RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 FMN2Q9NZ56 1722 aa1.15□□□□□ -2.23
TRAPPC13-206ENST00000504751 KIAA0556O60303 1618 aa1.15□□□□□ -2.23
TRAPPC13-206ENST00000504751 EFCAB5A4FU69 1503 aa1.15□□□□□ -2.23
TRAPPC13-206ENST00000504751 WIZO95785 1651 aa1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 DIP2AQ14689 1571 aa1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 CDC42BPGQ6DT37 1551 aa1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 A0A087WWC5 75 aa1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 POLR1AO95602 1720 aaPredicted RBP1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 URB2Q14146 1524 aaKnown RBP1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 LRRC7Q96NW7 1537 aa1.14□□□□□ -2.23
TRAPPC13-206ENST00000504751 NKTRP30414 1462 aaKnown RBP1.13□□□□□ -2.23
TRAPPC13-206ENST00000504751 ATP5EP2Q5VTU8 51 aa1.13□□□□□ -2.23
TRAPPC13-206ENST00000504751 CRIPTQ9P021 101 aa1.13□□□□□ -2.23
TRAPPC13-206ENST00000504751 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
TRAPPC13-206ENST00000504751 TSC2P49815 1807 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 ANKRD17O75179 2603 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 FXYD6-FXYD2A0A087WZ82 144 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 WFDC9Q8NEX5 89 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 GAFA1Q96PS6 74 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 PLCH1Q4KWH8 1693 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 HFM1A2PYH4 1435 aa1.12□□□□□ -2.23
TRAPPC13-206ENST00000504751 PAPPAQ13219 1627 aa1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 TULP4Q9NRJ4 1543 aa1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 C3orf79P0CE67 100 aa1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 DOPEY2Q9Y3R5 2298 aa1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 THOC2Q8NI27 1593 aaKnown RBP1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 A0A0G2JMZ2 1700 aa1.11□□□□□ -2.23
TRAPPC13-206ENST00000504751 PREX1Q8TCU6 1659 aa1.1□□□□□ -2.23
TRAPPC13-206ENST00000504751 A0A0D9SG42 100 aa1.1□□□□□ -2.23
TRAPPC13-206ENST00000504751 NREPQ16612 68 aa1.1□□□□□ -2.23
TRAPPC13-206ENST00000504751 CCDC180Q9P1Z9 1646 aa1.1□□□□□ -2.23
TRAPPC13-206ENST00000504751 CFAP43Q8NDM7 1665 aa1.1□□□□□ -2.23
TRAPPC13-206ENST00000504751 QSER1Q2KHR3 1735 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 RICTORQ6R327 1708 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 I3L2K1 104 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 SFTA3P0C7M3 94 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 SPINK9Q5DT21 86 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
TRAPPC13-206ENST00000504751 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
TRAPPC13-206ENST00000504751 COX7BP24311 80 aa1.08□□□□□ -2.24
TRAPPC13-206ENST00000504751 GNG13Q9P2W3 67 aa1.08□□□□□ -2.24
TRAPPC13-206ENST00000504751 FBN2P35556 2912 aa1.08□□□□□ -2.24
TRAPPC13-206ENST00000504751 NRAPQ86VF7 1730 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 LMTK2Q8IWU2 1503 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 A0A0D9SFI3 127 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 LCE6AA0A183 80 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 NDUFB1O75438 58 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 FXYD6P3P58550 94 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 GLI2P10070 1586 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 FAM208BQ5VWN6 2430 aa1.07□□□□□ -2.24
TRAPPC13-206ENST00000504751 RALGAPBQ86X10 1494 aa1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 USF3Q68DE3 2245 aa1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 ATXN8Q156A1 80 aa1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 FAM103A1Q9BTL3 118 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 NESP48681 1621 aa1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 CICQ96RK0 1608 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-206ENST00000504751 LRRC37AA6NMS7 1700 aa1.05□□□□□ -2.24
TRAPPC13-206ENST00000504751 TNCP24821 2201 aa1.05□□□□□ -2.24
TRAPPC13-206ENST00000504751 ABCA6Q8N139 1617 aa1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 KIF1AQ12756 1690 aa1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 NHSQ6T4R5 1651 aa1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 ZNF469Q96JG9 3925 aaPredicted RBP1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 EIF2AK4Q9P2K8 1649 aaKnown RBP1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
TRAPPC13-206ENST00000504751 K7EQZ3 153 aa1.03□□□□□ -2.24
TRAPPC13-206ENST00000504751 ENHOQ6UWT2 76 aa1.03□□□□□ -2.24
TRAPPC13-206ENST00000504751 PREX2Q70Z35 1606 aa1.03□□□□□ -2.24
TRAPPC13-206ENST00000504751 TJP1Q07157 1748 aa1.03□□□□□ -2.24
TRAPPC13-206ENST00000504751 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
TRAPPC13-206ENST00000504751 LINC01549A6NIU2 74 aa1.02□□□□□ -2.25
TRAPPC13-206ENST00000504751 CPSF4LA6NMK7 179 aaKnown RBP1.02□□□□□ -2.25
TRAPPC13-206ENST00000504751 DEFB123Q8N688 67 aa1.02□□□□□ -2.25
TRAPPC13-206ENST00000504751 ANKRD50Q9ULJ7 1429 aa1.02□□□□□ -2.25
TRAPPC13-206ENST00000504751 TIAM1Q13009 1591 aa1.01□□□□□ -2.25
TRAPPC13-206ENST00000504751 NDUFA4O00483 81 aa1.01□□□□□ -2.25
TRAPPC13-206ENST00000504751 SPTY2D1-AS1A0A0U1RR47 76 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 COX6A2Q02221 97 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 CNFNQ9BYD5 112 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 PRO0255Q9UI72 69 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 CACNA1EQ15878 2313 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1□□□□□ -2.25
TRAPPC13-206ENST00000504751 PLXNC1O60486 1568 aa1□□□□□ -2.25
TRAPPC13-206ENST00000504751 PIGYQ3MUY2 71 aa0.99□□□□□ -2.25
TRAPPC13-206ENST00000504751 ALS2Q96Q42 1657 aa0.99□□□□□ -2.25
TRAPPC13-206ENST00000504751 C2CD3Q4AC94 2353 aa0.99□□□□□ -2.25
TRAPPC13-206ENST00000504751 MEGF8Q7Z7M0 2845 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 CACNA1HO95180 2353 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 MROH2AA6NES4 1674 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 ITSN2Q9NZM3 1697 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 LELP1Q5T871 98 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 NWD1Q149M9 1564 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 PTPRZ1P23471 2315 aaPredicted RBP0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 PTPRQQ9UMZ3 2332 aa0.98□□□□□ -2.25
TRAPPC13-206ENST00000504751 K7EMI3 77 aa0.97□□□□□ -2.25
TRAPPC13-206ENST00000504751 SMIM5Q71RC9 77 aa0.97□□□□□ -2.25
TRAPPC13-206ENST00000504751 DDX60LQ5H9U9 1706 aaKnown RBP0.96□□□□□ -2.26
TRAPPC13-206ENST00000504751 I3L3M4 83 aa0.96□□□□□ -2.26
TRAPPC13-206ENST00000504751 Q8IZM0 81 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms