5T4T1 132 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 Q6ZUT4 128 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 HIGD1AQ9Y241 93 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 KIF20BQ96Q89 1820 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 THOC2Q8NI27 1593 aaKnown RBP-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 RICTORQ6R327 1708 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 RAPGEF6Q8TEU7 1601 aa-0.67□□□□□ -2.52
PDGFC-208ENST00000512711 ERICH3Q5RHP9 1530 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 EHBP1L1Q8N3D4 1523 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 ALS2Q96Q42 1657 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 FAM208AQ9UK61 1670 aaKnown RBP-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 A0A096LNI7 61 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 DEFB131BA0A096LNP1 70 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 OVOS2A0A0J9YW53 1432 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 HCG22E2RYF7 251 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 H3BSH0 61 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 SYS1-DBNDD2H3BUS1 97 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 NDUFC1O43677 76 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 SNCGO76070 127 aa-0.68□□□□□ -2.52
PDGFC-208ENST00000512711 PIPP12273 146 aaPredicted RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms