RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 AQP4P55087 323 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 KHDC3LQ587J8 217 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 SPAG11AQ6PDA7 123 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 KRTAP26-1Q6PEX3 210 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 PHF5AQ7RTV0 110 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 Q8NDZ9 215 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 ZNF431Q8TF32 576 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 SLC25A21Q9BQT8 299 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 FAM107BQ9H098 131 aa1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 PAIP2BQ9ULR5 123 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-208ENST00000511439 J3QLW9 94 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 TMEM256-PLSCR3K7ERE1 68 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 CST7O76096 145 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 LINC00694P0DN24 101 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 MGST1P10620 155 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 RPL7P18124 248 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 PKIAP61925 76 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 GNG11P61952 73 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 MSMO1Q15800 293 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 C9orf116Q5BN46 136 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 CLPSL2Q6UWE3 100 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 FAM19A2Q8N3H0 131 aa1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 ZCCHC13Q8WW36 166 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-208ENST00000511439 IGKV2D-26A0A0A0MRZ7 120 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 S100A11P31949 105 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 HINT1P49773 126 aaPredicted RBP1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 NDUFA6P56556 154 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 UBE2D3P61077 147 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 CCDC58Q4VC31 144 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 TMEM229BQ8NBD8 167 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 Q9BRP9 147 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 NDUFB11Q9NX14 153 aa1.53□□□□□ -2.16
TOPBP1-208ENST00000511439 TRBV7-6A0A0J9YX20 115 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 LOC107984640A0A0U1RRK4 108 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 PNMA8CA0A1B0GUJ8 204 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 SNRPGP15A8MWD9 76 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 GABARAPH6UMI1 98 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 M0R129 80 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 M0R2P5 195 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 HIST1H2BKO60814 126 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 HIST1H2BJP06899 126 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 SDC2P34741 201 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 RPL35P42766 123 aaKnown RBP1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 TMEM258P61165 79 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 CARD19Q96LW7 228 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 PFDN5Q99471 154 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 OTORQ9NRC9 128 aa1.52□□□□□ -2.17
TOPBP1-208ENST00000511439 IGHV1-58A0A0C4DH39 117 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 MUC21A0A140T8X8 626 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 HMSDA8MTL9 139 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 A8MWV9 139 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 DPM2O94777 84 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 GPX1P07203 203 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 AKR1C3P42330 323 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 CKS1BP61024 79 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 HBBP68871 147 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 HSD17B12Q53GQ0 312 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 SPANXN5Q5MJ07 72 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 LCN15Q6UWW0 184 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 LINC00269Q8N2A0 174 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 PDCD10Q9BUL8 212 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 NPCDR1Q9BY65 106 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 LPAR5Q9H1C0 372 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 COPZ2Q9P299 210 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 NAT8BQ9UHF3 227 aa1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
TOPBP1-208ENST00000511439 GVQW2A0A096LPI5 108 aaPredicted RBP1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 C20orf202A1L168 122 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 FAM24AA6NFZ4 105 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 CFDP00746 253 aaPredicted RBP1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 CXCL1P09341 107 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 TRGC1P0CF51 173 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 COX4I1P13073 169 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 TMBIM6P55061 237 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 CFAP126Q5VTH2 177 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 HRCT1Q6UXD1 115 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 TCTE3Q8IZS6 198 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 ACBD7Q8N6N7 88 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 C20orf166-AS1Q96NR2 134 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 HSPB8Q9UJY1 196 aa1.5□□□□□ -2.17
TOPBP1-208ENST00000511439 C9JAW5 83 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 FNDC10F2Z333 226 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 TIMM17BO60830 172 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 PMP2P02689 132 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 NMBP08949 121 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 BAALC-AS2P0C853 105 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 FABP2P12104 132 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 RAB5CP51148 216 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 SOSTDC1Q6X4U4 206 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 ZNF818PQ6ZRF7 136 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 HIGD1AQ9Y241 93 aa1.49□□□□□ -2.17
TOPBP1-208ENST00000511439 TMSB15BA0A087X1C1 80 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 TRAV13-1A0A0B4J241 112 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 H3BRN7 92 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 J3QQQ9 107 aa1.48□□□□□ -2.17
TOPBP1-208ENST00000511439 J3QRE1 110 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms