RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
SCLT1-208ENST00000506368 NF1P21359 2839 aa10.98□□□□□ -0.65
SCLT1-208ENST00000506368 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
SCLT1-208ENST00000506368 FSHBP01225 129 aa10.98□□□□□ -0.65
SCLT1-208ENST00000506368 SORL1Q92673 2214 aa10.98□□□□□ -0.65
SCLT1-208ENST00000506368 Q6ZVQ6 151 aa10.97□□□□□ -0.65
SCLT1-208ENST00000506368 C18orf65Q6ZTR6 163 aa10.97□□□□□ -0.65
SCLT1-208ENST00000506368 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
SCLT1-208ENST00000506368 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.65
SCLT1-208ENST00000506368 C6orf99Q4VX62 202 aa10.96□□□□□ -0.65
SCLT1-208ENST00000506368 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.66
SCLT1-208ENST00000506368 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.66
SCLT1-208ENST00000506368 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
SCLT1-208ENST00000506368 F8WEM9 126 aa10.94□□□□□ -0.66
SCLT1-208ENST00000506368 HAMPP81172 84 aa10.94□□□□□ -0.66
SCLT1-208ENST00000506368 JMJD1CQ15652 2540 aa10.93□□□□□ -0.66
SCLT1-208ENST00000506368 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
SCLT1-208ENST00000506368 FP248Q71RG6 208 aaPredicted RBP10.92□□□□□ -0.66
SCLT1-208ENST00000506368 RMI2Q96E14 147 aa10.91□□□□□ -0.66
SCLT1-208ENST00000506368 C11orf68Q9H3H3 251 aaKnown RBP10.91□□□□□ -0.66
SCLT1-208ENST00000506368 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
SCLT1-208ENST00000506368 KIAA0087Q14695 138 aa10.91□□□□□ -0.66
SCLT1-208ENST00000506368 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
SCLT1-208ENST00000506368 CD164L2Q6UWJ8 174 aa10.91□□□□□ -0.66
SCLT1-208ENST00000506368 TRAV10A0A0B4J240 114 aa10.9□□□□□ -0.66
SCLT1-208ENST00000506368 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
SCLT1-208ENST00000506368 MIFP14174 115 aa10.9□□□□□ -0.66
SCLT1-208ENST00000506368 Q8N3U1 123 aa10.9□□□□□ -0.66
SCLT1-208ENST00000506368 C1orf43Q9BWL3 253 aa10.89□□□□□ -0.67
SCLT1-208ENST00000506368 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
SCLT1-208ENST00000506368 ESM1Q9NQ30 184 aa10.88□□□□□ -0.67
SCLT1-208ENST00000506368 GIG44P09565 113 aaPredicted RBP10.88□□□□□ -0.67
SCLT1-208ENST00000506368 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
SCLT1-208ENST00000506368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
SCLT1-208ENST00000506368 CCL24O00175 119 aa10.87□□□□□ -0.67
SCLT1-208ENST00000506368 F8WDY8 70 aa10.86□□□□□ -0.67
SCLT1-208ENST00000506368 IGLV6-57P01721 117 aa10.86□□□□□ -0.67
SCLT1-208ENST00000506368 NREPQ16612 68 aa10.85□□□□□ -0.67
SCLT1-208ENST00000506368 CSNK1G2-AS1Q8NCQ2 148 aa10.85□□□□□ -0.67
SCLT1-208ENST00000506368 FBN1P35555 2871 aaKnown RBP10.85□□□□□ -0.67
SCLT1-208ENST00000506368 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
SCLT1-208ENST00000506368 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
SCLT1-208ENST00000506368 SPATA3Q8NHX4 192 aa10.84□□□□□ -0.67
SCLT1-208ENST00000506368 TMEM254Q8TBM7 123 aa10.84□□□□□ -0.67
SCLT1-208ENST00000506368 Q6ZQY7 126 aa10.83□□□□□ -0.68
SCLT1-208ENST00000506368 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
SCLT1-208ENST00000506368 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
SCLT1-208ENST00000506368 A0A0J9YWU9 116 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 M0R2N4 97 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 IGHV4-30-4P0DP06 118 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 BPY2O14599 106 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 GYPEP15421 78 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
SCLT1-208ENST00000506368 ATRQ13535 2644 aa10.8□□□□□ -0.68
SCLT1-208ENST00000506368 CHCHD10Q8WYQ3 142 aaPredicted RBP10.8□□□□□ -0.68
SCLT1-208ENST00000506368 COX7BP24311 80 aa10.8□□□□□ -0.68
SCLT1-208ENST00000506368 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
SCLT1-208ENST00000506368 PRO0255Q9UI72 69 aa10.79□□□□□ -0.68
SCLT1-208ENST00000506368 GVQW2A0A096LPI5 108 aaPredicted RBP10.78□□□□□ -0.68
SCLT1-208ENST00000506368 PRYO14603 147 aa10.77□□□□□ -0.69
SCLT1-208ENST00000506368 LINC00269Q8N2A0 174 aa10.77□□□□□ -0.69
SCLT1-208ENST00000506368 Q8NDZ9 215 aa10.77□□□□□ -0.69
SCLT1-208ENST00000506368 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
SCLT1-208ENST00000506368 A0A0U1RQV1 116 aa10.75□□□□□ -0.69
SCLT1-208ENST00000506368 REG3AQ06141 175 aa10.75□□□□□ -0.69
SCLT1-208ENST00000506368 ESRGQ1W209 222 aa10.75□□□□□ -0.69
SCLT1-208ENST00000506368 BRK1Q8WUW1 75 aa10.75□□□□□ -0.69
SCLT1-208ENST00000506368 LINC00474Q9P2X8 69 aa10.75□□□□□ -0.69
SCLT1-208ENST00000506368 TENM1Q9UKZ4 2725 aa10.74□□□□□ -0.69
SCLT1-208ENST00000506368 ELOF1P60002 83 aaKnown RBP10.74□□□□□ -0.69
SCLT1-208ENST00000506368 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
SCLT1-208ENST00000506368 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
SCLT1-208ENST00000506368 IGLV1-51P01701 117 aa10.73□□□□□ -0.69
SCLT1-208ENST00000506368 SPAG11BQ08648 103 aa10.73□□□□□ -0.69
SCLT1-208ENST00000506368 OCR1Q9BZK8 76 aa10.73□□□□□ -0.69
SCLT1-208ENST00000506368 A0A1B0GW54 56 aa10.73□□□□□ -0.69
SCLT1-208ENST00000506368 FUSP35637 526 aaKnown RBP eCLIP10.73□□□□□ -0.69
SCLT1-208ENST00000506368 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
SCLT1-208ENST00000506368 ZNF73O43830 326 aaPredicted RBP10.72□□□□□ -0.69
SCLT1-208ENST00000506368 PKIGQ9Y2B9 76 aa10.72□□□□□ -0.69
SCLT1-208ENST00000506368 KRTAP24-1Q3LI83 254 aa10.72□□□□□ -0.69
SCLT1-208ENST00000506368 V9GYY9 64 aa10.72□□□□□ -0.69
SCLT1-208ENST00000506368 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
SCLT1-208ENST00000506368 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
SCLT1-208ENST00000506368 LINC01006Q8NI28 216 aa10.71□□□□□ -0.69
SCLT1-208ENST00000506368 ANGP03950 147 aaKnown RBP10.7□□□□□ -0.7
SCLT1-208ENST00000506368 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
SCLT1-208ENST00000506368 IGKV4-1P06312 121 aa10.7□□□□□ -0.7
SCLT1-208ENST00000506368 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
SCLT1-208ENST00000506368 UNQ6190/PRO20217Q6UXQ8 127 aa10.69□□□□□ -0.7
SCLT1-208ENST00000506368 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
SCLT1-208ENST00000506368 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
SCLT1-208ENST00000506368 Q6ZTC4 211 aa10.67□□□□□ -0.7
SCLT1-208ENST00000506368 IGLV10-54A0A075B6I4 117 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 MDFIQ99750 246 aa10.65□□□□□ -0.7
SCLT1-208ENST00000506368 LCE6AA0A183 80 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms