RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 S100A13Q99584 98 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 ST20Q9HBF5 79 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 HRNRQ86YZ3 2850 aaPredicted RBP0.12□□□□□ -2.39
PDGFC-207ENST00000511985 TCHHQ07283 1943 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 CELSR2Q9HCU4 2923 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 ZFHX3Q15911 3703 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 CLIP1P30622 1438 aa0.12□□□□□ -2.39
PDGFC-207ENST00000511985 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
PDGFC-207ENST00000511985 C5P01031 1676 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 MYO7BQ6PIF6 2116 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 C2CD3Q4AC94 2353 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 ARHGAP35Q9NRY4 1499 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 CCL22O00626 93 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 ADIRFQ15847 76 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 APLNQ9ULZ1 77 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 KIF14Q15058 1648 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 ALKQ9UM73 1620 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
PDGFC-207ENST00000511985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.11□□□□□ -2.39
PDGFC-207ENST00000511985 GOLGA4Q13439 2230 aaKnown RBP0.1□□□□□ -2.39
PDGFC-207ENST00000511985 MAP3K4Q9Y6R4 1608 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 TRAV21A0A0B4J279 112 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 KLK9Q2XQG4 91 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 H1FX-AS1Q4G0G2 97 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 GAFA1Q96PS6 74 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 FXYD6Q9H0Q3 95 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
PDGFC-207ENST00000511985 LRRC7Q96NW7 1537 aa0.09□□□□□ -2.39
PDGFC-207ENST00000511985 NDUFB1O75438 58 aa0.09□□□□□ -2.4
PDGFC-207ENST00000511985 PRM1P04553 51 aa0.09□□□□□ -2.4
PDGFC-207ENST00000511985 DEFB121Q5J5C9 76 aa0.09□□□□□ -2.4
PDGFC-207ENST00000511985 HIVEP3Q5T1R4 2406 aa0.09□□□□□ -2.4
PDGFC-207ENST00000511985 USP32Q8NFA0 1604 aa0.09□□□□□ -2.4
PDGFC-207ENST00000511985 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 URB2Q14146 1524 aaKnown RBP0.08□□□□□ -2.4
PDGFC-207ENST00000511985 CRYBG1Q9Y4K1 1723 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 SPRR2DP22532 72 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 RPL38P63173 70 aaKnown RBP0.08□□□□□ -2.4
PDGFC-207ENST00000511985 COX6B2Q6YFQ2 88 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 CHD9Q3L8U1 2897 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 SCRIBQ14160 1630 aa0.08□□□□□ -2.4
PDGFC-207ENST00000511985 UBR1Q8IWV7 1749 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 ANKRD17O75179 2603 aaKnown RBP0.07□□□□□ -2.4
PDGFC-207ENST00000511985 TMEM131LA2VDJ0 1609 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 ANK2Q01484 3957 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 H3BUT2 72 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 BVES-AS1Q5T3Y7 98 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 ATP5EP2Q5VTU8 51 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 WFDC9Q8NEX5 89 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 CDKN2A-AS1Q9UH64 79 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 NCOA2Q15596 1464 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 DNAJC13O75165 2243 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 USF3Q68DE3 2245 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 DCAF1Q9Y4B6 1507 aa0.07□□□□□ -2.4
PDGFC-207ENST00000511985 AKAP6Q13023 2319 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 LCE6AA0A183 80 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 LELP1Q5T871 98 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 FMN2Q9NZ56 1722 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 ABCC1P33527 1531 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 KDM5DQ9BY66 1539 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 DIP2BQ9P265 1576 aa0.06□□□□□ -2.4
PDGFC-207ENST00000511985 CEP170BQ9Y4F5 1589 aaPredicted RBP0.06□□□□□ -2.4
PDGFC-207ENST00000511985 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 TENM4Q6N022 2769 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 UMAD1C9J7I0 102 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 IFI6P09912 130 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 HEPN1Q6WQI6 88 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 MYCBP2O75592 4640 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 LPAP08519 4548 aa0.05□□□□□ -2.4
PDGFC-207ENST00000511985 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
PDGFC-207ENST00000511985 CSMD3Q7Z407 3707 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 CCDC88BA6NC98 1476 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 PPLO60437 1756 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 RGPD4Q7Z3J3 1758 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 MAGI3Q5TCQ9 1506 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 LOC730098B7Z3J9 87 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 C18orf32Q8TCD1 76 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
PDGFC-207ENST00000511985 PTPRQQ9UMZ3 2332 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 RGPD1P0DJD0 1748 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 TNXBP22105 4242 aa0.04□□□□□ -2.4
PDGFC-207ENST00000511985 HUWE1Q7Z6Z7 4374 aaKnown RBP0.03□□□□□ -2.4
PDGFC-207ENST00000511985 PKDREJQ9NTG1 2253 aa0.03□□□□□ -2.4
PDGFC-207ENST00000511985 SPTBN1Q01082 2364 aaKnown RBP0.03□□□□□ -2.4
PDGFC-207ENST00000511985 CACNA1AO00555 2505 aa0.03□□□□□ -2.4
PDGFC-207ENST00000511985 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.4
PDGFC-207ENST00000511985 M0R2T5 61 aa0.03□□□□□ -2.4
PDGFC-207ENST00000511985 IFI27P40305 119 aaPredicted RBP0.03□□□□□ -2.4
PDGFC-207ENST00000511985 WFDC13Q8IUB5 93 aa0.03□□□□□ -2.4
PDGFC-207ENST00000511985 PLCE1Q9P212 2302 aa0.03□□□□□ -2.41
PDGFC-207ENST00000511985 ANKARQ7Z5J8 1434 aa0.03□□□□□ -2.41
PDGFC-207ENST00000511985 CFAP74Q9C0B2 1584 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 PIEZO2Q9H5I5 2752 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 PREX1Q8TCU6 1659 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 RGPD3A6NKT7 1758 aaPredicted RBP0.02□□□□□ -2.41
PDGFC-207ENST00000511985 TSC2P49815 1807 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 NDUFA3O95167 84 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 SMIM13P0DJ93 91 aa0.02□□□□□ -2.41
PDGFC-207ENST00000511985 HMGA1P17096 107 aaKnown RBP0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms