RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 AKAP14Q86UN6 197 aa7.29□□□□□ -1.24
POLR2J3-216ENST00000511773 IGLV9-49A0A0B4J1Y8 123 aa7.28□□□□□ -1.24
POLR2J3-216ENST00000511773 MOBPQ13875 183 aa7.28□□□□□ -1.24
POLR2J3-216ENST00000511773 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
POLR2J3-216ENST00000511773 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
POLR2J3-216ENST00000511773 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
POLR2J3-216ENST00000511773 H3BRM9 83 aa7.27□□□□□ -1.25
POLR2J3-216ENST00000511773 SLC25A20O43772 301 aa7.27□□□□□ -1.25
POLR2J3-216ENST00000511773 PEA15Q15121 130 aa7.27□□□□□ -1.25
POLR2J3-216ENST00000511773 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
POLR2J3-216ENST00000511773 M0R2T5 61 aa7.26□□□□□ -1.25
POLR2J3-216ENST00000511773 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
POLR2J3-216ENST00000511773 SMCR5Q8TEV8 140 aa7.26□□□□□ -1.25
POLR2J3-216ENST00000511773 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
POLR2J3-216ENST00000511773 GAGE2AQ6NT46 116 aa7.25□□□□□ -1.25
POLR2J3-216ENST00000511773 IGLV5-39A0A0G2JS06 123 aa7.24□□□□□ -1.25
POLR2J3-216ENST00000511773 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
POLR2J3-216ENST00000511773 COX17Q14061 63 aa7.24□□□□□ -1.25
POLR2J3-216ENST00000511773 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
POLR2J3-216ENST00000511773 PMVKQ15126 192 aa7.23□□□□□ -1.25
POLR2J3-216ENST00000511773 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
POLR2J3-216ENST00000511773 ETDCA0A1B0GVM5 59 aa7.22□□□□□ -1.25
POLR2J3-216ENST00000511773 PRYO14603 147 aa7.22□□□□□ -1.25
POLR2J3-216ENST00000511773 KIAA1644Q3SXP7 199 aa7.22□□□□□ -1.25
POLR2J3-216ENST00000511773 hCG_2014768A0A024R1R8 64 aa7.2□□□□□ -1.26
POLR2J3-216ENST00000511773 A0A0U1RRA0 63 aa7.2□□□□□ -1.26
POLR2J3-216ENST00000511773 NCR3O14931 201 aa7.2□□□□□ -1.26
POLR2J3-216ENST00000511773 LINC00158P58513 81 aa7.2□□□□□ -1.26
POLR2J3-216ENST00000511773 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
POLR2J3-216ENST00000511773 IGLC3P0DOY3 106 aa7.19□□□□□ -1.26
POLR2J3-216ENST00000511773 ZNF22P17026 224 aaPredicted RBP7.19□□□□□ -1.26
POLR2J3-216ENST00000511773 NDUFA6P56556 154 aa7.19□□□□□ -1.26
POLR2J3-216ENST00000511773 SSBP3-AS1Q7Z2R9 100 aa7.19□□□□□ -1.26
POLR2J3-216ENST00000511773 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
POLR2J3-216ENST00000511773 SPRR1AP35321 89 aa7.18□□□□□ -1.26
POLR2J3-216ENST00000511773 LINC01549A6NIU2 74 aa7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 MT-ND4LP03901 98 aa7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
POLR2J3-216ENST00000511773 BOD1L2Q8IYS8 172 aa7.16□□□□□ -1.26
POLR2J3-216ENST00000511773 ANAPC16Q96DE5 110 aa7.16□□□□□ -1.26
POLR2J3-216ENST00000511773 COX6B2Q6YFQ2 88 aa7.15□□□□□ -1.26
POLR2J3-216ENST00000511773 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
POLR2J3-216ENST00000511773 LINC01546A6NGU7 62 aa7.14□□□□□ -1.27
POLR2J3-216ENST00000511773 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
POLR2J3-216ENST00000511773 B5MCH6 92 aa7.13□□□□□ -1.27
POLR2J3-216ENST00000511773 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
POLR2J3-216ENST00000511773 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
POLR2J3-216ENST00000511773 FA2HQ7L5A8 372 aa7.13□□□□□ -1.27
POLR2J3-216ENST00000511773 SMCO4Q9NRQ5 59 aa7.13□□□□□ -1.27
POLR2J3-216ENST00000511773 SMIM13P0DJ93 91 aa7.12□□□□□ -1.27
POLR2J3-216ENST00000511773 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
POLR2J3-216ENST00000511773 S100A12P80511 92 aa7.11□□□□□ -1.27
POLR2J3-216ENST00000511773 Q9BRP9 147 aa7.11□□□□□ -1.27
POLR2J3-216ENST00000511773 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
POLR2J3-216ENST00000511773 TRAV9-1A0A075B6T8 112 aa7.09□□□□□ -1.27
POLR2J3-216ENST00000511773 MEIG1Q5JSS6 88 aa7.09□□□□□ -1.27
POLR2J3-216ENST00000511773 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
POLR2J3-216ENST00000511773 Q6ZRX8 168 aa7.08□□□□□ -1.28
POLR2J3-216ENST00000511773 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
POLR2J3-216ENST00000511773 BAGE3Q86Y29 109 aa7.07□□□□□ -1.28
POLR2J3-216ENST00000511773 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
POLR2J3-216ENST00000511773 USH2AO75445 5202 aa7.07□□□□□ -1.28
POLR2J3-216ENST00000511773 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
POLR2J3-216ENST00000511773 A0A096LNJ9 63 aa7.06□□□□□ -1.28
POLR2J3-216ENST00000511773 DDTP30046 118 aa7.05□□□□□ -1.28
POLR2J3-216ENST00000511773 PMCHL1Q16048 86 aa7.05□□□□□ -1.28
POLR2J3-216ENST00000511773 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
POLR2J3-216ENST00000511773 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
POLR2J3-216ENST00000511773 HBDP02042 147 aa7.02□□□□□ -1.29
POLR2J3-216ENST00000511773 FABP9Q0Z7S8 132 aa7.02□□□□□ -1.29
POLR2J3-216ENST00000511773 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
POLR2J3-216ENST00000511773 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
POLR2J3-216ENST00000511773 HERV-K104P63124 156 aa7□□□□□ -1.29
POLR2J3-216ENST00000511773 JOSD1Q15040 202 aaPredicted RBP7□□□□□ -1.29
POLR2J3-216ENST00000511773 Q6Q795 121 aa7□□□□□ -1.29
POLR2J3-216ENST00000511773 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
POLR2J3-216ENST00000511773 S100A7L2Q5SY68 101 aa6.99□□□□□ -1.29
POLR2J3-216ENST00000511773 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
POLR2J3-216ENST00000511773 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
POLR2J3-216ENST00000511773 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
POLR2J3-216ENST00000511773 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
POLR2J3-216ENST00000511773 H7C2G1 150 aa6.98□□□□□ -1.29
POLR2J3-216ENST00000511773 S100PP25815 95 aa6.98□□□□□ -1.29
POLR2J3-216ENST00000511773 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
POLR2J3-216ENST00000511773 LINC00587B1AMM8 73 aa6.97□□□□□ -1.29
POLR2J3-216ENST00000511773 LINC00614P0C842 121 aa6.97□□□□□ -1.29
POLR2J3-216ENST00000511773 SPANXB1Q9NS25 103 aaPredicted RBP6.97□□□□□ -1.29
POLR2J3-216ENST00000511773 C18orf32Q8TCD1 76 aa6.96□□□□□ -1.3
POLR2J3-216ENST00000511773 SEC11CQ9BY50 192 aa6.96□□□□□ -1.3
POLR2J3-216ENST00000511773 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
POLR2J3-216ENST00000511773 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
POLR2J3-216ENST00000511773 COX19Q49B96 90 aa6.94□□□□□ -1.3
POLR2J3-216ENST00000511773 MIEN1Q9BRT3 115 aa6.94□□□□□ -1.3
POLR2J3-216ENST00000511773 CFC1P0CG37 223 aa6.93□□□□□ -1.3
POLR2J3-216ENST00000511773 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
POLR2J3-216ENST00000511773 LOC107984156A0A0G2JMH3 177 aa6.92□□□□□ -1.3
POLR2J3-216ENST00000511773 TSPEAR-AS2P59090 65 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms