RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TSPEAR-AS2P59090 65 aa15.42■□□□□ 0.06
PVT1-201ENST00000504719 SND1-IT1Q9HBX3 110 aa15.42■□□□□ 0.06
PVT1-201ENST00000504719 NDUFA12Q9UI09 145 aa15.42■□□□□ 0.06
PVT1-201ENST00000504719 LINC00158P58513 81 aa15.41■□□□□ 0.06
PVT1-201ENST00000504719 LBHQ53QV2 105 aaPredicted RBP15.41■□□□□ 0.06
PVT1-201ENST00000504719 DIRC1Q969H9 104 aa15.41■□□□□ 0.06
PVT1-201ENST00000504719 PLEKHB2Q96CS7 222 aa15.41■□□□□ 0.06
PVT1-201ENST00000504719 TP73-AS1Q9UF72 201 aa15.41■□□□□ 0.06
PVT1-201ENST00000504719 A0A0U1RRA0 63 aa15.4■□□□□ 0.06
PVT1-201ENST00000504719 PET117Q6UWS5 81 aa15.4■□□□□ 0.06
PVT1-201ENST00000504719 MRPL55Q7Z7F7 128 aaKnown RBP15.4■□□□□ 0.06
PVT1-201ENST00000504719 C3orf79P0CE67 100 aa15.39■□□□□ 0.05
PVT1-201ENST00000504719 HERV-K104P63124 156 aa15.39■□□□□ 0.05
PVT1-201ENST00000504719 LINC01545Q5VT33 79 aa15.39■□□□□ 0.05
PVT1-201ENST00000504719 MYMXA0A1B0GTQ4 84 aa15.38■□□□□ 0.05
PVT1-201ENST00000504719 J3QQQ9 107 aa15.38■□□□□ 0.05
PVT1-201ENST00000504719 MEIG1Q5JSS6 88 aa15.38■□□□□ 0.05
PVT1-201ENST00000504719 H0Y9J4 135 aa15.37■□□□□ 0.05
PVT1-201ENST00000504719 SMIM13P0DJ93 91 aa15.37■□□□□ 0.05
PVT1-201ENST00000504719 KRTDAPP60985 99 aa15.37■□□□□ 0.05
PVT1-201ENST00000504719 IGLV5-37A0A075B6J1 123 aa15.36■□□□□ 0.05
PVT1-201ENST00000504719 NKAPP1Q8N9T2 125 aa15.36■□□□□ 0.05
PVT1-201ENST00000504719 LINC00167Q96N53 147 aa15.35■□□□□ 0.05
PVT1-201ENST00000504719 LGALS3P17931 250 aaKnown RBP15.34■□□□□ 0.05
PVT1-201ENST00000504719 GAGE10A6NGK3 116 aa15.33■□□□□ 0.04
PVT1-201ENST00000504719 UBR4Q5T4S7 5183 aa15.32■□□□□ 0.04
PVT1-201ENST00000504719 RPL37AP8A6NKH3 93 aa15.32■□□□□ 0.04
PVT1-201ENST00000504719 LINC00587B1AMM8 73 aa15.32■□□□□ 0.04
PVT1-201ENST00000504719 E9PLD3 99 aa15.32■□□□□ 0.04
PVT1-201ENST00000504719 VPREB1P12018 145 aa15.32■□□□□ 0.04
PVT1-201ENST00000504719 NMUP48645 174 aa15.31■□□□□ 0.04
PVT1-201ENST00000504719 RPL24P83731 157 aaKnown RBP15.31■□□□□ 0.04
PVT1-201ENST00000504719 MIR7-3HGQ8N6C7 128 aa15.31■□□□□ 0.04
PVT1-201ENST00000504719 Q8NDZ9 215 aa15.3■□□□□ 0.04
PVT1-201ENST00000504719 HIST3H2BBQ8N257 126 aa15.28■□□□□ 0.04
PVT1-201ENST00000504719 PRR26Q8N8Z3 221 aa15.28■□□□□ 0.04
PVT1-201ENST00000504719 C20orf202A1L168 122 aa15.26■□□□□ 0.03
PVT1-201ENST00000504719 ZNF861PO60384 105 aa15.26■□□□□ 0.03
PVT1-201ENST00000504719 KRTAP1-4P0C5Y4 121 aa15.26■□□□□ 0.03
PVT1-201ENST00000504719 S100A6P06703 90 aa15.25■□□□□ 0.03
PVT1-201ENST00000504719 IGKV2-28A0A075B6P5 120 aa15.24■□□□□ 0.03
PVT1-201ENST00000504719 IGKV2D-28P01615 120 aa15.24■□□□□ 0.03
PVT1-201ENST00000504719 S100A2P29034 98 aa15.24■□□□□ 0.03
PVT1-201ENST00000504719 BOD1L2Q8IYS8 172 aa15.23■□□□□ 0.03
PVT1-201ENST00000504719 DAND5Q8N907 189 aa15.23■□□□□ 0.03
PVT1-201ENST00000504719 HIST1H2BLQ99880 126 aa15.23■□□□□ 0.03
PVT1-201ENST00000504719 IGLV1-50A0A075B6I6 118 aa15.22■□□□□ 0.03
PVT1-201ENST00000504719 BCE1O60756 84 aa15.21■□□□□ 0.03
PVT1-201ENST00000504719 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
PVT1-201ENST00000504719 A0A0J9YXY3 114 aa15.2■□□□□ 0.02
PVT1-201ENST00000504719 LRP2P98164 4655 aa15.19■□□□□ 0.02
PVT1-201ENST00000504719 ATOH7Q8N100 152 aa15.19■□□□□ 0.02
PVT1-201ENST00000504719 M0R378 163 aa15.17■□□□□ 0.02
PVT1-201ENST00000504719 SNRPEP62304 92 aaKnown RBP15.17■□□□□ 0.02
PVT1-201ENST00000504719 NCR3O14931 201 aa15.15■□□□□ 0.02
PVT1-201ENST00000504719 AKR1D1P51857 326 aa15.15■□□□□ 0.02
PVT1-201ENST00000504719 TTTY13Q9BZ97 58 aa15.15■□□□□ 0.02
PVT1-201ENST00000504719 LOC107984156A0A0G2JMH3 177 aa15.14■□□□□ 0.01
PVT1-201ENST00000504719 ZNF815PA8K554 130 aa15.14■□□□□ 0.01
PVT1-201ENST00000504719 TMEM238C9JI98 176 aa15.14■□□□□ 0.01
PVT1-201ENST00000504719 RPL28P46779 137 aaKnown RBP15.14■□□□□ 0.01
PVT1-201ENST00000504719 ADAMTSL4-AS1Q5T5F5 129 aa15.14■□□□□ 0.01
PVT1-201ENST00000504719 ARL17AQ8IVW1 177 aa15.14■□□□□ 0.01
PVT1-201ENST00000504719 ANKRD39Q53RE8 183 aa15.13■□□□□ 0.01
PVT1-201ENST00000504719 MIEN1Q9BRT3 115 aa15.13■□□□□ 0.01
PVT1-201ENST00000504719 TMEM126AQ9H061 195 aa15.13■□□□□ 0.01
PVT1-201ENST00000504719 RPL13AP40429 203 aaKnown RBP15.12■□□□□ 0.01
PVT1-201ENST00000504719 UBE2AP49459 152 aa15.11■□□□□ 0.01
PVT1-201ENST00000504719 C5orf52A6NGY3 159 aa15.1■□□□□ 0.01
PVT1-201ENST00000504719 NPC2P61916 151 aa15.1■□□□□ 0.01
PVT1-201ENST00000504719 LITAFQ99732 161 aa15.09■□□□□ 0.01
PVT1-201ENST00000504719 SOSTDC1Q6X4U4 206 aa15.08■□□□□ 0
PVT1-201ENST00000504719 KRTAP13-1Q8IUC0 172 aa15.08■□□□□ 0
PVT1-201ENST00000504719 EIF4EBP3O60516 100 aaPredicted RBP15.07■□□□□ 0
PVT1-201ENST00000504719 TIMM17BO60830 172 aa15.07■□□□□ 0
PVT1-201ENST00000504719 FAM19A1Q7Z5A9 133 aa15.07■□□□□ 0
PVT1-201ENST00000504719 PRLHP81277 87 aa15.05■□□□□ -0
PVT1-201ENST00000504719 TRBV10-3A0A0K0K1G6 114 aa15.04■□□□□ -0
PVT1-201ENST00000504719 NDUFC2O95298 119 aa15.04■□□□□ -0
PVT1-201ENST00000504719 SPANXB1Q9NS25 103 aaPredicted RBP15.04■□□□□ -0
PVT1-201ENST00000504719 TRBV10-2A0A0K0K1G8 114 aa15.03■□□□□ -0
PVT1-201ENST00000504719 PRYO14603 147 aa15.03■□□□□ -0
PVT1-201ENST00000504719 SCGB1D4Q6XE38 83 aa15.03■□□□□ -0
PVT1-201ENST00000504719 PCP2Q8IVA1 136 aa15.02■□□□□ -0
PVT1-201ENST00000504719 LINC00308Q8TCZ7 52 aa15.02■□□□□ -0
PVT1-201ENST00000504719 KCNQ1DNQ9H478 68 aa15.01□□□□□ -0.01
PVT1-201ENST00000504719 A0A087X002 238 aa15□□□□□ -0.01
PVT1-201ENST00000504719 DDTP30046 118 aa15□□□□□ -0.01
PVT1-201ENST00000504719 SCGB1D1O95968 90 aa14.99□□□□□ -0.01
PVT1-201ENST00000504719 HSBP1L1C9JCN9 74 aa14.98□□□□□ -0.01
PVT1-201ENST00000504719 CRYGAP11844 174 aa14.97□□□□□ -0.01
PVT1-201ENST00000504719 S100A12P80511 92 aa14.97□□□□□ -0.01
PVT1-201ENST00000504719 S100A7L2Q5SY68 101 aa14.97□□□□□ -0.01
PVT1-201ENST00000504719 SPRR1AP35321 89 aa14.96□□□□□ -0.01
PVT1-201ENST00000504719 SPANXCQ9NY87 97 aa14.96□□□□□ -0.01
PVT1-201ENST00000504719 LPAP08519 4548 aa14.95□□□□□ -0.02
PVT1-201ENST00000504719 LINC00337Q8N6G1 96 aa14.95□□□□□ -0.02
PVT1-201ENST00000504719 SPANXDQ9BXN6 97 aa14.95□□□□□ -0.02
PVT1-201ENST00000504719 ANAPC11Q9NYG5 84 aa14.95□□□□□ -0.02
PVT1-201ENST00000504719 IGLV6-57P01721 117 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms