RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 ZC2HC1BQ5TFG8 222 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 PET117Q6UWS5 81 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
PDGFC-204ENST00000504672 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
PDGFC-204ENST00000504672 F8WDY8 70 aa5.31□□□□□ -1.56
PDGFC-204ENST00000504672 S100A6P06703 90 aa5.31□□□□□ -1.56
PDGFC-204ENST00000504672 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
PDGFC-204ENST00000504672 KIAA0087Q14695 138 aa5.31□□□□□ -1.56
PDGFC-204ENST00000504672 FAM19A5Q7Z5A7 132 aaPredicted RBP5.31□□□□□ -1.56
PDGFC-204ENST00000504672 C11orf86A6NJI1 115 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 COX7A2LO14548 114 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 C3orf79P0CE67 100 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 ZNF22P17026 224 aaPredicted RBP5.3□□□□□ -1.56
PDGFC-204ENST00000504672 AKR1D1P51857 326 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 SNRPEP62304 92 aaKnown RBP5.3□□□□□ -1.56
PDGFC-204ENST00000504672 OR10D4PQ8NGN7 298 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 MAP1LC3CQ9BXW4 147 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 MRPL35Q9NZE8 188 aaKnown RBP5.3□□□□□ -1.56
PDGFC-204ENST00000504672 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
PDGFC-204ENST00000504672 SMIM1B2RUZ4 78 aa5.29□□□□□ -1.56
PDGFC-204ENST00000504672 PLNP26678 52 aa5.29□□□□□ -1.56
PDGFC-204ENST00000504672 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
PDGFC-204ENST00000504672 C2orf48Q96LS8 159 aa5.29□□□□□ -1.56
PDGFC-204ENST00000504672 CHTOPQ9Y3Y2 248 aaKnown RBP5.29□□□□□ -1.56
PDGFC-204ENST00000504672 A0A087X002 238 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 FABP4P15090 132 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 UBE2BP63146 152 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 C5orf38Q86SI9 138 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 Q8IZM0 81 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
PDGFC-204ENST00000504672 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 TMEM223A0PJW6 202 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 DPM2O94777 84 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 RNF151Q2KHN1 245 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
PDGFC-204ENST00000504672 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
PDGFC-204ENST00000504672 H3BRM9 83 aa5.26□□□□□ -1.57
PDGFC-204ENST00000504672 S100A2P29034 98 aa5.26□□□□□ -1.57
PDGFC-204ENST00000504672 C10orf25Q5T742 122 aa5.26□□□□□ -1.57
PDGFC-204ENST00000504672 TYMSOSQ8TAI1 123 aa5.26□□□□□ -1.57
PDGFC-204ENST00000504672 ZNF861PO60384 105 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 IGKCP01834 107 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 CXCL5P42830 114 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 SPAG11BQ08648 103 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 LINC00469Q8N7U9 141 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
PDGFC-204ENST00000504672 E9PLD3 99 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 M0QXV9 152 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 JOSD1Q15040 202 aaPredicted RBP5.24□□□□□ -1.57
PDGFC-204ENST00000504672 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 SFTA2Q6UW10 78 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
PDGFC-204ENST00000504672 ZNF625Q96I27 306 aaPredicted RBP5.24□□□□□ -1.57
PDGFC-204ENST00000504672 TRBV30A0A0K0K1B3 111 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 C20orf202A1L168 122 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 CRYGAP11844 174 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 KRTDAPP60985 99 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 TPRXLQ17RH7 258 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 ORAOV1Q8WV07 137 aa5.23□□□□□ -1.57
PDGFC-204ENST00000504672 B5MCH6 92 aa5.22□□□□□ -1.57
PDGFC-204ENST00000504672 LEPROTO15243 131 aa5.22□□□□□ -1.57
PDGFC-204ENST00000504672 TMEM170BQ5T4T1 132 aa5.22□□□□□ -1.57
PDGFC-204ENST00000504672 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
PDGFC-204ENST00000504672 COX7B2Q8TF08 81 aa5.22□□□□□ -1.57
PDGFC-204ENST00000504672 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 NMUP48645 174 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 KRTAP13-2Q52LG2 175 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 PMCHL2Q9BQD1 86 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 C6orf48Q9UBA6 75 aa5.21□□□□□ -1.58
PDGFC-204ENST00000504672 NDUFA1O15239 70 aa5.2□□□□□ -1.58
PDGFC-204ENST00000504672 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
PDGFC-204ENST00000504672 PYY3Q5JQD4 70 aa5.2□□□□□ -1.58
PDGFC-204ENST00000504672 LOC107984156A0A0G2JMH3 177 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 H0Y8G0 127 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 J3QQQ9 107 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 PRSS2P07478 247 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 HERVK_113P61574 105 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 HERV-K104P63124 156 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 COX17Q14061 63 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 C6orf226Q5I0X4 101 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
PDGFC-204ENST00000504672 ARL17AQ8IVW1 177 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 LINC00304Q8N9R0 145 aa5.19□□□□□ -1.58
PDGFC-204ENST00000504672 IGKV2D-26A0A0A0MRZ7 120 aa5.18□□□□□ -1.58
PDGFC-204ENST00000504672 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
PDGFC-204ENST00000504672 C2orf82Q6UX34 121 aa5.18□□□□□ -1.58
PDGFC-204ENST00000504672 LOC105371267A0A1B0GV96 52 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 NDUFC2-KCTD14E9PQ53 114 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 DLEU1O43261 78 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 TIMM17BO60830 172 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 CKS1BP61024 79 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 LINC00337Q8N6G1 96 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 C22orf24Q9Y442 160 aa5.17□□□□□ -1.58
PDGFC-204ENST00000504672 MYMXA0A1B0GTQ4 84 aa5.16□□□□□ -1.58
PDGFC-204ENST00000504672 LINC00587B1AMM8 73 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms