RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TMEM238C9JI98 176 aa13.57□□□□□ -0.24
SNF8-209ENST00000510558 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
SNF8-209ENST00000510558 LPAP08519 4548 aa13.56□□□□□ -0.24
SNF8-209ENST00000510558 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
SNF8-209ENST00000510558 ANAPC11Q9NYG5 84 aa13.56□□□□□ -0.24
SNF8-209ENST00000510558 PRLHP81277 87 aa13.55□□□□□ -0.24
SNF8-209ENST00000510558 FAM19A1Q7Z5A9 133 aa13.55□□□□□ -0.24
SNF8-209ENST00000510558 TYMSOSQ8TAI1 123 aa13.54□□□□□ -0.24
SNF8-209ENST00000510558 RNF213Q63HN8 5207 aa13.54□□□□□ -0.24
SNF8-209ENST00000510558 H0Y8G0 127 aa13.53□□□□□ -0.24
SNF8-209ENST00000510558 M0R378 163 aa13.53□□□□□ -0.24
SNF8-209ENST00000510558 SERF1AO75920 110 aa13.52□□□□□ -0.25
SNF8-209ENST00000510558 SMIM13P0DJ93 91 aa13.52□□□□□ -0.25
SNF8-209ENST00000510558 LINC00310P59036 64 aa13.52□□□□□ -0.25
SNF8-209ENST00000510558 PRR4Q16378 134 aa13.52□□□□□ -0.25
SNF8-209ENST00000510558 ATP6V1G1O75348 118 aa13.51□□□□□ -0.25
SNF8-209ENST00000510558 LEPROTL1O95214 131 aa13.51□□□□□ -0.25
SNF8-209ENST00000510558 TSPAN13O95857 204 aa13.51□□□□□ -0.25
SNF8-209ENST00000510558 MEIG1Q5JSS6 88 aa13.51□□□□□ -0.25
SNF8-209ENST00000510558 SLC7A5P1Q8MH63 180 aa13.51□□□□□ -0.25
SNF8-209ENST00000510558 HERV-K104P63124 156 aa13.5□□□□□ -0.25
SNF8-209ENST00000510558 FAM229BQ4G0N7 80 aa13.5□□□□□ -0.25
SNF8-209ENST00000510558 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
SNF8-209ENST00000510558 NDUFA12Q9UI09 145 aa13.49□□□□□ -0.25
SNF8-209ENST00000510558 MIR7-3HGQ8N6C7 128 aa13.48□□□□□ -0.25
SNF8-209ENST00000510558 BOD1L2Q8IYS8 172 aa13.46□□□□□ -0.25
SNF8-209ENST00000510558 MYMXA0A1B0GTQ4 84 aa13.45□□□□□ -0.26
SNF8-209ENST00000510558 LINC00587B1AMM8 73 aa13.45□□□□□ -0.26
SNF8-209ENST00000510558 HSPB8Q9UJY1 196 aa13.45□□□□□ -0.26
SNF8-209ENST00000510558 COLCA2A8K830 154 aa13.44□□□□□ -0.26
SNF8-209ENST00000510558 TSPEAR-AS2P59090 65 aa13.44□□□□□ -0.26
SNF8-209ENST00000510558 FABP4P15090 132 aa13.43□□□□□ -0.26
SNF8-209ENST00000510558 PLNP26678 52 aa13.43□□□□□ -0.26
SNF8-209ENST00000510558 PLEKHB2Q96CS7 222 aa13.43□□□□□ -0.26
SNF8-209ENST00000510558 HIGD2AQ9BW72 106 aa13.43□□□□□ -0.26
SNF8-209ENST00000510558 IGKV2D-26A0A0A0MRZ7 120 aa13.42□□□□□ -0.26
SNF8-209ENST00000510558 NCR3O14931 201 aa13.42□□□□□ -0.26
SNF8-209ENST00000510558 LEPROTO15243 131 aa13.42□□□□□ -0.26
SNF8-209ENST00000510558 MAP1LC3CQ9BXW4 147 aa13.42□□□□□ -0.26
SNF8-209ENST00000510558 PRYO14603 147 aa13.4□□□□□ -0.26
SNF8-209ENST00000510558 DPM2O94777 84 aa13.4□□□□□ -0.26
SNF8-209ENST00000510558 PMCHL2Q9BQD1 86 aa13.4□□□□□ -0.26
SNF8-209ENST00000510558 LINC00304Q8N9R0 145 aa13.39□□□□□ -0.27
SNF8-209ENST00000510558 HERVK_113P61574 105 aa13.38□□□□□ -0.27
SNF8-209ENST00000510558 J3QQQ9 107 aa13.37□□□□□ -0.27
SNF8-209ENST00000510558 IGKCP01834 107 aa13.36□□□□□ -0.27
SNF8-209ENST00000510558 DAND5Q8N907 189 aa13.36□□□□□ -0.27
SNF8-209ENST00000510558 KCNQ1DNQ9H478 68 aa13.36□□□□□ -0.27
SNF8-209ENST00000510558 SPRR1AP35321 89 aa13.35□□□□□ -0.27
SNF8-209ENST00000510558 LINC00337Q8N6G1 96 aa13.35□□□□□ -0.27
SNF8-209ENST00000510558 TRBV10-3A0A0K0K1G6 114 aa13.34□□□□□ -0.27
SNF8-209ENST00000510558 C3orf22Q8N5N4 141 aa13.34□□□□□ -0.27
SNF8-209ENST00000510558 SPRR4Q96PI1 79 aa13.34□□□□□ -0.27
SNF8-209ENST00000510558 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.28
SNF8-209ENST00000510558 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.28
SNF8-209ENST00000510558 NMUP48645 174 aa13.33□□□□□ -0.28
SNF8-209ENST00000510558 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.28
SNF8-209ENST00000510558 ETDCA0A1B0GVM5 59 aa13.31□□□□□ -0.28
SNF8-209ENST00000510558 KRTAP4-16G5E9R7 235 aaPredicted RBP13.31□□□□□ -0.28
SNF8-209ENST00000510558 ZNF706Q9Y5V0 76 aaPredicted RBP13.31□□□□□ -0.28
SNF8-209ENST00000510558 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
SNF8-209ENST00000510558 TRBV10-2A0A0K0K1G8 114 aa13.28□□□□□ -0.28
SNF8-209ENST00000510558 S100A12P80511 92 aa13.28□□□□□ -0.28
SNF8-209ENST00000510558 SMCR5Q8TEV8 140 aa13.28□□□□□ -0.28
SNF8-209ENST00000510558 MIEN1Q9BRT3 115 aa13.28□□□□□ -0.28
SNF8-209ENST00000510558 DDTP30046 118 aa13.27□□□□□ -0.29
SNF8-209ENST00000510558 CTAG1AP78358 180 aa13.27□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BKO60814 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BJP06899 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BOP23527 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BBP33778 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BDP58876 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
SNF8-209ENST00000510558 E9PLD3 99 aa13.25□□□□□ -0.29
SNF8-209ENST00000510558 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SNF8-209ENST00000510558 SYS1-DBNDD2H3BUS1 97 aa13.24□□□□□ -0.29
SNF8-209ENST00000510558 A0A0J9YXY3 114 aa13.23□□□□□ -0.29
SNF8-209ENST00000510558 B5MCH6 92 aa13.23□□□□□ -0.29
SNF8-209ENST00000510558 NDUFC2O95298 119 aa13.23□□□□□ -0.29
SNF8-209ENST00000510558 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
SNF8-209ENST00000510558 SPAG11AQ6PDA7 123 aa13.21□□□□□ -0.29
SNF8-209ENST00000510558 SOSTDC1Q6X4U4 206 aa13.21□□□□□ -0.29
SNF8-209ENST00000510558 NPC2P61916 151 aa13.2□□□□□ -0.3
SNF8-209ENST00000510558 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
SNF8-209ENST00000510558 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
SNF8-209ENST00000510558 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
SNF8-209ENST00000510558 IGLV6-57P01721 117 aa13.19□□□□□ -0.3
SNF8-209ENST00000510558 LINC00483Q53H64 154 aa13.18□□□□□ -0.3
SNF8-209ENST00000510558 LINC01545Q5VT33 79 aa13.18□□□□□ -0.3
SNF8-209ENST00000510558 ERC2-IT1O76042 136 aa13.17□□□□□ -0.3
SNF8-209ENST00000510558 Q6ZRX8 168 aa13.17□□□□□ -0.3
SNF8-209ENST00000510558 Q8NBF4 154 aa13.17□□□□□ -0.3
SNF8-209ENST00000510558 IGLV7-46A0A075B6I9 117 aa13.16□□□□□ -0.3
SNF8-209ENST00000510558 C4orf48Q5BLP8 95 aa13.16□□□□□ -0.3
SNF8-209ENST00000510558 GAGE2AQ6NT46 116 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms