RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RAB5AP20339 215 aa6.47□□□□□ -1.37
LSM6-204ENST00000504181 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
LSM6-204ENST00000504181 KRTAP4-2Q9BYR5 136 aa6.47□□□□□ -1.37
LSM6-204ENST00000504181 D6R8Y8 96 aa6.46□□□□□ -1.38
LSM6-204ENST00000504181 TEX46H3BTG2 121 aa6.46□□□□□ -1.38
LSM6-204ENST00000504181 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
LSM6-204ENST00000504181 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
LSM6-204ENST00000504181 SEC11AP67812 179 aa6.44□□□□□ -1.38
LSM6-204ENST00000504181 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
LSM6-204ENST00000504181 LINC00299Q6ZSB3 139 aa6.44□□□□□ -1.38
LSM6-204ENST00000504181 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
LSM6-204ENST00000504181 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
LSM6-204ENST00000504181 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
LSM6-204ENST00000504181 LOC389332A0A1B0GUA5 103 aa6.42□□□□□ -1.38
LSM6-204ENST00000504181 PRYO14603 147 aa6.42□□□□□ -1.38
LSM6-204ENST00000504181 ATP5LO75964 103 aa6.42□□□□□ -1.38
LSM6-204ENST00000504181 CYSLTR1Q9Y271 337 aa6.42□□□□□ -1.38
LSM6-204ENST00000504181 ETDCA0A1B0GVM5 59 aa6.41□□□□□ -1.38
LSM6-204ENST00000504181 SMLR1H3BR10 107 aa6.41□□□□□ -1.38
LSM6-204ENST00000504181 ERC2-IT1O76042 136 aa6.41□□□□□ -1.38
LSM6-204ENST00000504181 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
LSM6-204ENST00000504181 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
LSM6-204ENST00000504181 ZNF345Q14585 488 aa6.4□□□□□ -1.38
LSM6-204ENST00000504181 KANTRA0A1W2PQU2 76 aa6.39□□□□□ -1.39
LSM6-204ENST00000504181 CEBPGP53567 150 aa6.39□□□□□ -1.39
LSM6-204ENST00000504181 OSTCQ9NRP0 149 aa6.39□□□□□ -1.39
LSM6-204ENST00000504181 CHTOPQ9Y3Y2 248 aaKnown RBP6.39□□□□□ -1.39
LSM6-204ENST00000504181 C20orf202A1L168 122 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 IGIPA6NJ69 53 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 SPRR1AP35321 89 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 ERG28Q9UKR5 140 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 V9GYV3 84 aa6.38□□□□□ -1.39
LSM6-204ENST00000504181 TAGLN2P37802 199 aaKnown RBP6.37□□□□□ -1.39
LSM6-204ENST00000504181 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
LSM6-204ENST00000504181 PPBPP02775 128 aa6.35□□□□□ -1.39
LSM6-204ENST00000504181 LGALS3P17931 250 aaKnown RBP6.35□□□□□ -1.39
LSM6-204ENST00000504181 FAM74A3Q4VXF1 159 aa6.35□□□□□ -1.39
LSM6-204ENST00000504181 ZNF625Q96I27 306 aaPredicted RBP6.35□□□□□ -1.39
LSM6-204ENST00000504181 PRELID3AQ96N28 172 aa6.35□□□□□ -1.39
LSM6-204ENST00000504181 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 TMEM250H0YL14 139 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 ORMDL3Q8N138 153 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 BATF3Q9NR55 127 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 NDUFA13Q9P0J0 144 aa6.34□□□□□ -1.39
LSM6-204ENST00000504181 TINCRA0A1B0GVN0 87 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 B5MCH6 92 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 F8W036 122 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 NCR3O14931 201 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 COX17Q14061 63 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 PAPPA-AS1Q5QFB9 102 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
LSM6-204ENST00000504181 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 Q9BRP9 147 aa6.33□□□□□ -1.4
LSM6-204ENST00000504181 A0A1B0GW15 77 aa6.32□□□□□ -1.4
LSM6-204ENST00000504181 SMIM7Q9BQ49 75 aa6.32□□□□□ -1.4
LSM6-204ENST00000504181 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
LSM6-204ENST00000504181 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 HMSDA8MTL9 139 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 Q8N8P6 123 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
LSM6-204ENST00000504181 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
LSM6-204ENST00000504181 H7C2G1 150 aa6.29□□□□□ -1.4
LSM6-204ENST00000504181 S100A8P05109 93 aa6.28□□□□□ -1.4
LSM6-204ENST00000504181 C1orf195Q5TG92 126 aa6.28□□□□□ -1.4
LSM6-204ENST00000504181 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
LSM6-204ENST00000504181 A0A0U1RRA0 63 aa6.27□□□□□ -1.41
LSM6-204ENST00000504181 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
LSM6-204ENST00000504181 RPL23P62829 140 aaKnown RBP6.27□□□□□ -1.41
LSM6-204ENST00000504181 H3BRM9 83 aa6.26□□□□□ -1.41
LSM6-204ENST00000504181 LINC00158P58513 81 aa6.26□□□□□ -1.41
LSM6-204ENST00000504181 Q6ZRX8 168 aa6.26□□□□□ -1.41
LSM6-204ENST00000504181 ST20-AS1Q8NBB2 130 aa6.26□□□□□ -1.41
LSM6-204ENST00000504181 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
LSM6-204ENST00000504181 BOD1L2Q8IYS8 172 aa6.25□□□□□ -1.41
LSM6-204ENST00000504181 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
LSM6-204ENST00000504181 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
LSM6-204ENST00000504181 S100A12P80511 92 aa6.24□□□□□ -1.41
LSM6-204ENST00000504181 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
LSM6-204ENST00000504181 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
LSM6-204ENST00000504181 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
LSM6-204ENST00000504181 ADCYAP1P18509 176 aa6.23□□□□□ -1.41
LSM6-204ENST00000504181 SCGB3A1Q96QR1 104 aa6.23□□□□□ -1.41
LSM6-204ENST00000504181 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
LSM6-204ENST00000504181 MDN1Q9NU22 5596 aa6.23□□□□□ -1.41
LSM6-204ENST00000504181 K7EMI3 77 aa6.22□□□□□ -1.41
LSM6-204ENST00000504181 PMVKQ15126 192 aa6.22□□□□□ -1.41
LSM6-204ENST00000504181 ERASQ7Z444 233 aa6.22□□□□□ -1.41
LSM6-204ENST00000504181 CST9LQ9H4G1 147 aa6.22□□□□□ -1.41
LSM6-204ENST00000504181 ADIRFQ15847 76 aa6.21□□□□□ -1.42
LSM6-204ENST00000504181 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
LSM6-204ENST00000504181 FAM236DA0A1B0GTK5 79 aa6.2□□□□□ -1.42
LSM6-204ENST00000504181 FAM236CP0DP71 79 aa6.2□□□□□ -1.42
LSM6-204ENST00000504181 CD164Q04900 197 aa6.2□□□□□ -1.42
LSM6-204ENST00000504181 G0S2P27469 103 aa6.19□□□□□ -1.42
LSM6-204ENST00000504181 Q5XG85 94 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms