RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PMCHL2Q9BQD1 86 aa7.13□□□□□ -1.27
HMGXB3-203ENST00000510472 MAP1LC3CQ9BXW4 147 aa7.13□□□□□ -1.27
HMGXB3-203ENST00000510472 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
HMGXB3-203ENST00000510472 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 IGKCP01834 107 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 S100A1P23297 94 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 HERV-K104P63124 156 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 REG3GQ6UW15 175 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 NDUFA12Q9UI09 145 aa7.12□□□□□ -1.27
HMGXB3-203ENST00000510472 LEPROTO15243 131 aa7.11□□□□□ -1.27
HMGXB3-203ENST00000510472 LINC00158P58513 81 aa7.11□□□□□ -1.27
HMGXB3-203ENST00000510472 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
HMGXB3-203ENST00000510472 RPL37AP8A6NKH3 93 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 H0Y9J4 135 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 ZNF861PO60384 105 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 PLEKHB2Q96CS7 222 aa7.1□□□□□ -1.27
HMGXB3-203ENST00000510472 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
HMGXB3-203ENST00000510472 GAGE10A6NGK3 116 aa7.09□□□□□ -1.27
HMGXB3-203ENST00000510472 J3QQQ9 107 aa7.09□□□□□ -1.27
HMGXB3-203ENST00000510472 KRTAP1-4P0C5Y4 121 aa7.09□□□□□ -1.27
HMGXB3-203ENST00000510472 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
HMGXB3-203ENST00000510472 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 A0A0U1RRA0 63 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 BCE1O60756 84 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 ATP6V1G1O75348 118 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 HERVK_113P61574 105 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 KRTAP13-1Q8IUC0 172 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 NKAPP1Q8N9T2 125 aa7.08□□□□□ -1.28
HMGXB3-203ENST00000510472 E9PLD3 99 aa7.07□□□□□ -1.28
HMGXB3-203ENST00000510472 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
HMGXB3-203ENST00000510472 NMUP48645 174 aa7.07□□□□□ -1.28
HMGXB3-203ENST00000510472 MEIG1Q5JSS6 88 aa7.06□□□□□ -1.28
HMGXB3-203ENST00000510472 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
HMGXB3-203ENST00000510472 M0R378 163 aa7.04□□□□□ -1.28
HMGXB3-203ENST00000510472 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
HMGXB3-203ENST00000510472 LGALS3P17931 250 aaKnown RBP7.04□□□□□ -1.28
HMGXB3-203ENST00000510472 BOD1L2Q8IYS8 172 aa7.04□□□□□ -1.28
HMGXB3-203ENST00000510472 RPL28P46779 137 aaKnown RBP7.03□□□□□ -1.28
HMGXB3-203ENST00000510472 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
HMGXB3-203ENST00000510472 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 KRTDAPP60985 99 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 ADAMTSL4-AS1Q5T5F5 129 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 DAND5Q8N907 189 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
HMGXB3-203ENST00000510472 IGKV2D-26A0A0A0MRZ7 120 aa7.01□□□□□ -1.29
HMGXB3-203ENST00000510472 LITAFQ99732 161 aa7.01□□□□□ -1.29
HMGXB3-203ENST00000510472 EIF4EBP3O60516 100 aaPredicted RBP7□□□□□ -1.29
HMGXB3-203ENST00000510472 SOSTDC1Q6X4U4 206 aa7□□□□□ -1.29
HMGXB3-203ENST00000510472 HIST3H2BBQ8N257 126 aa7□□□□□ -1.29
HMGXB3-203ENST00000510472 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
HMGXB3-203ENST00000510472 SPRR1AP35321 89 aa6.99□□□□□ -1.29
HMGXB3-203ENST00000510472 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
HMGXB3-203ENST00000510472 TRBV10-2A0A0K0K1G8 114 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 KRTAP4-16G5E9R7 235 aaPredicted RBP6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 TIMM17BO60830 172 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 NDUFC2O95298 119 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 UBE2AP49459 152 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 PRLHP81277 87 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
HMGXB3-203ENST00000510472 TRBV10-3A0A0K0K1G6 114 aa6.97□□□□□ -1.29
HMGXB3-203ENST00000510472 C20orf202A1L168 122 aa6.97□□□□□ -1.29
HMGXB3-203ENST00000510472 NCR3O14931 201 aa6.97□□□□□ -1.29
HMGXB3-203ENST00000510472 FAM19A1Q7Z5A9 133 aa6.97□□□□□ -1.29
HMGXB3-203ENST00000510472 PRYO14603 147 aa6.96□□□□□ -1.3
HMGXB3-203ENST00000510472 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.3
HMGXB3-203ENST00000510472 A0A087X002 238 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 AKR1D1P51857 326 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 LINC00337Q8N6G1 96 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
HMGXB3-203ENST00000510472 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
HMGXB3-203ENST00000510472 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
HMGXB3-203ENST00000510472 C5orf52A6NGY3 159 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 CRYGAP11844 174 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 S100A2P29034 98 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 DDTP30046 118 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 FAM229BQ4G0N7 80 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 MIEN1Q9BRT3 115 aa6.93□□□□□ -1.3
HMGXB3-203ENST00000510472 S100A6P06703 90 aa6.92□□□□□ -1.3
HMGXB3-203ENST00000510472 NPC2P61916 151 aa6.92□□□□□ -1.3
HMGXB3-203ENST00000510472 SNRPEP62304 92 aaKnown RBP6.92□□□□□ -1.3
HMGXB3-203ENST00000510472 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
HMGXB3-203ENST00000510472 PCP2Q8IVA1 136 aa6.91□□□□□ -1.3
HMGXB3-203ENST00000510472 B5MCH6 92 aa6.9□□□□□ -1.3
HMGXB3-203ENST00000510472 SMCR5Q8TEV8 140 aa6.9□□□□□ -1.3
HMGXB3-203ENST00000510472 HIGD2AQ9BW72 106 aa6.9□□□□□ -1.3
HMGXB3-203ENST00000510472 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
HMGXB3-203ENST00000510472 PPDPFQ9H3Y8 114 aa6.9□□□□□ -1.3
HMGXB3-203ENST00000510472 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms