RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 Q8N814 137 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 TRBV7-7A0A0K0K1E9 115 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 CXCL6P80162 114 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 NTM-AS1Q6ZSK4 140 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
PDE6A-202ENST00000508173 PIEZO2Q9H5I5 2752 aa5.62□□□□□ -1.51
PDE6A-202ENST00000508173 USP9XQ93008 2570 aaPredicted RBP5.62□□□□□ -1.51
PDE6A-202ENST00000508173 A8MTW9 85 aa5.62□□□□□ -1.51
PDE6A-202ENST00000508173 WNK1Q9H4A3 2382 aa5.62□□□□□ -1.51
PDE6A-202ENST00000508173 Q6ZRU5 148 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 LINC01561Q8N1V8 128 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 LINC01546A6NGU7 62 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 Q8NBF4 154 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 H0Y9P7 68 aa5.61□□□□□ -1.51
PDE6A-202ENST00000508173 IGLV4-60A0A075B6I1 120 aa5.6□□□□□ -1.51
PDE6A-202ENST00000508173 H3BNG1 76 aa5.6□□□□□ -1.51
PDE6A-202ENST00000508173 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
PDE6A-202ENST00000508173 Q8N3U1 123 aa5.6□□□□□ -1.51
PDE6A-202ENST00000508173 AMELXQ99217 191 aa5.59□□□□□ -1.51
PDE6A-202ENST00000508173 LINC00313P59037 77 aa5.59□□□□□ -1.51
PDE6A-202ENST00000508173 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
PDE6A-202ENST00000508173 PRR14LQ5THK1 2151 aa5.59□□□□□ -1.52
PDE6A-202ENST00000508173 TET2Q6N021 2002 aaPredicted RBP5.59□□□□□ -1.52
PDE6A-202ENST00000508173 Q96NJ1 140 aa5.58□□□□□ -1.52
PDE6A-202ENST00000508173 Q9UF83 564 aa5.58□□□□□ -1.52
PDE6A-202ENST00000508173 BEAN1Q3B7T3 259 aa5.58□□□□□ -1.52
PDE6A-202ENST00000508173 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 ARHGAP32A7KAX9 2087 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 DEFB116Q30KQ4 102 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 COX8CQ7Z4L0 72 aa5.57□□□□□ -1.52
PDE6A-202ENST00000508173 EPM2AB3EWF7 344 aa5.56□□□□□ -1.52
PDE6A-202ENST00000508173 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
PDE6A-202ENST00000508173 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
PDE6A-202ENST00000508173 FAM19A4Q96LR4 140 aa5.55□□□□□ -1.52
PDE6A-202ENST00000508173 BPTFQ12830 3046 aa5.55□□□□□ -1.52
PDE6A-202ENST00000508173 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
PDE6A-202ENST00000508173 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
PDE6A-202ENST00000508173 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
PDE6A-202ENST00000508173 EXPH5Q8NEV8 1989 aa5.54□□□□□ -1.52
PDE6A-202ENST00000508173 HECTD1Q9ULT8 2610 aa5.53□□□□□ -1.52
PDE6A-202ENST00000508173 M0R2T5 61 aa5.53□□□□□ -1.52
PDE6A-202ENST00000508173 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
PDE6A-202ENST00000508173 A0A1B0GU69 56 aa5.53□□□□□ -1.52
PDE6A-202ENST00000508173 FN1P02751 2386 aaKnown RBP5.52□□□□□ -1.53
PDE6A-202ENST00000508173 C1orf64Q8NEQ6 169 aa5.52□□□□□ -1.53
PDE6A-202ENST00000508173 BCE1O60756 84 aa5.51□□□□□ -1.53
PDE6A-202ENST00000508173 C8orf87E5RJ46 101 aa5.51□□□□□ -1.53
PDE6A-202ENST00000508173 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
PDE6A-202ENST00000508173 LINC00588Q9Y4M8 146 aa5.51□□□□□ -1.53
PDE6A-202ENST00000508173 K7EIL1 84 aa5.5□□□□□ -1.53
PDE6A-202ENST00000508173 SMR3BP02814 79 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-202ENST00000508173 USP34Q70CQ2 3546 aa5.5□□□□□ -1.53
PDE6A-202ENST00000508173 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
PDE6A-202ENST00000508173 BAHCC1Q9P281 2608 aa5.49□□□□□ -1.53
PDE6A-202ENST00000508173 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
PDE6A-202ENST00000508173 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
PDE6A-202ENST00000508173 TLN2Q9Y4G6 2542 aa5.48□□□□□ -1.53
PDE6A-202ENST00000508173 HELZ2Q9BYK8 2649 aaKnown RBP5.47□□□□□ -1.53
PDE6A-202ENST00000508173 TM2D3Q9BRN9 247 aa5.47□□□□□ -1.53
PDE6A-202ENST00000508173 LITAFQ99732 161 aa5.46□□□□□ -1.54
PDE6A-202ENST00000508173 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
PDE6A-202ENST00000508173 IGLV5-39A0A0G2JS06 123 aa5.45□□□□□ -1.54
PDE6A-202ENST00000508173 ANKRD17O75179 2603 aaKnown RBP5.45□□□□□ -1.54
PDE6A-202ENST00000508173 AGRNO00468 2067 aa5.45□□□□□ -1.54
PDE6A-202ENST00000508173 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
PDE6A-202ENST00000508173 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
PDE6A-202ENST00000508173 UTRNP46939 3433 aa5.44□□□□□ -1.54
PDE6A-202ENST00000508173 EIF4EBP3O60516 100 aaPredicted RBP5.44□□□□□ -1.54
PDE6A-202ENST00000508173 A0A1B0GW54 56 aa5.43□□□□□ -1.54
PDE6A-202ENST00000508173 DNAH10OSP0CZ25 163 aa5.43□□□□□ -1.54
PDE6A-202ENST00000508173 Q6ZQT0 140 aa5.43□□□□□ -1.54
PDE6A-202ENST00000508173 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
PDE6A-202ENST00000508173 Q6ZSA8 131 aa5.42□□□□□ -1.54
PDE6A-202ENST00000508173 Q8NAQ8 132 aa5.42□□□□□ -1.54
PDE6A-202ENST00000508173 DNAH12Q6ZR08 3092 aa5.42□□□□□ -1.54
PDE6A-202ENST00000508173 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
PDE6A-202ENST00000508173 Q6ZRX8 168 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 APLNQ9ULZ1 77 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 C9orf163Q8N9P6 203 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 USP9YO00507 2555 aaPredicted RBP5.41□□□□□ -1.54
PDE6A-202ENST00000508173 SSBP3-AS1Q7Z2R9 100 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 LINC00476Q8WZB0 136 aa5.41□□□□□ -1.54
PDE6A-202ENST00000508173 A0A087WTM6 91 aa5.4□□□□□ -1.54
PDE6A-202ENST00000508173 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
PDE6A-202ENST00000508173 CASC10Q5T4H9 136 aa5.4□□□□□ -1.54
PDE6A-202ENST00000508173 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.55
PDE6A-202ENST00000508173 H3BPC8 53 aa5.39□□□□□ -1.55
PDE6A-202ENST00000508173 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
PDE6A-202ENST00000508173 PCSK5Q92824 1860 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 IGLV5-45A0A087WSX0 123 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 PCNTO95613 3336 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 ACANP16112 2415 aa5.38□□□□□ -1.55
PDE6A-202ENST00000508173 ZNF861PO60384 105 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms