RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 LINC01561Q8N1V8 128 aa2□□□□□ -2.09
RNF4-211ENST00000509206 SMCR5Q8TEV8 140 aa2□□□□□ -2.09
RNF4-211ENST00000509206 VCX2Q9H322 139 aa2□□□□□ -2.09
RNF4-211ENST00000509206 SPANXA1Q9NS26 97 aa2□□□□□ -2.09
RNF4-211ENST00000509206 KRTAP16-1A8MUX0 517 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 M0R378 163 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 PPP1R2P9O14990 202 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 PLA2G10O15496 165 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 MT1FP04733 61 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 IFI27P40305 119 aaPredicted RBP1.99□□□□□ -2.09
RNF4-211ENST00000509206 CXCL5P42830 114 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 RPL39P62891 51 aaKnown RBP1.99□□□□□ -2.09
RNF4-211ENST00000509206 MRPS36P82909 103 aaKnown RBP1.99□□□□□ -2.09
RNF4-211ENST00000509206 CENPWQ5EE01 88 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 Q8IZM0 81 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 KCNRGQ8N5I3 272 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 SFT2D1Q8WV19 159 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 C2orf88Q9BSF0 95 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 KRTAP2-2Q9BYT5 123 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 DHRS4-AS1Q9P1J3 65 aa1.99□□□□□ -2.09
RNF4-211ENST00000509206 FAM236DA0A1B0GTK5 79 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 SMKR1H3BMG3 65 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 FAM236CP0DP71 79 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 H2BFSP57053 126 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 RAB14P61106 215 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 HRCT1Q6UXD1 115 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 TEX43Q6ZNM6 134 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 FAM19A3Q7Z5A8 133 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 ENKURQ8TC29 256 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 TMEM191AQ9H0A3 160 aa1.98□□□□□ -2.09
RNF4-211ENST00000509206 ETDCA0A1B0GVM5 59 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 E9PLD3 99 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 RAB4AP20338 218 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 RAB5AP20339 215 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 PFN2P35080 140 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 S100A12P80511 92 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 RPL7L1Q6DKI1 246 aaKnown RBP1.97□□□□□ -2.09
RNF4-211ENST00000509206 SMIM12Q96EX1 92 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 TMEM141Q96I45 108 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 MED9Q9NWA0 146 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
RNF4-211ENST00000509206 FXYD6-FXYD2A0A087WZ82 144 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 PCP4L1A6NKN8 68 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 A8MWL6 223 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 GATCO43716 136 aaKnown RBP1.96□□□□□ -2.1
RNF4-211ENST00000509206 GIPP09681 153 aaPredicted RBP1.96□□□□□ -2.1
RNF4-211ENST00000509206 SEC11AP67812 179 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 CCL20P78556 96 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 LINC00483Q53H64 154 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 AMN1Q8IY45 258 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 FAM213BQ8TBF2 198 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 C20orf166-AS1Q96NR2 134 aa1.96□□□□□ -2.1
RNF4-211ENST00000509206 EIF5A2Q9GZV4 153 aaKnown RBP1.96□□□□□ -2.1
RNF4-211ENST00000509206 A0A1B0GUT8 65 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 ATP5LO75964 103 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 CKS2P33552 79 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 HERVK_113P63121 156 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 C6orf99Q4VX62 202 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 C2orf66Q6UXQ4 117 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 MTURNQ8N3F0 131 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 COX7B2Q8TF08 81 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 C20orf78Q9BR46 151 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 GNG13Q9P2W3 67 aa1.95□□□□□ -2.1
RNF4-211ENST00000509206 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 TRAV9-1A0A075B6T8 112 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 TEX46H3BTG2 121 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 CXCL6P80162 114 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 MBD3L1Q8WWY6 194 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 FAM104AQ969W3 186 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 MANBALQ9NQG1 85 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 CDKN2A-AS1Q9UH64 79 aa1.94□□□□□ -2.1
RNF4-211ENST00000509206 LOC389332A0A1B0GUA5 103 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 LINC00862A6NCI5 91 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 H0Y8G0 127 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 PDE6DO43924 150 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 Q1RN00 199 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 PDZD11Q5EBL8 140 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 C10orf91Q5T1B1 145 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 Q6ZVH6 145 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 SND1-IT1Q9HBX3 110 aa1.93□□□□□ -2.1
RNF4-211ENST00000509206 CHTOPQ9Y3Y2 248 aaKnown RBP1.93□□□□□ -2.1
RNF4-211ENST00000509206 HIGD1CA8MV81 97 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 H7C2G1 150 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 SEC61GP60059 68 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 MRPL51Q4U2R6 128 aaKnown RBP1.92□□□□□ -2.1
RNF4-211ENST00000509206 SLC25A34Q6PIV7 304 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 PCP2Q8IVA1 136 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 RBM12B-AS1Q9P1G2 102 aa1.92□□□□□ -2.1
RNF4-211ENST00000509206 TRBV24-1A0A075B6N3 115 aa1.91□□□□□ -2.1
RNF4-211ENST00000509206 A0A1B0GWB2 263 aa1.91□□□□□ -2.1
RNF4-211ENST00000509206 A6NN06 94 aa1.91□□□□□ -2.1
RNF4-211ENST00000509206 ERC2-IT1O76042 136 aa1.91□□□□□ -2.1
RNF4-211ENST00000509206 LINC00158P58513 81 aa1.91□□□□□ -2.1
RNF4-211ENST00000509206 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
RNF4-211ENST00000509206 JOSD1Q15040 202 aaPredicted RBP1.91□□□□□ -2.1
RNF4-211ENST00000509206 FAM104BQ5XKR9 115 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms