RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 SMIM11BQ8TCY0 68 aa6.08□□□□□ -1.44
LINC02239-201ENST00000504339 SMCR5Q8TEV8 140 aa6.08□□□□□ -1.44
LINC02239-201ENST00000504339 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
LINC02239-201ENST00000504339 CRPP02741 224 aa6.07□□□□□ -1.44
LINC02239-201ENST00000504339 MALP21145 153 aa6.07□□□□□ -1.44
LINC02239-201ENST00000504339 C11orf45Q8TAV5 145 aa6.07□□□□□ -1.44
LINC02239-201ENST00000504339 DEFB131BA0A096LNP1 70 aa6.06□□□□□ -1.44
LINC02239-201ENST00000504339 Q9HAA7 133 aa6.06□□□□□ -1.44
LINC02239-201ENST00000504339 CXCL5P42830 114 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 SPAG11BQ08648 103 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 CFAP161Q6P656 301 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 TM2D3Q9BRN9 247 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 COX17Q14061 63 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 SDIM1Q6ZPB5 146 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 IMUPQ9GZP8 106 aa6.05□□□□□ -1.44
LINC02239-201ENST00000504339 LINC00643Q86TS7 51 aa6.04□□□□□ -1.44
LINC02239-201ENST00000504339 A0A087WYN8 130 aa6.04□□□□□ -1.44
LINC02239-201ENST00000504339 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
LINC02239-201ENST00000504339 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
LINC02239-201ENST00000504339 MRAPQ8TCY5 172 aa6.04□□□□□ -1.44
LINC02239-201ENST00000504339 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
LINC02239-201ENST00000504339 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.44
LINC02239-201ENST00000504339 C6orf48Q9UBA6 75 aa6.02□□□□□ -1.44
LINC02239-201ENST00000504339 LINC01556Q5JQF7 62 aa6.02□□□□□ -1.45
LINC02239-201ENST00000504339 MDFIQ99750 246 aa6.02□□□□□ -1.45
LINC02239-201ENST00000504339 GVQW2A0A096LPI5 108 aaPredicted RBP6.01□□□□□ -1.45
LINC02239-201ENST00000504339 NDUFC2O95298 119 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 DNAL4O96015 105 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
LINC02239-201ENST00000504339 C15orf56Q8N910 161 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 LYSTQ99698 3801 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 H0YGX0 51 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 HIGD2BQ4VC39 106 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 SVIPQ8NHG7 77 aa6.01□□□□□ -1.45
LINC02239-201ENST00000504339 LINC00588Q9Y4M8 146 aa6□□□□□ -1.45
LINC02239-201ENST00000504339 LECT2O14960 151 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 TRAV10A0A0B4J240 114 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 NCR3O14931 201 aa5.99□□□□□ -1.45
LINC02239-201ENST00000504339 DNAH10Q8IVF4 4471 aa5.98□□□□□ -1.45
LINC02239-201ENST00000504339 DYNC2H1Q8NCM8 4307 aaKnown RBP5.98□□□□□ -1.45
LINC02239-201ENST00000504339 SLPIP03973 132 aa5.97□□□□□ -1.45
LINC02239-201ENST00000504339 Q6ZRU5 148 aa5.97□□□□□ -1.45
LINC02239-201ENST00000504339 XAGE1AQ9HD64 81 aa5.97□□□□□ -1.45
LINC02239-201ENST00000504339 CSMD3Q7Z407 3707 aa5.97□□□□□ -1.45
LINC02239-201ENST00000504339 CASC10Q5T4H9 136 aa5.96□□□□□ -1.45
LINC02239-201ENST00000504339 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.45
LINC02239-201ENST00000504339 C3orf22Q8N5N4 141 aa5.96□□□□□ -1.45
LINC02239-201ENST00000504339 TMEM126AQ9H061 195 aa5.96□□□□□ -1.45
LINC02239-201ENST00000504339 IGKV2D-24A0A075B6R9 120 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 IGLV6-57P01721 117 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 MUC7Q8TAX7 377 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 C1orf43Q9BWL3 253 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 TENM2Q9NT68 2774 aa5.96□□□□□ -1.46
LINC02239-201ENST00000504339 DNHD1Q96M86 4753 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 ZNF561-AS1K7EIQ3 104 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
LINC02239-201ENST00000504339 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 UQCRQO14949 82 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 RPL18AQ02543 176 aaKnown RBP5.95□□□□□ -1.46
LINC02239-201ENST00000504339 C6orf99Q4VX62 202 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 C9orf153Q5TBE3 101 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 LINC00167Q96N53 147 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
LINC02239-201ENST00000504339 PLECQ15149 4684 aaKnown RBP5.94□□□□□ -1.46
LINC02239-201ENST00000504339 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
LINC02239-201ENST00000504339 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
LINC02239-201ENST00000504339 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
LINC02239-201ENST00000504339 Q6JHZ5 121 aa5.94□□□□□ -1.46
LINC02239-201ENST00000504339 Q6ZRP5 223 aa5.94□□□□□ -1.46
LINC02239-201ENST00000504339 DNAH7Q8WXX0 4024 aa5.93□□□□□ -1.46
LINC02239-201ENST00000504339 VPREB1P12018 145 aa5.93□□□□□ -1.46
LINC02239-201ENST00000504339 Q8N814 137 aa5.93□□□□□ -1.46
LINC02239-201ENST00000504339 TRBV10-3A0A0K0K1G6 114 aa5.92□□□□□ -1.46
LINC02239-201ENST00000504339 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
LINC02239-201ENST00000504339 COX7CP15954 63 aa5.92□□□□□ -1.46
LINC02239-201ENST00000504339 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
LINC02239-201ENST00000504339 ATOX1O00244 68 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 UPK3BQ9BT76 320 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 A0A1B0GX51 115 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 CCKP06307 115 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 KRTAP1-5Q9BYS1 174 aa5.91□□□□□ -1.46
LINC02239-201ENST00000504339 SYCNQ0VAF6 134 aa5.9□□□□□ -1.46
LINC02239-201ENST00000504339 A0A087WVE0 104 aa5.9□□□□□ -1.47
LINC02239-201ENST00000504339 MEGF8Q7Z7M0 2845 aa5.89□□□□□ -1.47
LINC02239-201ENST00000504339 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
LINC02239-201ENST00000504339 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
LINC02239-201ENST00000504339 TMEM256-PLSCR3K7ERE1 68 aa5.88□□□□□ -1.47
LINC02239-201ENST00000504339 CRYGAP11844 174 aa5.88□□□□□ -1.47
LINC02239-201ENST00000504339 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
LINC02239-201ENST00000504339 F8WDY8 70 aa5.88□□□□□ -1.47
LINC02239-201ENST00000504339 SERTAD4-AS1Q5TG53 156 aa5.88□□□□□ -1.47
LINC02239-201ENST00000504339 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
LINC02239-201ENST00000504339 B9D2Q9BPU9 175 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms