RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
HTT-204ENST00000508321 ARL17AQ8IVW1 177 aa6.46□□□□□ -1.38
HTT-204ENST00000508321 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
HTT-204ENST00000508321 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
HTT-204ENST00000508321 DLEU1O43261 78 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 SMIM6P0DI80 62 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 COX8AP10176 69 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 LBHQ53QV2 105 aaPredicted RBP6.45□□□□□ -1.38
HTT-204ENST00000508321 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 LITAFQ99732 161 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 TTTY13Q9BZ97 58 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
HTT-204ENST00000508321 A0A0U1RRA0 63 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 S100A12P80511 92 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 HAMPP81172 84 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
HTT-204ENST00000508321 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
HTT-204ENST00000508321 VPREB1P12018 145 aa6.43□□□□□ -1.38
HTT-204ENST00000508321 IFITM1P13164 125 aa6.43□□□□□ -1.38
HTT-204ENST00000508321 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
HTT-204ENST00000508321 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
HTT-204ENST00000508321 Q8N1X5 172 aa6.43□□□□□ -1.38
HTT-204ENST00000508321 SPANXB1Q9NS25 103 aaPredicted RBP6.43□□□□□ -1.38
HTT-204ENST00000508321 NDUFC2O95298 119 aa6.42□□□□□ -1.38
HTT-204ENST00000508321 PLA2G1BP04054 148 aaKnown RBP6.42□□□□□ -1.38
HTT-204ENST00000508321 DAND5Q8N907 189 aa6.42□□□□□ -1.38
HTT-204ENST00000508321 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
HTT-204ENST00000508321 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
HTT-204ENST00000508321 TRBV10-2A0A0K0K1G8 114 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 Q5VSD8 79 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 SLC25A34Q6PIV7 304 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 LINC00308Q8TCZ7 52 aa6.41□□□□□ -1.38
HTT-204ENST00000508321 RPL37AP61513 92 aaKnown RBP6.4□□□□□ -1.38
HTT-204ENST00000508321 UBE2BP63146 152 aa6.4□□□□□ -1.38
HTT-204ENST00000508321 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.38
HTT-204ENST00000508321 HIGD1BQ9P298 99 aa6.4□□□□□ -1.38
HTT-204ENST00000508321 HSPG2P98160 4391 aa6.39□□□□□ -1.39
HTT-204ENST00000508321 M0R378 163 aa6.39□□□□□ -1.39
HTT-204ENST00000508321 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
HTT-204ENST00000508321 PRR3P79522 188 aaKnown RBP6.39□□□□□ -1.39
HTT-204ENST00000508321 CBY1Q9Y3M2 126 aa6.39□□□□□ -1.39
HTT-204ENST00000508321 LOC105371267A0A1B0GV96 52 aa6.38□□□□□ -1.39
HTT-204ENST00000508321 SRSF9Q13242 221 aaKnown RBP eCLIP6.38□□□□□ -1.39
HTT-204ENST00000508321 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
HTT-204ENST00000508321 C14orf144Q96I85 54 aa6.38□□□□□ -1.39
HTT-204ENST00000508321 NCR3O14931 201 aa6.37□□□□□ -1.39
HTT-204ENST00000508321 LINC00518Q8N0U6 118 aa6.37□□□□□ -1.39
HTT-204ENST00000508321 Q8NDZ9 215 aa6.37□□□□□ -1.39
HTT-204ENST00000508321 LINC00167Q96N53 147 aa6.37□□□□□ -1.39
HTT-204ENST00000508321 UQCR10Q9UDW1 63 aa6.37□□□□□ -1.39
HTT-204ENST00000508321 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
HTT-204ENST00000508321 PRYO14603 147 aa6.36□□□□□ -1.39
HTT-204ENST00000508321 NPC2P61916 151 aa6.36□□□□□ -1.39
HTT-204ENST00000508321 TAL2Q16559 108 aa6.36□□□□□ -1.39
HTT-204ENST00000508321 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
HTT-204ENST00000508321 HIST1H4GQ99525 98 aa6.35□□□□□ -1.39
HTT-204ENST00000508321 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
HTT-204ENST00000508321 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
HTT-204ENST00000508321 DDTP30046 118 aa6.34□□□□□ -1.39
HTT-204ENST00000508321 KRTAP10-4P60372 401 aaPredicted RBP6.34□□□□□ -1.39
HTT-204ENST00000508321 S100A7L2Q5SY68 101 aa6.34□□□□□ -1.39
HTT-204ENST00000508321 C2orf91Q6ZV80 131 aa6.34□□□□□ -1.39
HTT-204ENST00000508321 MUSTN1Q8IVN3 82 aa6.34□□□□□ -1.39
HTT-204ENST00000508321 IGKV2-28A0A075B6P5 120 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 RPL37AP8A6NKH3 93 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 BCE1O60756 84 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 IGKV2D-28P01615 120 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 TMEM126AQ9H061 195 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
HTT-204ENST00000508321 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
HTT-204ENST00000508321 TRBV10-3A0A0K0K1G6 114 aa6.32□□□□□ -1.4
HTT-204ENST00000508321 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
HTT-204ENST00000508321 A6NJY4 79 aa6.32□□□□□ -1.4
HTT-204ENST00000508321 HSD52Q0P140 79 aa6.32□□□□□ -1.4
HTT-204ENST00000508321 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 TSTD3H0UI37 97 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
HTT-204ENST00000508321 KRTAP11-1Q8IUC1 163 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 C12orf57Q99622 126 aa6.31□□□□□ -1.4
HTT-204ENST00000508321 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
HTT-204ENST00000508321 A4D1N5 150 aa6.3□□□□□ -1.4
HTT-204ENST00000508321 SPRR1AP35321 89 aa6.3□□□□□ -1.4
HTT-204ENST00000508321 RPL28P46779 137 aaKnown RBP6.3□□□□□ -1.4
HTT-204ENST00000508321 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
HTT-204ENST00000508321 CEND1Q8N111 149 aa6.3□□□□□ -1.4
HTT-204ENST00000508321 H0Y9J4 135 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms