RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
RNF4-216ENST00000511859 FAM19A5Q7Z5A7 132 aaPredicted RBP6.78□□□□□ -1.32
RNF4-216ENST00000511859 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
RNF4-216ENST00000511859 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
RNF4-216ENST00000511859 C4orf48Q5BLP8 95 aa6.77□□□□□ -1.33
RNF4-216ENST00000511859 XP32Q5T750 250 aa6.77□□□□□ -1.33
RNF4-216ENST00000511859 PACRGQ96M98 296 aaPredicted RBP6.77□□□□□ -1.33
RNF4-216ENST00000511859 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 H3BRM9 83 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 M0QXV9 152 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 CRYGAP11844 174 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 OR10D4PQ8NGN7 298 aa6.76□□□□□ -1.33
RNF4-216ENST00000511859 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 A0A087X002 238 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 NDUFA1O15239 70 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 DPM2O94777 84 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 IGKCP01834 107 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 PET117Q6UWS5 81 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
RNF4-216ENST00000511859 A6NJY4 79 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 PRSS2P07478 247 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 GAGE2EQ4V326 116 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 C2orf82Q6UX34 121 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 GAGE2DQ9UEU5 116 aa6.74□□□□□ -1.33
RNF4-216ENST00000511859 TMEM223A0PJW6 202 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 PLNP26678 52 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 C6orf226Q5I0X4 101 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 LINC01561Q8N1V8 128 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 COX7B2Q8TF08 81 aa6.73□□□□□ -1.33
RNF4-216ENST00000511859 CTAG1AP78358 180 aa6.72□□□□□ -1.33
RNF4-216ENST00000511859 C10orf25Q5T742 122 aa6.72□□□□□ -1.33
RNF4-216ENST00000511859 UNQ6190/PRO20217Q6UXQ8 127 aa6.72□□□□□ -1.33
RNF4-216ENST00000511859 C20orf202A1L168 122 aa6.71□□□□□ -1.33
RNF4-216ENST00000511859 Q8IZM0 81 aa6.71□□□□□ -1.33
RNF4-216ENST00000511859 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
RNF4-216ENST00000511859 CKS1BP61024 79 aa6.7□□□□□ -1.34
RNF4-216ENST00000511859 C6orf48Q9UBA6 75 aa6.7□□□□□ -1.34
RNF4-216ENST00000511859 SCGB1D1O95968 90 aa6.69□□□□□ -1.34
RNF4-216ENST00000511859 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
RNF4-216ENST00000511859 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
RNF4-216ENST00000511859 TSPEAR-AS2P59090 65 aa6.69□□□□□ -1.34
RNF4-216ENST00000511859 HERVK_113P61574 105 aa6.69□□□□□ -1.34
RNF4-216ENST00000511859 ZNF625Q96I27 306 aaPredicted RBP6.69□□□□□ -1.34
RNF4-216ENST00000511859 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
RNF4-216ENST00000511859 LEPROTO15243 131 aa6.68□□□□□ -1.34
RNF4-216ENST00000511859 LBHQ53QV2 105 aaPredicted RBP6.68□□□□□ -1.34
RNF4-216ENST00000511859 TRBV30A0A0K0K1B3 111 aa6.67□□□□□ -1.34
RNF4-216ENST00000511859 NDUFC2-KCTD14E9PQ53 114 aa6.67□□□□□ -1.34
RNF4-216ENST00000511859 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
RNF4-216ENST00000511859 C9orf129Q5T035 196 aaKnown RBP6.67□□□□□ -1.34
RNF4-216ENST00000511859 J3QQQ9 107 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 CXCL5P42830 114 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 KRTAP13-2Q52LG2 175 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
RNF4-216ENST00000511859 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 E9PLD3 99 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 LGALS3P17931 250 aaKnown RBP6.65□□□□□ -1.35
RNF4-216ENST00000511859 PFN2P35080 140 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 AKR1D1P51857 326 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 LINC00337Q8N6G1 96 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.35
RNF4-216ENST00000511859 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
RNF4-216ENST00000511859 BCE1O60756 84 aa6.64□□□□□ -1.35
RNF4-216ENST00000511859 NMUP48645 174 aa6.63□□□□□ -1.35
RNF4-216ENST00000511859 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
RNF4-216ENST00000511859 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
RNF4-216ENST00000511859 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
RNF4-216ENST00000511859 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
RNF4-216ENST00000511859 HSBP1L1C9JCN9 74 aa6.61□□□□□ -1.35
RNF4-216ENST00000511859 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
RNF4-216ENST00000511859 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
RNF4-216ENST00000511859 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
RNF4-216ENST00000511859 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
RNF4-216ENST00000511859 XAGE1AQ9HD64 81 aa6.61□□□□□ -1.35
RNF4-216ENST00000511859 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
RNF4-216ENST00000511859 ZNF815PA8K554 130 aa6.6□□□□□ -1.35
RNF4-216ENST00000511859 SMIM13P0DJ93 91 aa6.6□□□□□ -1.35
RNF4-216ENST00000511859 LINC00158P58513 81 aa6.6□□□□□ -1.35
RNF4-216ENST00000511859 PCP2Q8IVA1 136 aa6.6□□□□□ -1.35
RNF4-216ENST00000511859 HERV-K104P63124 156 aa6.59□□□□□ -1.35
RNF4-216ENST00000511859 MRPL55Q7Z7F7 128 aaKnown RBP6.59□□□□□ -1.35
RNF4-216ENST00000511859 PAM16Q9Y3D7 125 aa6.59□□□□□ -1.35
RNF4-216ENST00000511859 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
RNF4-216ENST00000511859 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
RNF4-216ENST00000511859 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
RNF4-216ENST00000511859 DAND5Q8N907 189 aa6.58□□□□□ -1.36
RNF4-216ENST00000511859 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
RNF4-216ENST00000511859 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 SPATA45Q537H7 98 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms