RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
TCOF1-209ENST00000506630 DPM2O94777 84 aa8.06□□□□□ -1.12
TCOF1-209ENST00000506630 IGKCP01834 107 aa8.06□□□□□ -1.12
TCOF1-209ENST00000506630 COX17Q14061 63 aa8.06□□□□□ -1.12
TCOF1-209ENST00000506630 SPINK6Q6UWN8 80 aa8.06□□□□□ -1.12
TCOF1-209ENST00000506630 LBHQ53QV2 105 aaPredicted RBP8.05□□□□□ -1.12
TCOF1-209ENST00000506630 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 LINC00158P58513 81 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 HERVK_113P61574 105 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
TCOF1-209ENST00000506630 NKAPP1Q8N9T2 125 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 TP73-AS1Q9UF72 201 aa8.04□□□□□ -1.12
TCOF1-209ENST00000506630 LEPROTO15243 131 aa8.03□□□□□ -1.12
TCOF1-209ENST00000506630 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
TCOF1-209ENST00000506630 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
TCOF1-209ENST00000506630 SRSF9Q13242 221 aaKnown RBP eCLIP8.03□□□□□ -1.12
TCOF1-209ENST00000506630 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
TCOF1-209ENST00000506630 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
TCOF1-209ENST00000506630 MYMXA0A1B0GTQ4 84 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 GAGE10A6NGK3 116 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 HERV-K104P63124 156 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 COA6Q5JTJ3 125 aaKnown RBP8.02□□□□□ -1.13
TCOF1-209ENST00000506630 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
TCOF1-209ENST00000506630 IGLV5-37A0A075B6J1 123 aa8.01□□□□□ -1.13
TCOF1-209ENST00000506630 SMIM13P0DJ93 91 aa8.01□□□□□ -1.13
TCOF1-209ENST00000506630 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
TCOF1-209ENST00000506630 LINC00167Q96N53 147 aa8.01□□□□□ -1.13
TCOF1-209ENST00000506630 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
TCOF1-209ENST00000506630 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
TCOF1-209ENST00000506630 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
TCOF1-209ENST00000506630 J3QQQ9 107 aa7.99□□□□□ -1.13
TCOF1-209ENST00000506630 VPREB1P12018 145 aa7.99□□□□□ -1.13
TCOF1-209ENST00000506630 LGALS3P17931 250 aaKnown RBP7.99□□□□□ -1.13
TCOF1-209ENST00000506630 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
TCOF1-209ENST00000506630 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
TCOF1-209ENST00000506630 LINC00587B1AMM8 73 aa7.98□□□□□ -1.13
TCOF1-209ENST00000506630 C3orf79P0CE67 100 aa7.98□□□□□ -1.13
TCOF1-209ENST00000506630 KRTDAPP60985 99 aa7.98□□□□□ -1.13
TCOF1-209ENST00000506630 MIR7-3HGQ8N6C7 128 aa7.98□□□□□ -1.13
TCOF1-209ENST00000506630 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
TCOF1-209ENST00000506630 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
TCOF1-209ENST00000506630 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
TCOF1-209ENST00000506630 NMUP48645 174 aa7.97□□□□□ -1.13
TCOF1-209ENST00000506630 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
TCOF1-209ENST00000506630 LRP2P98164 4655 aa7.96□□□□□ -1.14
TCOF1-209ENST00000506630 E9PLD3 99 aa7.96□□□□□ -1.14
TCOF1-209ENST00000506630 H0Y9J4 135 aa7.96□□□□□ -1.14
TCOF1-209ENST00000506630 Q8NDZ9 215 aa7.96□□□□□ -1.14
TCOF1-209ENST00000506630 BCE1O60756 84 aa7.95□□□□□ -1.14
TCOF1-209ENST00000506630 C20orf202A1L168 122 aa7.94□□□□□ -1.14
TCOF1-209ENST00000506630 ZNF861PO60384 105 aa7.94□□□□□ -1.14
TCOF1-209ENST00000506630 BOD1L2Q8IYS8 172 aa7.94□□□□□ -1.14
TCOF1-209ENST00000506630 DAND5Q8N907 189 aa7.94□□□□□ -1.14
TCOF1-209ENST00000506630 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
TCOF1-209ENST00000506630 NCR3O14931 201 aa7.92□□□□□ -1.14
TCOF1-209ENST00000506630 S100A6P06703 90 aa7.92□□□□□ -1.14
TCOF1-209ENST00000506630 S100A2P29034 98 aa7.92□□□□□ -1.14
TCOF1-209ENST00000506630 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
TCOF1-209ENST00000506630 UBE2AP49459 152 aa7.92□□□□□ -1.14
TCOF1-209ENST00000506630 MIEN1Q9BRT3 115 aa7.91□□□□□ -1.14
TCOF1-209ENST00000506630 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
TCOF1-209ENST00000506630 TMEM238C9JI98 176 aa7.9□□□□□ -1.14
TCOF1-209ENST00000506630 M0R378 163 aa7.9□□□□□ -1.14
TCOF1-209ENST00000506630 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
TCOF1-209ENST00000506630 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
TCOF1-209ENST00000506630 IGKV2D-26A0A0A0MRZ7 120 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 NPC2P61916 151 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
TCOF1-209ENST00000506630 PRLHP81277 87 aa7.88□□□□□ -1.15
TCOF1-209ENST00000506630 HIST1H2BLQ99880 126 aa7.88□□□□□ -1.15
TCOF1-209ENST00000506630 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
TCOF1-209ENST00000506630 AKR1D1P51857 326 aa7.87□□□□□ -1.15
TCOF1-209ENST00000506630 PRR26Q8N8Z3 221 aa7.87□□□□□ -1.15
TCOF1-209ENST00000506630 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
TCOF1-209ENST00000506630 LOC107984156A0A0G2JMH3 177 aa7.86□□□□□ -1.15
TCOF1-209ENST00000506630 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
TCOF1-209ENST00000506630 KRTAP13-1Q8IUC0 172 aa7.86□□□□□ -1.15
TCOF1-209ENST00000506630 ARL17AQ8IVW1 177 aa7.86□□□□□ -1.15
TCOF1-209ENST00000506630 PRYO14603 147 aa7.85□□□□□ -1.15
TCOF1-209ENST00000506630 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
TCOF1-209ENST00000506630 SOSTDC1Q6X4U4 206 aa7.85□□□□□ -1.15
TCOF1-209ENST00000506630 SPANXB1Q9NS25 103 aaPredicted RBP7.85□□□□□ -1.15
TCOF1-209ENST00000506630 LPAP08519 4548 aa7.84□□□□□ -1.15
TCOF1-209ENST00000506630 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
TCOF1-209ENST00000506630 SNRPEP62304 92 aaKnown RBP7.84□□□□□ -1.15
TCOF1-209ENST00000506630 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 TIMM17BO60830 172 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 NDUFC2O95298 119 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 DDTP30046 118 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 S100A12P80511 92 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 LITAFQ99732 161 aa7.83□□□□□ -1.16
TCOF1-209ENST00000506630 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
TCOF1-209ENST00000506630 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms