RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
UBE2B-204ENST00000504431 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
UBE2B-204ENST00000504431 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BKO60814 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BJP06899 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BOP23527 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BBP33778 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BDP58876 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BCP62807 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HERVK_113P63121 156 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST2H2BEQ16778 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.66□□□□□ -1.66
UBE2B-204ENST00000504431 Q5VSD8 79 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 FAM19A3Q7Z5A8 133 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BHQ93079 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 IFI27L1Q96BM0 104 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 PACRGQ96M98 296 aaPredicted RBP4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BNQ99877 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 HIST1H2BMQ99879 126 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 C6orf48Q9UBA6 75 aa4.66□□□□□ -1.66
UBE2B-204ENST00000504431 TINCRA0A1B0GVN0 87 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 C11orf86A6NJI1 115 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 ATP5LO75964 103 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
UBE2B-204ENST00000504431 C6orf226Q5I0X4 101 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 OR10D4PQ8NGN7 298 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
UBE2B-204ENST00000504431 CHTOPQ9Y3Y2 248 aaKnown RBP4.65□□□□□ -1.67
UBE2B-204ENST00000504431 FAT1Q14517 4588 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 A0A0U1RRA0 63 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 FAM168BA1KXE4 195 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 NDUFA1O15239 70 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 IGLC3P0DOY3 106 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 ZNF22P17026 224 aaPredicted RBP4.64□□□□□ -1.67
UBE2B-204ENST00000504431 S100A1P23297 94 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
UBE2B-204ENST00000504431 MRPL35Q9NZE8 188 aaKnown RBP4.64□□□□□ -1.67
UBE2B-204ENST00000504431 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 LOC107984640A0A0U1RRK4 108 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 A0A1W2PNN7 141 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 LEPROTL1O95214 131 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 CKS1BP61024 79 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 SEC11AP67812 179 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 COX7B2Q8TF08 81 aa4.63□□□□□ -1.67
UBE2B-204ENST00000504431 CIRBPQ14011 172 aaKnown RBP4.62□□□□□ -1.67
UBE2B-204ENST00000504431 LINC01561Q8N1V8 128 aa4.62□□□□□ -1.67
UBE2B-204ENST00000504431 ZNF625Q96I27 306 aaPredicted RBP4.62□□□□□ -1.67
UBE2B-204ENST00000504431 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
UBE2B-204ENST00000504431 H3BRM9 83 aa4.61□□□□□ -1.67
UBE2B-204ENST00000504431 Q8IZM0 81 aa4.61□□□□□ -1.67
UBE2B-204ENST00000504431 XAGE1AQ9HD64 81 aa4.61□□□□□ -1.67
UBE2B-204ENST00000504431 TRAV12-1A0A0B4J245 112 aa4.6□□□□□ -1.67
UBE2B-204ENST00000504431 F8VRH5 84 aa4.6□□□□□ -1.67
UBE2B-204ENST00000504431 INAFM2P0DMQ5 153 aa4.6□□□□□ -1.67
UBE2B-204ENST00000504431 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
UBE2B-204ENST00000504431 C9orf129Q5T035 196 aaKnown RBP4.6□□□□□ -1.67
UBE2B-204ENST00000504431 PHF5AQ7RTV0 110 aaKnown RBP4.6□□□□□ -1.67
UBE2B-204ENST00000504431 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
UBE2B-204ENST00000504431 PLAC8Q9NZF1 115 aa4.6□□□□□ -1.67
UBE2B-204ENST00000504431 HSPB8Q9UJY1 196 aa4.6□□□□□ -1.67
UBE2B-204ENST00000504431 TRBV30A0A0K0K1B3 111 aa4.59□□□□□ -1.67
UBE2B-204ENST00000504431 TMEM223A0PJW6 202 aa4.59□□□□□ -1.67
UBE2B-204ENST00000504431 PFN2P35080 140 aa4.59□□□□□ -1.67
UBE2B-204ENST00000504431 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
UBE2B-204ENST00000504431 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
UBE2B-204ENST00000504431 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.67
UBE2B-204ENST00000504431 NDUFC2-KCTD14E9PQ53 114 aa4.58□□□□□ -1.68
UBE2B-204ENST00000504431 F8WDY8 70 aa4.58□□□□□ -1.68
UBE2B-204ENST00000504431 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
UBE2B-204ENST00000504431 KRTAP11-1Q8IUC1 163 aa4.58□□□□□ -1.68
UBE2B-204ENST00000504431 MAP1LC3CQ9BXW4 147 aa4.58□□□□□ -1.68
UBE2B-204ENST00000504431 SYS1-DBNDD2H3BUS1 97 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 C3orf79P0CE67 100 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 TSPEAR-AS2P59090 65 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 KRTDAPP60985 99 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 LINC00474Q9P2X8 69 aa4.57□□□□□ -1.68
UBE2B-204ENST00000504431 SRRM2Q9UQ35 2752 aaKnown RBP4.56□□□□□ -1.68
UBE2B-204ENST00000504431 DPM2O94777 84 aa4.56□□□□□ -1.68
UBE2B-204ENST00000504431 IGKCP01834 107 aa4.56□□□□□ -1.68
UBE2B-204ENST00000504431 CXCL5P42830 114 aa4.56□□□□□ -1.68
UBE2B-204ENST00000504431 COA6Q5JTJ3 125 aaKnown RBP4.56□□□□□ -1.68
UBE2B-204ENST00000504431 LINC00158P58513 81 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 CXCL6P80162 114 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 ATOH7Q8N100 152 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 ERG28Q9UKR5 140 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 PKIGQ9Y2B9 76 aa4.55□□□□□ -1.68
UBE2B-204ENST00000504431 M0QXV9 152 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 SMIM13P0DJ93 91 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 PLNP26678 52 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 PRR3P79522 188 aaKnown RBP4.54□□□□□ -1.68
UBE2B-204ENST00000504431 HIST3H2BBQ8N257 126 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 DAND5Q8N907 189 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 Q8NDZ9 215 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 TTTY13Q9BZ97 58 aa4.54□□□□□ -1.68
UBE2B-204ENST00000504431 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms