RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 IGLV4-3A0A075B6K6 122 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 A8MWL6 223 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 GATCO43716 136 aaKnown RBP3.69□□□□□ -1.82
VCAN-207ENST00000507162 LINC00483Q53H64 154 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 Q5BKY6 102 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 FAM19A3Q7Z5A8 133 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
VCAN-207ENST00000507162 FXYD6-FXYD2A0A087WZ82 144 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 A0A1B0GUT8 65 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 PFN2P35080 140 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 CXCL5P42830 114 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
VCAN-207ENST00000507162 C2orf88Q9BSF0 95 aa3.68□□□□□ -1.82
VCAN-207ENST00000507162 EIF5A2Q9GZV4 153 aaKnown RBP3.68□□□□□ -1.82
VCAN-207ENST00000507162 K7EN84 100 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 LIMD2Q9BT23 127 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 VCX2Q9H322 139 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 MANBALQ9NQG1 85 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 CDKN2A-AS1Q9UH64 79 aa3.67□□□□□ -1.82
VCAN-207ENST00000507162 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
VCAN-207ENST00000507162 RAB5AP20339 215 aa3.66□□□□□ -1.82
VCAN-207ENST00000507162 COX7B2Q8TF08 81 aa3.66□□□□□ -1.82
VCAN-207ENST00000507162 C20orf78Q9BR46 151 aa3.66□□□□□ -1.82
VCAN-207ENST00000507162 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
VCAN-207ENST00000507162 ETDCA0A1B0GVM5 59 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 CKS2P33552 79 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 MRPL51Q4U2R6 128 aaKnown RBP3.65□□□□□ -1.83
VCAN-207ENST00000507162 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
VCAN-207ENST00000507162 LOC389332A0A1B0GUA5 103 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 PDE6DO43924 150 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 ERC2-IT1O76042 136 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 HERVK_113P63121 156 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 RIGQ13278 110 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 Q8NDZ9 215 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
VCAN-207ENST00000507162 TRBV24-1A0A075B6N3 115 aa3.63□□□□□ -1.83
VCAN-207ENST00000507162 UMAD1C9J7I0 102 aa3.63□□□□□ -1.83
VCAN-207ENST00000507162 TAGLN2P37802 199 aaKnown RBP3.63□□□□□ -1.83
VCAN-207ENST00000507162 HERV-K104P63124 156 aa3.63□□□□□ -1.83
VCAN-207ENST00000507162 FAM104BQ5XKR9 115 aa3.63□□□□□ -1.83
VCAN-207ENST00000507162 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
VCAN-207ENST00000507162 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 IGLV5-39A0A0G2JS06 123 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 LINC00862A6NCI5 91 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 ATP5LO75964 103 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 SEC11AP67812 179 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 AMELXQ99217 191 aa3.62□□□□□ -1.83
VCAN-207ENST00000507162 SMIM1B2RUZ4 78 aa3.61□□□□□ -1.83
VCAN-207ENST00000507162 NPYP01303 97 aa3.61□□□□□ -1.83
VCAN-207ENST00000507162 PDZD11Q5EBL8 140 aa3.61□□□□□ -1.83
VCAN-207ENST00000507162 FAM236DA0A1B0GTK5 79 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 D6R8Y8 96 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 H7C2G1 150 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 ARPC5O15511 151 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 FAM236CP0DP71 79 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 ERASQ7Z444 233 aa3.6□□□□□ -1.83
VCAN-207ENST00000507162 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
VCAN-207ENST00000507162 IFITM3Q01628 133 aa3.59□□□□□ -1.83
VCAN-207ENST00000507162 ZNF625Q96I27 306 aaPredicted RBP3.59□□□□□ -1.83
VCAN-207ENST00000507162 TRAV9-1A0A075B6T8 112 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 H0Y8G0 127 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 TEX46H3BTG2 121 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 C1orf195Q5TG92 126 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 KCNQ1DNQ9H478 68 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 ERG28Q9UKR5 140 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 CYSLTR1Q9Y271 337 aa3.58□□□□□ -1.84
VCAN-207ENST00000507162 NCR3O14931 201 aa3.57□□□□□ -1.84
VCAN-207ENST00000507162 SPRR1AP35321 89 aa3.57□□□□□ -1.84
VCAN-207ENST00000507162 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
VCAN-207ENST00000507162 CEBPGP53567 150 aa3.56□□□□□ -1.84
VCAN-207ENST00000507162 Q9BRP9 147 aa3.56□□□□□ -1.84
VCAN-207ENST00000507162 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
VCAN-207ENST00000507162 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
VCAN-207ENST00000507162 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
VCAN-207ENST00000507162 LINC00158P58513 81 aa3.55□□□□□ -1.84
VCAN-207ENST00000507162 S100A12P80511 92 aa3.55□□□□□ -1.84
VCAN-207ENST00000507162 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
VCAN-207ENST00000507162 S100ZQ8WXG8 99 aa3.55□□□□□ -1.84
VCAN-207ENST00000507162 TINCRA0A1B0GVN0 87 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 HMSDA8MTL9 139 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 COX17Q14061 63 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 TMEM136Q6ZRR5 245 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 BATF3Q9NR55 127 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 NAT8BQ9UHF3 227 aa3.54□□□□□ -1.84
VCAN-207ENST00000507162 TRBV10-3A0A0K0K1G6 114 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 F8W036 122 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 PPBPP02775 128 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 C10orf91Q5T1B1 145 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 SMIM29Q86T20 159 aa3.53□□□□□ -1.84
VCAN-207ENST00000507162 BOD1L2Q8IYS8 172 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms