RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 TRIQKQ629K1 86 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 TEX261Q6UWH6 196 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 SSBP3-AS1Q7Z2R9 100 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 LINC01551Q86U37 167 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 TCEAL7Q9BRU2 100 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 TIMM21Q9BVV7 248 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 CNFNQ9BYD5 112 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 NUDT15Q9NV35 164 aa2.9□□□□□ -1.95
USP53-206ENST00000510737 A0A0U1RRA0 63 aa2.89□□□□□ -1.95
USP53-206ENST00000510737 CTXND1A0A1B0GTU2 59 aa2.89□□□□□ -1.95
USP53-206ENST00000510737 RAB19A4D1S5 217 aa2.89□□□□□ -1.95
USP53-206ENST00000510737 C20orf202A1L168 122 aa2.88□□□□□ -1.95
USP53-206ENST00000510737 E9PLD3 99 aa2.88□□□□□ -1.95
USP53-206ENST00000510737 CKS1BP61024 79 aa2.88□□□□□ -1.95
USP53-206ENST00000510737 SMAGPQ0VAQ4 97 aa2.88□□□□□ -1.95
USP53-206ENST00000510737 C6orf226Q5I0X4 101 aa2.88□□□□□ -1.95
USP53-206ENST00000510737 GEMIN7Q9H840 131 aaKnown RBP2.88□□□□□ -1.95
USP53-206ENST00000510737 CHTOPQ9Y3Y2 248 aaKnown RBP2.88□□□□□ -1.95
USP53-206ENST00000510737 TGIF2-C20orf24A0A0A6YYL0 155 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 LYRM1O43325 122 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 IL7P13232 177 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 FCER1GP30273 86 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 RPL35P42766 123 aaKnown RBP2.87□□□□□ -1.95
USP53-206ENST00000510737 RPL39P62891 51 aaKnown RBP2.87□□□□□ -1.95
USP53-206ENST00000510737 LINC00483Q53H64 154 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 SMCR5Q8TEV8 140 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 TOMM7Q9P0U1 55 aa2.87□□□□□ -1.95
USP53-206ENST00000510737 ZNF706Q9Y5V0 76 aaPredicted RBP2.87□□□□□ -1.95
USP53-206ENST00000510737 XKRY2A2RUG3 117 aa2.86□□□□□ -1.95
USP53-206ENST00000510737 S100A5P33763 92 aa2.86□□□□□ -1.95
USP53-206ENST00000510737 MRPS36P82909 103 aaKnown RBP2.86□□□□□ -1.95
USP53-206ENST00000510737 LINC01561Q8N1V8 128 aa2.86□□□□□ -1.95
USP53-206ENST00000510737 MAP1LC3B2A6NCE7 125 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 F8VRH5 84 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 RAB4AP20338 218 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 HBBP68871 147 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 SMIM15Q7Z3B0 74 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 Q8IZM0 81 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 MAP1LC3BQ9GZQ8 125 aa2.85□□□□□ -1.95
USP53-206ENST00000510737 A0A096LNJ9 63 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 SMKR1H3BMG3 65 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 RAB5BP61020 215 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 CENPWQ5EE01 88 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 Q5W150 140 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 Q6ZN92 141 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 FAM231DQ6ZW35 169 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 MED9Q9NWA0 146 aa2.84□□□□□ -1.95
USP53-206ENST00000510737 PET100P0DJ07 73 aa2.83□□□□□ -1.96
USP53-206ENST00000510737 RPL7L1Q6DKI1 246 aaKnown RBP2.83□□□□□ -1.96
USP53-206ENST00000510737 Q8NDZ9 215 aa2.83□□□□□ -1.96
USP53-206ENST00000510737 TIMM17AQ99595 171 aa2.83□□□□□ -1.96
USP53-206ENST00000510737 SPANXA1Q9NS26 97 aa2.83□□□□□ -1.96
USP53-206ENST00000510737 FAM19A3Q7Z5A8 133 aa2.82□□□□□ -1.96
USP53-206ENST00000510737 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
USP53-206ENST00000510737 TRBV20OR9-2A0A075B6H5 130 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 A0A1B0GV50 99 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 FAM240BA0A1B0GVZ2 78 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 ERC2-IT1O76042 136 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 AKR1C8PQ5T2L2 129 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 AMN1Q8IY45 258 aa2.81□□□□□ -1.96
USP53-206ENST00000510737 PFDN1O60925 122 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 GNG4P50150 75 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 CCL20P78556 96 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 AKAP14Q86UN6 197 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 MBD3L1Q8WWY6 194 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 TMEM191AQ9H0A3 160 aa2.8□□□□□ -1.96
USP53-206ENST00000510737 RAB14P61106 215 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 KCNRGQ8N5I3 272 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 SFT2D1Q8WV19 159 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 SMIM12Q96EX1 92 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 EIF5A2Q9GZV4 153 aaKnown RBP2.79□□□□□ -1.96
USP53-206ENST00000510737 CDKN2A-AS1Q9UH64 79 aa2.79□□□□□ -1.96
USP53-206ENST00000510737 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 A6NN06 94 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 A8MWL6 223 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 K7EN84 100 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 PPP1R2P9O14990 202 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 TCAPO15273 167 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 GIPP09681 153 aaPredicted RBP2.78□□□□□ -1.96
USP53-206ENST00000510737 SPRR2EP22531 72 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 SPRR1AP35321 89 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 SPRR2BP35325 72 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 SPRR2AP35326 72 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 Q5BKY6 102 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 C9orf153Q5TBE3 101 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 C1orf195Q5TG92 126 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 ATP11AUNQ6ZP68 121 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 SND1-IT1Q9HBX3 110 aa2.78□□□□□ -1.96
USP53-206ENST00000510737 BORCS7-ASMTA0A0B4J1R7 106 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 NOL3O60936 208 aaKnown RBP2.77□□□□□ -1.97
USP53-206ENST00000510737 PPP1R17O96001 155 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 IFI27P40305 119 aaPredicted RBP2.77□□□□□ -1.97
USP53-206ENST00000510737 CXCL5P42830 114 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 TMEM141Q96I45 108 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 AMELXQ99217 191 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 C20orf78Q9BR46 151 aa2.77□□□□□ -1.97
USP53-206ENST00000510737 BIN3Q9NQY0 253 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms