RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 INAFM2P0DMQ5 153 aa9.8□□□□□ -0.84
DDX41-208ENST00000507955 KPRPQ5T749 579 aaPredicted RBP9.8□□□□□ -0.84
DDX41-208ENST00000507955 IMUPQ9GZP8 106 aa9.8□□□□□ -0.84
DDX41-208ENST00000507955 NANOS2P60321 138 aaKnown RBP9.79□□□□□ -0.84
DDX41-208ENST00000507955 A0A0J9YWU9 116 aa9.79□□□□□ -0.84
DDX41-208ENST00000507955 H0YGX0 51 aa9.78□□□□□ -0.84
DDX41-208ENST00000507955 SPAG11BQ08648 103 aa9.78□□□□□ -0.84
DDX41-208ENST00000507955 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
DDX41-208ENST00000507955 MGAM2Q2M2H8 2515 aa9.78□□□□□ -0.84
DDX41-208ENST00000507955 NCR3O14931 201 aa9.77□□□□□ -0.85
DDX41-208ENST00000507955 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
DDX41-208ENST00000507955 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
DDX41-208ENST00000507955 EGFEM1PQ0D2K5 195 aa9.75□□□□□ -0.85
DDX41-208ENST00000507955 ESRGQ1W209 222 aa9.75□□□□□ -0.85
DDX41-208ENST00000507955 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
DDX41-208ENST00000507955 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
DDX41-208ENST00000507955 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
DDX41-208ENST00000507955 KLK5Q9Y337 293 aaPredicted RBP9.74□□□□□ -0.85
DDX41-208ENST00000507955 LYSTQ99698 3801 aa9.72□□□□□ -0.85
DDX41-208ENST00000507955 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
DDX41-208ENST00000507955 CXCL5P42830 114 aa9.71□□□□□ -0.85
DDX41-208ENST00000507955 MRAPQ8TCY5 172 aa9.71□□□□□ -0.85
DDX41-208ENST00000507955 COX17Q14061 63 aa9.71□□□□□ -0.86
DDX41-208ENST00000507955 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
DDX41-208ENST00000507955 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
DDX41-208ENST00000507955 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
DDX41-208ENST00000507955 C11orf45Q8TAV5 145 aa9.69□□□□□ -0.86
DDX41-208ENST00000507955 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
DDX41-208ENST00000507955 HIST1H4AP62805 103 aaKnown RBP9.69□□□□□ -0.86
DDX41-208ENST00000507955 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
DDX41-208ENST00000507955 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
DDX41-208ENST00000507955 COL7A1Q02388 2944 aa9.69□□□□□ -0.86
DDX41-208ENST00000507955 RPL18AQ02543 176 aaKnown RBP9.68□□□□□ -0.86
DDX41-208ENST00000507955 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
DDX41-208ENST00000507955 C3orf22Q8N5N4 141 aa9.68□□□□□ -0.86
DDX41-208ENST00000507955 Q8N814 137 aa9.68□□□□□ -0.86
DDX41-208ENST00000507955 A0A087WVE0 104 aa9.67□□□□□ -0.86
DDX41-208ENST00000507955 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
DDX41-208ENST00000507955 S100A7L2Q5SY68 101 aa9.67□□□□□ -0.86
DDX41-208ENST00000507955 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
DDX41-208ENST00000507955 NDUFC2O95298 119 aa9.66□□□□□ -0.86
DDX41-208ENST00000507955 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
DDX41-208ENST00000507955 HUWE1Q7Z6Z7 4374 aaKnown RBP9.66□□□□□ -0.86
DDX41-208ENST00000507955 C9orf153Q5TBE3 101 aa9.66□□□□□ -0.86
DDX41-208ENST00000507955 Q6JHZ5 121 aa9.65□□□□□ -0.86
DDX41-208ENST00000507955 STAB2Q8WWQ8 2551 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 ZNF561-AS1K7EIQ3 104 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 UQCRQO14949 82 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 H3BNG1 76 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 CCKP06307 115 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
DDX41-208ENST00000507955 Q6ZRU5 148 aa9.63□□□□□ -0.87
DDX41-208ENST00000507955 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
DDX41-208ENST00000507955 TENM2Q9NT68 2774 aa9.62□□□□□ -0.87
DDX41-208ENST00000507955 COX7CP15954 63 aa9.62□□□□□ -0.87
DDX41-208ENST00000507955 CYSTM1Q9H1C7 97 aa9.62□□□□□ -0.87
DDX41-208ENST00000507955 TRBV10-3A0A0K0K1G6 114 aa9.61□□□□□ -0.87
DDX41-208ENST00000507955 A0A1B0GX51 115 aa9.61□□□□□ -0.87
DDX41-208ENST00000507955 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
DDX41-208ENST00000507955 ATOX1O00244 68 aa9.59□□□□□ -0.87
DDX41-208ENST00000507955 K7EIL1 84 aa9.59□□□□□ -0.87
DDX41-208ENST00000507955 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
DDX41-208ENST00000507955 LINC00575Q6W349 94 aa9.59□□□□□ -0.87
DDX41-208ENST00000507955 CSMD3Q7Z407 3707 aa9.58□□□□□ -0.88
DDX41-208ENST00000507955 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
DDX41-208ENST00000507955 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
DDX41-208ENST00000507955 IGLV6-57P01721 117 aa9.57□□□□□ -0.88
DDX41-208ENST00000507955 CASC10Q5T4H9 136 aa9.57□□□□□ -0.88
DDX41-208ENST00000507955 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
DDX41-208ENST00000507955 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
DDX41-208ENST00000507955 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
DDX41-208ENST00000507955 Q6ZRP5 223 aa9.56□□□□□ -0.88
DDX41-208ENST00000507955 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
DDX41-208ENST00000507955 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
DDX41-208ENST00000507955 M0R2N4 97 aa9.55□□□□□ -0.88
DDX41-208ENST00000507955 CRYGAP11844 174 aa9.55□□□□□ -0.88
DDX41-208ENST00000507955 FAM19A1Q7Z5A9 133 aa9.53□□□□□ -0.88
DDX41-208ENST00000507955 DNAH1Q9P2D7 4330 aa9.53□□□□□ -0.88
DDX41-208ENST00000507955 TRAV23DV6A0A075B6W5 121 aa9.52□□□□□ -0.88
DDX41-208ENST00000507955 VPREB1P12018 145 aa9.52□□□□□ -0.88
DDX41-208ENST00000507955 UPK3BQ9BT76 320 aa9.52□□□□□ -0.88
DDX41-208ENST00000507955 Q6ZQY7 126 aa9.52□□□□□ -0.89
DDX41-208ENST00000507955 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
DDX41-208ENST00000507955 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
DDX41-208ENST00000507955 Q6ZQT0 140 aa9.52□□□□□ -0.89
DDX41-208ENST00000507955 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
DDX41-208ENST00000507955 DNAH7Q8WXX0 4024 aa9.51□□□□□ -0.89
DDX41-208ENST00000507955 TRAV10A0A0B4J240 114 aa9.51□□□□□ -0.89
DDX41-208ENST00000507955 DNAH10OSP0CZ25 163 aa9.51□□□□□ -0.89
DDX41-208ENST00000507955 ZNF73O43830 326 aaPredicted RBP9.5□□□□□ -0.89
DDX41-208ENST00000507955 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
DDX41-208ENST00000507955 SYCNQ0VAF6 134 aa9.5□□□□□ -0.89
DDX41-208ENST00000507955 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
DDX41-208ENST00000507955 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
DDX41-208ENST00000507955 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
DDX41-208ENST00000507955 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
DDX41-208ENST00000507955 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
DDX41-208ENST00000507955 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
DDX41-208ENST00000507955 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms