RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SND1-IT1Q9HBX3 110 aa6.04□□□□□ -1.44
DDX41-211ENST00000510171 IGKV2D-26A0A0A0MRZ7 120 aa6.03□□□□□ -1.44
DDX41-211ENST00000510171 CTAG1AP78358 180 aa6.03□□□□□ -1.44
DDX41-211ENST00000510171 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
DDX41-211ENST00000510171 CHCHD1Q96BP2 118 aaKnown RBP6.03□□□□□ -1.44
DDX41-211ENST00000510171 CHTOPQ9Y3Y2 248 aaKnown RBP6.03□□□□□ -1.44
DDX41-211ENST00000510171 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
DDX41-211ENST00000510171 IGKV2D-28P01615 120 aa6.02□□□□□ -1.45
DDX41-211ENST00000510171 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
DDX41-211ENST00000510171 VPREB1P12018 145 aa6.01□□□□□ -1.45
DDX41-211ENST00000510171 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
DDX41-211ENST00000510171 YPEL4Q96NS1 127 aa6.01□□□□□ -1.45
DDX41-211ENST00000510171 IFI27L1Q96BM0 104 aa6□□□□□ -1.45
DDX41-211ENST00000510171 TMEM126AQ9H061 195 aa6□□□□□ -1.45
DDX41-211ENST00000510171 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
DDX41-211ENST00000510171 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
DDX41-211ENST00000510171 SCO1O75880 301 aa5.99□□□□□ -1.45
DDX41-211ENST00000510171 HSBP1O75506 76 aa5.98□□□□□ -1.45
DDX41-211ENST00000510171 LINC00158P58513 81 aa5.98□□□□□ -1.45
DDX41-211ENST00000510171 FAM19A1Q7Z5A9 133 aa5.98□□□□□ -1.45
DDX41-211ENST00000510171 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
DDX41-211ENST00000510171 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
DDX41-211ENST00000510171 M0R378 163 aa5.97□□□□□ -1.45
DDX41-211ENST00000510171 ATP6V1G1O75348 118 aa5.97□□□□□ -1.45
DDX41-211ENST00000510171 PRLHP81277 87 aa5.97□□□□□ -1.45
DDX41-211ENST00000510171 HERV-K104P63124 156 aa5.96□□□□□ -1.46
DDX41-211ENST00000510171 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
DDX41-211ENST00000510171 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
DDX41-211ENST00000510171 LINC01547P58512 204 aaPredicted RBP5.95□□□□□ -1.46
DDX41-211ENST00000510171 MEIG1Q5JSS6 88 aa5.95□□□□□ -1.46
DDX41-211ENST00000510171 CBLN2Q8IUK8 224 aa5.95□□□□□ -1.46
DDX41-211ENST00000510171 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
DDX41-211ENST00000510171 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
DDX41-211ENST00000510171 Q8NDZ9 215 aa5.95□□□□□ -1.46
DDX41-211ENST00000510171 A0A0U1RRA0 63 aa5.94□□□□□ -1.46
DDX41-211ENST00000510171 SMIM13P0DJ93 91 aa5.94□□□□□ -1.46
DDX41-211ENST00000510171 C4orf48Q5BLP8 95 aa5.94□□□□□ -1.46
DDX41-211ENST00000510171 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
DDX41-211ENST00000510171 C3orf22Q8N5N4 141 aa5.94□□□□□ -1.46
DDX41-211ENST00000510171 MAP1LC3CQ9BXW4 147 aa5.94□□□□□ -1.46
DDX41-211ENST00000510171 MYMXA0A1B0GTQ4 84 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 LEPROTL1O95214 131 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 TRGC2P03986 189 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 PLNP26678 52 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 BOD1L2Q8IYS8 172 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 NDUFA12Q9UI09 145 aa5.93□□□□□ -1.46
DDX41-211ENST00000510171 H0Y8G0 127 aa5.92□□□□□ -1.46
DDX41-211ENST00000510171 PRYO14603 147 aa5.92□□□□□ -1.46
DDX41-211ENST00000510171 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
DDX41-211ENST00000510171 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
DDX41-211ENST00000510171 HIGD2AQ9BW72 106 aa5.92□□□□□ -1.46
DDX41-211ENST00000510171 HSPB8Q9UJY1 196 aa5.92□□□□□ -1.46
DDX41-211ENST00000510171 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
DDX41-211ENST00000510171 SERF1AO75920 110 aa5.91□□□□□ -1.46
DDX41-211ENST00000510171 S100A12P80511 92 aa5.91□□□□□ -1.46
DDX41-211ENST00000510171 KCNQ1DNQ9H478 68 aa5.91□□□□□ -1.46
DDX41-211ENST00000510171 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
DDX41-211ENST00000510171 NCR3O14931 201 aa5.9□□□□□ -1.46
DDX41-211ENST00000510171 LEPROTO15243 131 aa5.9□□□□□ -1.46
DDX41-211ENST00000510171 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.46
DDX41-211ENST00000510171 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 DPM2O94777 84 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 SPRR1AP35321 89 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 NMUP48645 174 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 LINC00310P59036 64 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
DDX41-211ENST00000510171 HERVK_113P61574 105 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 SPRR4Q96PI1 79 aa5.89□□□□□ -1.47
DDX41-211ENST00000510171 ETDCA0A1B0GVM5 59 aa5.88□□□□□ -1.47
DDX41-211ENST00000510171 J3QQQ9 107 aa5.88□□□□□ -1.47
DDX41-211ENST00000510171 TRBV10-3A0A0K0K1G6 114 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 TRBV10-2A0A0K0K1G8 114 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
DDX41-211ENST00000510171 SPINK1P00995 79 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 IGKCP01834 107 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 FABP4P15090 132 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 LGALS3P17931 250 aaKnown RBP5.87□□□□□ -1.47
DDX41-211ENST00000510171 TSPEAR-AS2P59090 65 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 DAND5Q8N907 189 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 Q8NBF4 154 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 MIEN1Q9BRT3 115 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
DDX41-211ENST00000510171 COLCA2A8K830 154 aa5.86□□□□□ -1.47
DDX41-211ENST00000510171 SPANXB1Q9NS25 103 aaPredicted RBP5.86□□□□□ -1.47
DDX41-211ENST00000510171 DDTP30046 118 aa5.85□□□□□ -1.47
DDX41-211ENST00000510171 SLC7A5P1Q8MH63 180 aa5.85□□□□□ -1.47
DDX41-211ENST00000510171 SMCR5Q8TEV8 140 aa5.85□□□□□ -1.47
DDX41-211ENST00000510171 NDUFC2O95298 119 aa5.84□□□□□ -1.47
DDX41-211ENST00000510171 PMCHL2Q9BQD1 86 aa5.84□□□□□ -1.47
DDX41-211ENST00000510171 B5MCH6 92 aa5.83□□□□□ -1.48
DDX41-211ENST00000510171 LINC00483Q53H64 154 aa5.83□□□□□ -1.48
DDX41-211ENST00000510171 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
DDX41-211ENST00000510171 E9PLD3 99 aa5.82□□□□□ -1.48
DDX41-211ENST00000510171 IGLV6-57P01721 117 aa5.82□□□□□ -1.48
DDX41-211ENST00000510171 Q6ZRX8 168 aa5.82□□□□□ -1.48
DDX41-211ENST00000510171 CBY1Q9Y3M2 126 aa5.82□□□□□ -1.48
DDX41-211ENST00000510171 A0A0J9YXY3 114 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms