RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 KRTAP1-4P0C5Y4 121 aa14.65□□□□□ -0.06
PROM1-209ENST00000508940 MEIG1Q5JSS6 88 aa14.65□□□□□ -0.06
PROM1-209ENST00000508940 HMCN2Q8NDA2 5059 aa14.64□□□□□ -0.07
PROM1-209ENST00000508940 PLNP26678 52 aa14.64□□□□□ -0.07
PROM1-209ENST00000508940 UBE2AP49459 152 aa14.64□□□□□ -0.07
PROM1-209ENST00000508940 HERV-K104P63124 156 aa14.64□□□□□ -0.07
PROM1-209ENST00000508940 MYMXA0A1B0GTQ4 84 aa14.62□□□□□ -0.07
PROM1-209ENST00000508940 LINC00587B1AMM8 73 aa14.62□□□□□ -0.07
PROM1-209ENST00000508940 NDUFA12Q9UI09 145 aa14.62□□□□□ -0.07
PROM1-209ENST00000508940 SMIM13P0DJ93 91 aa14.61□□□□□ -0.07
PROM1-209ENST00000508940 RPL13AP40429 203 aaKnown RBP14.61□□□□□ -0.07
PROM1-209ENST00000508940 DPM2O94777 84 aa14.6□□□□□ -0.07
PROM1-209ENST00000508940 HERVK_113P61574 105 aa14.6□□□□□ -0.07
PROM1-209ENST00000508940 PLEKHB2Q96CS7 222 aa14.6□□□□□ -0.07
PROM1-209ENST00000508940 MAP1LC3CQ9BXW4 147 aa14.6□□□□□ -0.07
PROM1-209ENST00000508940 LEPROTO15243 131 aa14.58□□□□□ -0.08
PROM1-209ENST00000508940 PMCHL2Q9BQD1 86 aa14.58□□□□□ -0.08
PROM1-209ENST00000508940 IGKCP01834 107 aa14.57□□□□□ -0.08
PROM1-209ENST00000508940 MIR7-3HGQ8N6C7 128 aa14.56□□□□□ -0.08
PROM1-209ENST00000508940 Q8NDZ9 215 aa14.56□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BKO60814 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BJP06899 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BOP23527 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BBP33778 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BDP58876 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BCP62807 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST2H2BEQ16778 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.55□□□□□ -0.08
PROM1-209ENST00000508940 FAM19A1Q7Z5A9 133 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BHQ93079 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BNQ99877 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 HIST1H2BMQ99879 126 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 TMEM126AQ9H061 195 aa14.55□□□□□ -0.08
PROM1-209ENST00000508940 M0R378 163 aa14.54□□□□□ -0.08
PROM1-209ENST00000508940 BOD1L2Q8IYS8 172 aa14.54□□□□□ -0.08
PROM1-209ENST00000508940 TMEM238C9JI98 176 aa14.53□□□□□ -0.08
PROM1-209ENST00000508940 KRTAP13-1Q8IUC0 172 aa14.53□□□□□ -0.08
PROM1-209ENST00000508940 J3QQQ9 107 aa14.52□□□□□ -0.09
PROM1-209ENST00000508940 LGALS3P17931 250 aaKnown RBP14.52□□□□□ -0.09
PROM1-209ENST00000508940 TSPEAR-AS2P59090 65 aa14.52□□□□□ -0.09
PROM1-209ENST00000508940 NMUP48645 174 aa14.5□□□□□ -0.09
PROM1-209ENST00000508940 PRLHP81277 87 aa14.5□□□□□ -0.09
PROM1-209ENST00000508940 CRYGAP11844 174 aa14.49□□□□□ -0.09
PROM1-209ENST00000508940 NCR3O14931 201 aa14.47□□□□□ -0.09
PROM1-209ENST00000508940 SYS1-DBNDD2H3BUS1 97 aa14.46□□□□□ -0.09
PROM1-209ENST00000508940 IGKV2D-26A0A0A0MRZ7 120 aa14.45□□□□□ -0.1
PROM1-209ENST00000508940 DAND5Q8N907 189 aa14.44□□□□□ -0.1
PROM1-209ENST00000508940 TYMSOSQ8TAI1 123 aa14.44□□□□□ -0.1
PROM1-209ENST00000508940 ANAPC11Q9NYG5 84 aa14.44□□□□□ -0.1
PROM1-209ENST00000508940 A0A087X002 238 aa14.43□□□□□ -0.1
PROM1-209ENST00000508940 PRYO14603 147 aa14.42□□□□□ -0.1
PROM1-209ENST00000508940 MIEN1Q9BRT3 115 aa14.42□□□□□ -0.1
PROM1-209ENST00000508940 E9PLD3 99 aa14.41□□□□□ -0.1
PROM1-209ENST00000508940 PET117Q6UWS5 81 aa14.41□□□□□ -0.1
PROM1-209ENST00000508940 S100A12P80511 92 aa14.4□□□□□ -0.1
PROM1-209ENST00000508940 FAM229BQ4G0N7 80 aa14.4□□□□□ -0.1
PROM1-209ENST00000508940 HIGD2AQ9BW72 106 aa14.4□□□□□ -0.1
PROM1-209ENST00000508940 LOC107984156A0A0G2JMH3 177 aa14.39□□□□□ -0.11
PROM1-209ENST00000508940 LINC01545Q5VT33 79 aa14.39□□□□□ -0.11
PROM1-209ENST00000508940 ARL17AQ8IVW1 177 aa14.39□□□□□ -0.11
PROM1-209ENST00000508940 KCNQ1DNQ9H478 68 aa14.38□□□□□ -0.11
PROM1-209ENST00000508940 TRBV10-3A0A0K0K1G6 114 aa14.36□□□□□ -0.11
PROM1-209ENST00000508940 COA6Q5JTJ3 125 aaKnown RBP14.36□□□□□ -0.11
PROM1-209ENST00000508940 A0A0J9YXY3 114 aa14.35□□□□□ -0.11
PROM1-209ENST00000508940 ETDCA0A1B0GVM5 59 aa14.35□□□□□ -0.11
PROM1-209ENST00000508940 TSPAN13O95857 204 aa14.35□□□□□ -0.11
PROM1-209ENST00000508940 LINC00337Q8N6G1 96 aa14.35□□□□□ -0.11
PROM1-209ENST00000508940 TRBV10-2A0A0K0K1G8 114 aa14.34□□□□□ -0.11
PROM1-209ENST00000508940 C3orf79P0CE67 100 aa14.34□□□□□ -0.11
PROM1-209ENST00000508940 KRTDAPP60985 99 aa14.33□□□□□ -0.12
PROM1-209ENST00000508940 KRTAP13-2Q52LG2 175 aa14.33□□□□□ -0.12
PROM1-209ENST00000508940 SPANXB1Q9NS25 103 aaPredicted RBP14.33□□□□□ -0.12
PROM1-209ENST00000508940 DDTP30046 118 aa14.32□□□□□ -0.12
PROM1-209ENST00000508940 SPRR1AP35321 89 aa14.32□□□□□ -0.12
PROM1-209ENST00000508940 NDUFC2O95298 119 aa14.31□□□□□ -0.12
PROM1-209ENST00000508940 NPC2P61916 151 aa14.31□□□□□ -0.12
PROM1-209ENST00000508940 PRR4Q16378 134 aa14.31□□□□□ -0.12
PROM1-209ENST00000508940 S100A7L2Q5SY68 101 aa14.31□□□□□ -0.12
PROM1-209ENST00000508940 ZNF706Q9Y5V0 76 aaPredicted RBP14.3□□□□□ -0.12
PROM1-209ENST00000508940 UBR4Q5T4S7 5183 aa14.3□□□□□ -0.12
PROM1-209ENST00000508940 ADAMTSL4-AS1Q5T5F5 129 aa14.29□□□□□ -0.12
PROM1-209ENST00000508940 C20orf202A1L168 122 aa14.28□□□□□ -0.12
PROM1-209ENST00000508940 SMCR5Q8TEV8 140 aa14.27□□□□□ -0.13
PROM1-209ENST00000508940 SPRR4Q96PI1 79 aa14.27□□□□□ -0.13
PROM1-209ENST00000508940 ZNF815PA8K554 130 aa14.26□□□□□ -0.13
PROM1-209ENST00000508940 KRTAP4-16G5E9R7 235 aaPredicted RBP14.26□□□□□ -0.13
PROM1-209ENST00000508940 SOSTDC1Q6X4U4 206 aa14.26□□□□□ -0.13
PROM1-209ENST00000508940 LINC00304Q8N9R0 145 aa14.26□□□□□ -0.13
PROM1-209ENST00000508940 LRP2P98164 4655 aa14.25□□□□□ -0.13
PROM1-209ENST00000508940 TIMM17BO60830 172 aa14.24□□□□□ -0.13
PROM1-209ENST00000508940 S100A1P23297 94 aa14.23□□□□□ -0.13
PROM1-209ENST00000508940 B5MCH6 92 aa14.22□□□□□ -0.13
PROM1-209ENST00000508940 EIF4EBP3O60516 100 aaPredicted RBP14.22□□□□□ -0.13
PROM1-209ENST00000508940 IGLV6-57P01721 117 aa14.22□□□□□ -0.13
PROM1-209ENST00000508940 C3orf22Q8N5N4 141 aa14.21□□□□□ -0.13
PROM1-209ENST00000508940 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.13
PROM1-209ENST00000508940 LITAFQ99732 161 aa14.2□□□□□ -0.14
PROM1-209ENST00000508940 CBY1Q9Y3M2 126 aa14.2□□□□□ -0.14
PROM1-209ENST00000508940 TRAV23DV6A0A075B6W5 121 aa14.19□□□□□ -0.14
PROM1-209ENST00000508940 AKR1D1P51857 326 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms