RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
UBE3D-206ENST00000505226 Q6ZQT0 140 aa8.05□□□□□ -1.12
UBE3D-206ENST00000505226 S100A7L2Q5SY68 101 aa8.04□□□□□ -1.12
UBE3D-206ENST00000505226 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
UBE3D-206ENST00000505226 TMEM258P61165 79 aa8.03□□□□□ -1.12
UBE3D-206ENST00000505226 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
UBE3D-206ENST00000505226 DEFB135Q30KP9 77 aa8.03□□□□□ -1.12
UBE3D-206ENST00000505226 C5orf47Q569G3 176 aa8.03□□□□□ -1.12
UBE3D-206ENST00000505226 CYSRT1A8MQ03 144 aa8.02□□□□□ -1.13
UBE3D-206ENST00000505226 CELA1Q9UNI1 258 aa8.02□□□□□ -1.13
UBE3D-206ENST00000505226 HIVEP1P15822 2718 aa8.02□□□□□ -1.13
UBE3D-206ENST00000505226 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
UBE3D-206ENST00000505226 ATP5EP2Q5VTU8 51 aa8.02□□□□□ -1.13
UBE3D-206ENST00000505226 IGLV6-57P01721 117 aa8.01□□□□□ -1.13
UBE3D-206ENST00000505226 UBL5Q9BZL1 73 aa8.01□□□□□ -1.13
UBE3D-206ENST00000505226 SMIM9A6NGZ8 99 aa8.01□□□□□ -1.13
UBE3D-206ENST00000505226 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
UBE3D-206ENST00000505226 LYRM9A8MSI8 78 aa8□□□□□ -1.13
UBE3D-206ENST00000505226 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
UBE3D-206ENST00000505226 Q6ZQY7 126 aa8□□□□□ -1.13
UBE3D-206ENST00000505226 LAMTOR3Q9UHA4 124 aa8□□□□□ -1.13
UBE3D-206ENST00000505226 LOC110117498A0A087WWA1 95 aa7.99□□□□□ -1.13
UBE3D-206ENST00000505226 SMR3AQ99954 134 aa7.99□□□□□ -1.13
UBE3D-206ENST00000505226 A0A0J9YWU9 116 aa7.99□□□□□ -1.13
UBE3D-206ENST00000505226 IGHV4-30-4P0DP06 118 aa7.99□□□□□ -1.13
UBE3D-206ENST00000505226 PKD1L1Q8TDX9 2849 aa7.99□□□□□ -1.13
UBE3D-206ENST00000505226 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
UBE3D-206ENST00000505226 LINC01547P58512 204 aaPredicted RBP7.98□□□□□ -1.13
UBE3D-206ENST00000505226 XAGE1AQ9HD64 81 aa7.98□□□□□ -1.13
UBE3D-206ENST00000505226 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
UBE3D-206ENST00000505226 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
UBE3D-206ENST00000505226 Q6ZVQ6 151 aa7.97□□□□□ -1.13
UBE3D-206ENST00000505226 TRAV10A0A0B4J240 114 aa7.97□□□□□ -1.13
UBE3D-206ENST00000505226 DAD1P61803 113 aa7.97□□□□□ -1.13
UBE3D-206ENST00000505226 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
UBE3D-206ENST00000505226 HTN3P15516 51 aa7.96□□□□□ -1.13
UBE3D-206ENST00000505226 HAMPP81172 84 aa7.96□□□□□ -1.14
UBE3D-206ENST00000505226 PRR34Q9NV39 138 aa7.96□□□□□ -1.14
UBE3D-206ENST00000505226 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.14
UBE3D-206ENST00000505226 UNC79Q9P2D8 2635 aa7.96□□□□□ -1.14
UBE3D-206ENST00000505226 Q8NAQ8 132 aa7.95□□□□□ -1.14
UBE3D-206ENST00000505226 C4orf26Q17RF5 130 aa7.94□□□□□ -1.14
UBE3D-206ENST00000505226 LELP1Q5T871 98 aa7.93□□□□□ -1.14
UBE3D-206ENST00000505226 C9orf66Q5T8R8 295 aa7.93□□□□□ -1.14
UBE3D-206ENST00000505226 Q5XG85 94 aa7.93□□□□□ -1.14
UBE3D-206ENST00000505226 MUC7Q8TAX7 377 aa7.93□□□□□ -1.14
UBE3D-206ENST00000505226 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
UBE3D-206ENST00000505226 HELZ2Q9BYK8 2649 aaKnown RBP7.93□□□□□ -1.14
UBE3D-206ENST00000505226 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
UBE3D-206ENST00000505226 H7BZZ5 65 aa7.92□□□□□ -1.14
UBE3D-206ENST00000505226 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
UBE3D-206ENST00000505226 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
UBE3D-206ENST00000505226 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
UBE3D-206ENST00000505226 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
UBE3D-206ENST00000505226 TRAV7A0A075B6U4 112 aa7.9□□□□□ -1.14
UBE3D-206ENST00000505226 HIGD2BQ4VC39 106 aa7.9□□□□□ -1.14
UBE3D-206ENST00000505226 NDUFC2-KCTD14E9PQ53 114 aa7.9□□□□□ -1.15
UBE3D-206ENST00000505226 SNURFQ9Y675 71 aa7.9□□□□□ -1.15
UBE3D-206ENST00000505226 ATRQ13535 2644 aa7.89□□□□□ -1.15
UBE3D-206ENST00000505226 ELOF1P60002 83 aaKnown RBP7.89□□□□□ -1.15
UBE3D-206ENST00000505226 TEP1Q99973 2627 aaKnown RBP7.89□□□□□ -1.15
UBE3D-206ENST00000505226 VPREB1P12018 145 aa7.89□□□□□ -1.15
UBE3D-206ENST00000505226 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
UBE3D-206ENST00000505226 COX7BP24311 80 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 CXCL6P80162 114 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 ANK2Q01484 3957 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 APOC4P55056 127 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 RMI2Q96E14 147 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 SPART-AS1P0CW21 52 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.88□□□□□ -1.15
UBE3D-206ENST00000505226 TM2D3Q9BRN9 247 aa7.88□□□□□ -1.15
UBE3D-206ENST00000505226 MIFP14174 115 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 KRTAP26-1Q6PEX3 210 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 FAM236DA0A1B0GTK5 79 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 FAM236CP0DP71 79 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 HRCT1Q6UXD1 115 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
UBE3D-206ENST00000505226 PDE6GP18545 87 aa7.86□□□□□ -1.15
UBE3D-206ENST00000505226 BCE1O60756 84 aa7.86□□□□□ -1.15
UBE3D-206ENST00000505226 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
UBE3D-206ENST00000505226 Q6ZRU5 148 aa7.86□□□□□ -1.15
UBE3D-206ENST00000505226 TRBV7-6A0A0J9YX20 115 aa7.85□□□□□ -1.15
UBE3D-206ENST00000505226 EPM2AB3EWF7 344 aa7.85□□□□□ -1.15
UBE3D-206ENST00000505226 Q8N9L7 120 aa7.85□□□□□ -1.15
UBE3D-206ENST00000505226 NSD1Q96L73 2696 aaPredicted RBP7.85□□□□□ -1.15
UBE3D-206ENST00000505226 CAMK2N2Q96S95 79 aa7.84□□□□□ -1.15
UBE3D-206ENST00000505226 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
UBE3D-206ENST00000505226 C15orf56Q8N910 161 aa7.84□□□□□ -1.15
UBE3D-206ENST00000505226 H3BQ85 93 aa7.83□□□□□ -1.16
UBE3D-206ENST00000505226 F8WEM9 126 aa7.82□□□□□ -1.16
UBE3D-206ENST00000505226 TENM3Q9P273 2699 aa7.82□□□□□ -1.16
UBE3D-206ENST00000505226 M0R378 163 aa7.82□□□□□ -1.16
UBE3D-206ENST00000505226 Q6ZRP5 223 aa7.82□□□□□ -1.16
UBE3D-206ENST00000505226 WIPF1O43516 503 aa7.81□□□□□ -1.16
UBE3D-206ENST00000505226 HECTD1Q9ULT8 2610 aa7.81□□□□□ -1.16
UBE3D-206ENST00000505226 EGFEM1PQ0D2K5 195 aa7.81□□□□□ -1.16
UBE3D-206ENST00000505226 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
UBE3D-206ENST00000505226 RETNQ9HD89 108 aa7.8□□□□□ -1.16
UBE3D-206ENST00000505226 KPRPQ5T749 579 aaPredicted RBP7.79□□□□□ -1.16
UBE3D-206ENST00000505226 SERP1Q9Y6X1 66 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms