RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZNF575Q86XF7 245 aa9.72□□□□□ -0.85
TCOF1-207ENST00000504761 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
TCOF1-207ENST00000504761 Q6ZRU5 148 aa9.72□□□□□ -0.85
TCOF1-207ENST00000504761 NF1P21359 2839 aa9.71□□□□□ -0.85
TCOF1-207ENST00000504761 DCHS2Q6V1P9 2916 aa9.71□□□□□ -0.86
TCOF1-207ENST00000504761 LOC107984640A0A0U1RRK4 108 aa9.7□□□□□ -0.86
TCOF1-207ENST00000504761 PLAC8L1A1L4L8 177 aa9.7□□□□□ -0.86
TCOF1-207ENST00000504761 C9orf153Q5TBE3 101 aa9.7□□□□□ -0.86
TCOF1-207ENST00000504761 LINC00337Q8N6G1 96 aa9.7□□□□□ -0.86
TCOF1-207ENST00000504761 ZFHX4Q86UP3 3567 aa9.69□□□□□ -0.86
TCOF1-207ENST00000504761 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
TCOF1-207ENST00000504761 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
TCOF1-207ENST00000504761 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
TCOF1-207ENST00000504761 B9D2Q9BPU9 175 aa9.68□□□□□ -0.86
TCOF1-207ENST00000504761 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
TCOF1-207ENST00000504761 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
TCOF1-207ENST00000504761 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
TCOF1-207ENST00000504761 A0A087WYN8 130 aa9.66□□□□□ -0.86
TCOF1-207ENST00000504761 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
TCOF1-207ENST00000504761 K7EIL1 84 aa9.65□□□□□ -0.86
TCOF1-207ENST00000504761 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.86
TCOF1-207ENST00000504761 LINC01556Q5JQF7 62 aa9.65□□□□□ -0.86
TCOF1-207ENST00000504761 SOSTDC1Q6X4U4 206 aa9.65□□□□□ -0.86
TCOF1-207ENST00000504761 SDIM1Q6ZPB5 146 aa9.64□□□□□ -0.87
TCOF1-207ENST00000504761 H3BQ85 93 aa9.64□□□□□ -0.87
TCOF1-207ENST00000504761 M0QXV9 152 aa9.64□□□□□ -0.87
TCOF1-207ENST00000504761 CCKP06307 115 aa9.64□□□□□ -0.87
TCOF1-207ENST00000504761 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
TCOF1-207ENST00000504761 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
TCOF1-207ENST00000504761 MDFIQ99750 246 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 A0A1B0GX51 115 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 FBN2P35556 2912 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 NDUFS5O43920 106 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 LINC00588Q9Y4M8 146 aa9.62□□□□□ -0.87
TCOF1-207ENST00000504761 NHLRC4P0CG21 123 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-207ENST00000504761 MUC7Q8TAX7 377 aa9.61□□□□□ -0.87
TCOF1-207ENST00000504761 PDE6GP18545 87 aa9.61□□□□□ -0.87
TCOF1-207ENST00000504761 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
TCOF1-207ENST00000504761 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
TCOF1-207ENST00000504761 NIPBLQ6KC79 2804 aaeCLIP9.6□□□□□ -0.873e-7■■■■■ 27.8
TCOF1-207ENST00000504761 Q8N814 137 aa9.6□□□□□ -0.87
TCOF1-207ENST00000504761 B5MCH6 92 aa9.59□□□□□ -0.87
TCOF1-207ENST00000504761 H3BNG1 76 aa9.59□□□□□ -0.87
TCOF1-207ENST00000504761 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
TCOF1-207ENST00000504761 BPY2O14599 106 aa9.58□□□□□ -0.88
TCOF1-207ENST00000504761 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-207ENST00000504761 NDUFC2O95298 119 aa9.57□□□□□ -0.88
TCOF1-207ENST00000504761 DHRS4-AS1Q9P1J3 65 aa9.57□□□□□ -0.88
TCOF1-207ENST00000504761 H0Y9J4 135 aa9.56□□□□□ -0.88
TCOF1-207ENST00000504761 XGP55808 180 aa9.55□□□□□ -0.88
TCOF1-207ENST00000504761 NDUFV3P56181 108 aaKnown RBP9.55□□□□□ -0.88
TCOF1-207ENST00000504761 NDUFB1O75438 58 aa9.55□□□□□ -0.88
TCOF1-207ENST00000504761 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-207ENST00000504761 UPK3BQ9BT76 320 aa9.54□□□□□ -0.88
TCOF1-207ENST00000504761 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
TCOF1-207ENST00000504761 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
TCOF1-207ENST00000504761 C1orf134Q5TEV5 83 aa9.54□□□□□ -0.88
TCOF1-207ENST00000504761 C7orf33Q8WU49 177 aa9.54□□□□□ -0.88
TCOF1-207ENST00000504761 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
TCOF1-207ENST00000504761 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
TCOF1-207ENST00000504761 LITAFQ99732 161 aa9.53□□□□□ -0.88
TCOF1-207ENST00000504761 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
TCOF1-207ENST00000504761 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
TCOF1-207ENST00000504761 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
TCOF1-207ENST00000504761 PRLHP81277 87 aa9.52□□□□□ -0.89
TCOF1-207ENST00000504761 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
TCOF1-207ENST00000504761 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
TCOF1-207ENST00000504761 ATOX1O00244 68 aa9.51□□□□□ -0.89
TCOF1-207ENST00000504761 FAM218AQ96MZ4 157 aa9.5□□□□□ -0.89
TCOF1-207ENST00000504761 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
TCOF1-207ENST00000504761 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-207ENST00000504761 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
TCOF1-207ENST00000504761 KMT2BQ9UMN6 2715 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-207ENST00000504761 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.89
TCOF1-207ENST00000504761 LINC00167Q96N53 147 aa9.46□□□□□ -0.89
TCOF1-207ENST00000504761 MXRA5Q9NR99 2828 aa9.45□□□□□ -0.9
TCOF1-207ENST00000504761 NBDYA0A0U1RRE5 68 aa9.45□□□□□ -0.9
TCOF1-207ENST00000504761 F8WDY8 70 aa9.44□□□□□ -0.9
TCOF1-207ENST00000504761 C1orf137Q5JT78 98 aa9.44□□□□□ -0.9
TCOF1-207ENST00000504761 Q6ZRP5 223 aa9.44□□□□□ -0.9
TCOF1-207ENST00000504761 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
TCOF1-207ENST00000504761 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
TCOF1-207ENST00000504761 SMG1Q96Q15 3661 aaKnown RBP9.44□□□□□ -0.9
TCOF1-207ENST00000504761 TM2D3Q9BRN9 247 aa9.43□□□□□ -0.9
TCOF1-207ENST00000504761 PRR34Q9NV39 138 aa9.43□□□□□ -0.9
TCOF1-207ENST00000504761 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
TCOF1-207ENST00000504761 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
TCOF1-207ENST00000504761 A0A087WVE0 104 aa9.42□□□□□ -0.9
TCOF1-207ENST00000504761 C20orf197Q8N268 126 aa9.41□□□□□ -0.9
TCOF1-207ENST00000504761 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.9
TCOF1-207ENST00000504761 PRYO14603 147 aa9.4□□□□□ -0.9
TCOF1-207ENST00000504761 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
TCOF1-207ENST00000504761 FAM168BA1KXE4 195 aa9.4□□□□□ -0.91
TCOF1-207ENST00000504761 GVQW2A0A096LPI5 108 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-207ENST00000504761 FAM19A3Q7Z5A8 133 aa9.39□□□□□ -0.91
TCOF1-207ENST00000504761 MP68P56378 58 aa9.39□□□□□ -0.91
TCOF1-207ENST00000504761 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
TCOF1-207ENST00000504761 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
TCOF1-207ENST00000504761 ATP5EP2Q5VTU8 51 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms