RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	TMEM256-PLSCR3	K7ERE1	68 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	UBE2L6	O14933	153 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	ERC2-IT1	O76042	136 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	SYCN	Q0VAF6	134 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	DEFB116	Q30KQ4	102 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620		Q8N814	137 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	BPESC1	Q9GZL8	116 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	ANAPC11	Q9NYG5	84 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	TOMM7	Q9P0U1	55 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	VCAN	P13611	3396 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	FREM2	Q5SZK8	3169 aa		2.26	□□□□□ -2.05
CAST-238	ENST00000512620	CEP250	Q9BV73	2442 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	IGHV6-1	A0A0B4J1U7	121 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	TRAV10	A0A0B4J240	114 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	RBM3	P98179	157 aa	Known RBP	2.25	□□□□□ -2.05
CAST-238	ENST00000512620	LCE3E	Q5T5B0	92 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620		Q6ZQT0	140 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	TM2D3	Q9BRN9	247 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	CNOT1	A5YKK6	2376 aa	Known RBP	2.25	□□□□□ -2.05
CAST-238	ENST00000512620	APC2	O95996	2303 aa		2.25	□□□□□ -2.05
CAST-238	ENST00000512620	TNRC18	O15417	2968 aa	Predicted RBP	2.24	□□□□□ -2.05
CAST-238	ENST00000512620		A0A096LNT2	108 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	TRGV1	A0A0A0MS02	117 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620		F8WEM9	126 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620		Q1T7F1	81 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	C10orf99	Q6UWK7	81 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620		Q6ZTI0	123 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	DEFB123	Q8N688	67 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	DYNLRB2	Q8TF09	96 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	RMI2	Q96E14	147 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	LINC00474	Q9P2X8	69 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	PRUNE2	Q8WUY3	3088 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	KALRN	O60229	2985 aa		2.24	□□□□□ -2.05
CAST-238	ENST00000512620	ABCA2	Q9BZC7	2435 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	IGKV3OR2-268	A0A0C4DH90	116 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620		H3BQ85	93 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	MIF	P14174	115 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	PDE6G	P18545	87 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	HAMP	P81172	84 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	NREP	Q16612	68 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	ESRG	Q1W209	222 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	LINC00575	Q6W349	94 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620		Q8IZM0	81 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	C8orf17	Q9NRJ1	99 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	SNURF	Q9Y675	71 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	ZDBF2	Q9HCK1	2354 aa		2.23	□□□□□ -2.05
CAST-238	ENST00000512620	PTPRQ	Q9UMZ3	2332 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	VPS13A	Q96RL7	3174 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	IGLV4-60	A0A075B6I1	120 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	TRBV6-8	A0A0A6YYG3	113 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	TRBV7-4	A0A0J9YYF1	115 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	LINC00959	A0A1B0GUT2	108 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	MSMB	P08118	114 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	DAD1	P61803	113 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	COX17	Q14061	63 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	DEFB114	Q30KQ6	69 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	KTN1-AS1	Q86SY8	53 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	C11orf68	Q9H3H3	251 aa	Known RBP	2.22	□□□□□ -2.05
CAST-238	ENST00000512620	RBM12B-AS1	Q9P1G2	102 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	PIEZO2	Q9H5I5	2752 aa		2.22	□□□□□ -2.05
CAST-238	ENST00000512620	DMXL2	Q8TDJ6	3036 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	EYS	Q5T1H1	3165 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	SPTBN1	Q01082	2364 aa	Known RBP	2.21	□□□□□ -2.06
CAST-238	ENST00000512620	TRGV4	A0A0C4DH28	118 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620		M0R2N4	97 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	DEFB112	Q30KQ8	113 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	PHF5A	Q7RTV0	110 aa	Known RBP	2.21	□□□□□ -2.06
CAST-238	ENST00000512620		Q8N9L7	120 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	MUC7	Q8TAX7	377 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	TMEM254	Q8TBM7	123 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	LINC00588	Q9Y4M8	146 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	CELSR3	Q9NYQ7	3312 aa		2.21	□□□□□ -2.06
CAST-238	ENST00000512620	TPR	P12270	2363 aa	Known RBP	2.21	□□□□□ -2.06
CAST-238	ENST00000512620	CACNA1B	Q00975	2339 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	WDFY3	Q8IZQ1	3526 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	SORL1	Q92673	2214 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	TRGV2	A0A075B6R0	118 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620		B4DSR2	109 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620		M0R378	163 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	FUS	P35637	526 aa	Known RBP eCLIP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	CMC4	P56277	68 aa	Predicted RBP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	UBE2B	P63146	152 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	DEFB136	Q30KP8	78 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	FAM229B	Q4G0N7	80 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	C4orf3	Q8WVX3	66 aa		2.2	□□□□□ -2.06
CAST-238	ENST00000512620	NOP10	Q9NPE3	64 aa	Known RBP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	RP1L1	Q8IWN7	2480 aa	Predicted RBP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	PRRC2C	Q9Y520	2896 aa	Known RBP	2.2	□□□□□ -2.06
CAST-238	ENST00000512620	EP300	Q09472	2414 aa	Predicted RBP	2.19	□□□□□ -2.06
CAST-238	ENST00000512620	CR1	P17927	2039 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	TRIOBP	Q9H2D6	2365 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	hDV103S1	A0JD37	113 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	C19orf84	I3L1E1	186 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	IGLV6-57	P01721	117 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620		Q5W150	140 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	ATP11AUN	Q6ZP68	121 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	SCX	Q7RTU7	201 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620		Q8NDZ9	215 aa		2.19	□□□□□ -2.06
CAST-238	ENST00000512620	CIRBP-AS1	Q8TBR5	109 aa		2.19	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms