RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ZNF815PA8K554 130 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 H7C423 109 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 TCL1BO95988 128 aa3.85□□□□□ -1.79
SCLT1-207ENST00000506233 H3BUT2 72 aa3.84□□□□□ -1.79
SCLT1-207ENST00000506233 NDUFS5O43920 106 aa3.84□□□□□ -1.79
SCLT1-207ENST00000506233 SDIM1Q6ZPB5 146 aa3.84□□□□□ -1.79
SCLT1-207ENST00000506233 TIMM17BO60830 172 aa3.84□□□□□ -1.79
SCLT1-207ENST00000506233 WFDC2Q14508 124 aa3.84□□□□□ -1.79
SCLT1-207ENST00000506233 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
SCLT1-207ENST00000506233 EPM2AB3EWF7 344 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 PRR4Q16378 134 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 MIAQ16674 131 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 CASC10Q5T4H9 136 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 LYPD5Q6UWN5 251 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 SS18L2Q9UHA2 77 aa3.84□□□□□ -1.8
SCLT1-207ENST00000506233 A0A1B0GV72 72 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 A0A0B4J2C4 111 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 C15orf56Q8N910 161 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 OR11H2Q8NH07 326 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
SCLT1-207ENST00000506233 FAT1Q14517 4588 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 RAB37Q96AX2 223 aa3.83□□□□□ -1.8
SCLT1-207ENST00000506233 LINC01549A6NIU2 74 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
SCLT1-207ENST00000506233 H3BMG7 143 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 ESRGQ1W209 222 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 Q6ZTC4 211 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 ATP5G1P05496 136 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 PRB2P02812 416 aaPredicted RBP3.82□□□□□ -1.8
SCLT1-207ENST00000506233 TMEM243Q9BU79 118 aa3.82□□□□□ -1.8
SCLT1-207ENST00000506233 FAM236DA0A1B0GTK5 79 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 FAM236CP0DP71 79 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 MIFP14174 115 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 CMC4P56277 68 aaPredicted RBP3.81□□□□□ -1.8
SCLT1-207ENST00000506233 TMEM170BQ5T4T1 132 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 CHCHD5Q9BSY4 110 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 DEFB130BP0DP73 79 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 DEFB130AP0DP74 79 aa3.81□□□□□ -1.8
SCLT1-207ENST00000506233 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 PRO0255Q9UI72 69 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 H3BNG1 76 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 C9orf116Q5BN46 136 aaPredicted RBP3.8□□□□□ -1.8
SCLT1-207ENST00000506233 C2orf82Q6UX34 121 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 SH2D6Q7Z4S9 175 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 DEFB121Q5J5C9 76 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
SCLT1-207ENST00000506233 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 TRBV30A0A0K0K1B3 111 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 SMIM13P0DJ93 91 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 NDUFA12Q9UI09 145 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 A0A0J9YWU9 116 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
SCLT1-207ENST00000506233 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 ATP6V0E2Q8NHE4 81 aa3.79□□□□□ -1.8
SCLT1-207ENST00000506233 CCL18P55774 89 aa3.78□□□□□ -1.8
SCLT1-207ENST00000506233 LINC00269Q8N2A0 174 aa3.78□□□□□ -1.8
SCLT1-207ENST00000506233 TRAV13-1A0A0B4J241 112 aa3.78□□□□□ -1.8
SCLT1-207ENST00000506233 PSPHP1O15172 72 aa3.78□□□□□ -1.8
SCLT1-207ENST00000506233 HERVK_113P63121 156 aa3.78□□□□□ -1.8
SCLT1-207ENST00000506233 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
SCLT1-207ENST00000506233 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 LPAP08519 4548 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 IGLV8-61A0A075B6I0 122 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 LINC00588Q9Y4M8 146 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 ZNF706Q9Y5V0 76 aaPredicted RBP3.77□□□□□ -1.81
SCLT1-207ENST00000506233 PAX4O43316 350 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 PMAIP1Q13794 54 aa3.77□□□□□ -1.81
SCLT1-207ENST00000506233 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 Q8IZM0 81 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 NPC2P61916 151 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 LELP1Q5T871 98 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 Q6ZRU5 148 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
SCLT1-207ENST00000506233 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
SCLT1-207ENST00000506233 CLPSL2Q6UWE3 100 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 Q8N377 158 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
SCLT1-207ENST00000506233 A0A087WYN8 130 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 SFTA2Q6UW10 78 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 C7orf33Q8WU49 177 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 CLEC2BQ92478 149 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 KLK5Q9Y337 293 aaPredicted RBP3.75□□□□□ -1.81
SCLT1-207ENST00000506233 TRGV4A0A0C4DH28 118 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 LST1O00453 97 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 DNAH10OSP0CZ25 163 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 C5orf38Q86SI9 138 aa3.75□□□□□ -1.81
SCLT1-207ENST00000506233 F8W1H4 67 aa3.74□□□□□ -1.81
SCLT1-207ENST00000506233 IGLV6-57P01721 117 aa3.74□□□□□ -1.81
SCLT1-207ENST00000506233 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms