RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 DYNC1H1Q14204 4646 aaKnown RBP9.01□□□□□ -0.97
RNF4-208ENST00000507247 Q6ZSA8 131 aa9.01□□□□□ -0.97
RNF4-208ENST00000507247 SPANXB1Q9NS25 103 aaPredicted RBP9.01□□□□□ -0.97
RNF4-208ENST00000507247 FAM168BA1KXE4 195 aa9□□□□□ -0.97
RNF4-208ENST00000507247 HIGD1BQ9P298 99 aa9□□□□□ -0.97
RNF4-208ENST00000507247 PKHD1P08F94 4074 aa9□□□□□ -0.97
RNF4-208ENST00000507247 KRTAP7-1Q8IUC3 87 aa8.99□□□□□ -0.97
RNF4-208ENST00000507247 Q8NDZ9 215 aa8.99□□□□□ -0.97
RNF4-208ENST00000507247 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
RNF4-208ENST00000507247 MIEN1Q9BRT3 115 aa8.99□□□□□ -0.97
RNF4-208ENST00000507247 LOC107984156A0A0G2JMH3 177 aa8.98□□□□□ -0.97
RNF4-208ENST00000507247 A0A1W2PNN7 141 aa8.98□□□□□ -0.97
RNF4-208ENST00000507247 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
RNF4-208ENST00000507247 ARL17AQ8IVW1 177 aa8.98□□□□□ -0.97
RNF4-208ENST00000507247 LINC00474Q9P2X8 69 aa8.98□□□□□ -0.97
RNF4-208ENST00000507247 A0A087WYN8 130 aa8.97□□□□□ -0.97
RNF4-208ENST00000507247 HAMPP81172 84 aa8.97□□□□□ -0.97
RNF4-208ENST00000507247 SRSF9Q13242 221 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNF4-208ENST00000507247 Q6ZVH6 145 aa8.96□□□□□ -0.98
RNF4-208ENST00000507247 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
RNF4-208ENST00000507247 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
RNF4-208ENST00000507247 TSTD3H0UI37 97 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 VPREB1P12018 145 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 IFITM1P13164 125 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 HNRNPA3P51991 378 aaKnown RBP8.95□□□□□ -0.98
RNF4-208ENST00000507247 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 DPH3Q96FX2 82 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 HIST1H4GQ99525 98 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
RNF4-208ENST00000507247 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
RNF4-208ENST00000507247 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
RNF4-208ENST00000507247 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
RNF4-208ENST00000507247 DNAH8Q96JB1 4490 aa8.93□□□□□ -0.98
RNF4-208ENST00000507247 PPDPFQ9H3Y8 114 aa8.93□□□□□ -0.98
RNF4-208ENST00000507247 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
RNF4-208ENST00000507247 XGP55808 180 aa8.92□□□□□ -0.98
RNF4-208ENST00000507247 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
RNF4-208ENST00000507247 TAL2Q16559 108 aa8.92□□□□□ -0.98
RNF4-208ENST00000507247 M0QXV9 152 aa8.91□□□□□ -0.98
RNF4-208ENST00000507247 NCR3O14931 201 aa8.91□□□□□ -0.98
RNF4-208ENST00000507247 NDUFC2O95298 119 aa8.91□□□□□ -0.98
RNF4-208ENST00000507247 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
RNF4-208ENST00000507247 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
RNF4-208ENST00000507247 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
RNF4-208ENST00000507247 HSD52Q0P140 79 aa8.9□□□□□ -0.98
RNF4-208ENST00000507247 PHF5AQ7RTV0 110 aaKnown RBP8.9□□□□□ -0.98
RNF4-208ENST00000507247 CEND1Q8N111 149 aa8.9□□□□□ -0.98
RNF4-208ENST00000507247 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
RNF4-208ENST00000507247 IGKV2-28A0A075B6P5 120 aa8.89□□□□□ -0.99
RNF4-208ENST00000507247 A4D1N5 150 aa8.89□□□□□ -0.99
RNF4-208ENST00000507247 IGKV2D-28P01615 120 aa8.89□□□□□ -0.99
RNF4-208ENST00000507247 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
RNF4-208ENST00000507247 FXYD2P54710 66 aa8.88□□□□□ -0.99
RNF4-208ENST00000507247 CTAG1AP78358 180 aa8.88□□□□□ -0.99
RNF4-208ENST00000507247 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
RNF4-208ENST00000507247 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
RNF4-208ENST00000507247 GAGE10A6NGK3 116 aa8.87□□□□□ -0.99
RNF4-208ENST00000507247 M0R378 163 aa8.87□□□□□ -0.99
RNF4-208ENST00000507247 DDTP30046 118 aa8.87□□□□□ -0.99
RNF4-208ENST00000507247 LINC00167Q96N53 147 aa8.87□□□□□ -0.99
RNF4-208ENST00000507247 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
RNF4-208ENST00000507247 KRTAP11-1Q8IUC1 163 aa8.86□□□□□ -0.99
RNF4-208ENST00000507247 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
RNF4-208ENST00000507247 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
RNF4-208ENST00000507247 RYR1P21817 5038 aa8.85□□□□□ -0.99
RNF4-208ENST00000507247 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
RNF4-208ENST00000507247 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
RNF4-208ENST00000507247 HSPG2P98160 4391 aa8.84□□□□□ -0.99
RNF4-208ENST00000507247 TRBV10-3A0A0K0K1G6 114 aa8.83□□□□□ -1
RNF4-208ENST00000507247 CFC1BP0CG36 223 aa8.83□□□□□ -1
RNF4-208ENST00000507247 CFC1P0CG37 223 aa8.83□□□□□ -1
RNF4-208ENST00000507247 HINT1P49773 126 aaPredicted RBP8.83□□□□□ -1
RNF4-208ENST00000507247 LBHQ53QV2 105 aaPredicted RBP8.83□□□□□ -1
RNF4-208ENST00000507247 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
RNF4-208ENST00000507247 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
RNF4-208ENST00000507247 UBE2BP63146 152 aa8.82□□□□□ -1
RNF4-208ENST00000507247 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
RNF4-208ENST00000507247 TMEM238LA0A1B0GVL6 79 aa8.81□□□□□ -1
RNF4-208ENST00000507247 A6NJY4 79 aa8.81□□□□□ -1
RNF4-208ENST00000507247 IGLV6-57P01721 117 aa8.81□□□□□ -1
RNF4-208ENST00000507247 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
RNF4-208ENST00000507247 S100A7L2Q5SY68 101 aa8.81□□□□□ -1
RNF4-208ENST00000507247 OR13C6PQ8NH95 151 aa8.81□□□□□ -1
RNF4-208ENST00000507247 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
RNF4-208ENST00000507247 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
RNF4-208ENST00000507247 NHP2Q9NX24 153 aaKnown RBP8.8□□□□□ -1
RNF4-208ENST00000507247 TRAV13-2A0A0B4J235 113 aa8.79□□□□□ -1
RNF4-208ENST00000507247 A0A0B4J2C4 111 aa8.79□□□□□ -1
RNF4-208ENST00000507247 A6NDN8 102 aa8.79□□□□□ -1
RNF4-208ENST00000507247 M0R143 59 aa8.79□□□□□ -1
RNF4-208ENST00000507247 K7ERJ3 54 aa8.78□□□□□ -1
RNF4-208ENST00000507247 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
RNF4-208ENST00000507247 TMEM126AQ9H061 195 aa8.78□□□□□ -1
RNF4-208ENST00000507247 A0A1B0GWB2 263 aa8.77□□□□□ -1.01
RNF4-208ENST00000507247 PRYO14603 147 aa8.77□□□□□ -1.01
RNF4-208ENST00000507247 RPL13AP40429 203 aaKnown RBP8.77□□□□□ -1.01
RNF4-208ENST00000507247 RAB37Q96AX2 223 aa8.77□□□□□ -1.01
RNF4-208ENST00000507247 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
RNF4-208ENST00000507247 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms