RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 A0A087X002 238 aa10.84□□□□□ -0.67
RNF4-204ENST00000503659 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
RNF4-204ENST00000503659 COLCA2A8K830 154 aa10.83□□□□□ -0.68
RNF4-204ENST00000503659 LINC00158P58513 81 aa10.83□□□□□ -0.68
RNF4-204ENST00000503659 A0A0U1RRA0 63 aa10.82□□□□□ -0.68
RNF4-204ENST00000503659 TMEM238C9JI98 176 aa10.82□□□□□ -0.68
RNF4-204ENST00000503659 H0Y8G0 127 aa10.82□□□□□ -0.68
RNF4-204ENST00000503659 LEPROTL1O95214 131 aa10.82□□□□□ -0.68
RNF4-204ENST00000503659 UBE2AP49459 152 aa10.82□□□□□ -0.68
RNF4-204ENST00000503659 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
RNF4-204ENST00000503659 M0R378 163 aa10.8□□□□□ -0.68
RNF4-204ENST00000503659 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
RNF4-204ENST00000503659 PRLHP81277 87 aa10.79□□□□□ -0.68
RNF4-204ENST00000503659 TSPEAR-AS2P59090 65 aa10.78□□□□□ -0.68
RNF4-204ENST00000503659 HERV-K104P63124 156 aa10.78□□□□□ -0.68
RNF4-204ENST00000503659 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
RNF4-204ENST00000503659 CRYGAP11844 174 aa10.77□□□□□ -0.69
RNF4-204ENST00000503659 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.69
RNF4-204ENST00000503659 FAM19A1Q7Z5A9 133 aa10.77□□□□□ -0.69
RNF4-204ENST00000503659 NDUFA12Q9UI09 145 aa10.77□□□□□ -0.69
RNF4-204ENST00000503659 FABP4P15090 132 aa10.76□□□□□ -0.69
RNF4-204ENST00000503659 PLNP26678 52 aa10.76□□□□□ -0.69
RNF4-204ENST00000503659 MIR7-3HGQ8N6C7 128 aa10.76□□□□□ -0.69
RNF4-204ENST00000503659 HSPB8Q9UJY1 196 aa10.76□□□□□ -0.69
RNF4-204ENST00000503659 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
RNF4-204ENST00000503659 PMCHL2Q9BQD1 86 aa10.75□□□□□ -0.69
RNF4-204ENST00000503659 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
RNF4-204ENST00000503659 LEPROTO15243 131 aa10.74□□□□□ -0.69
RNF4-204ENST00000503659 ATP6V1G1O75348 118 aa10.73□□□□□ -0.69
RNF4-204ENST00000503659 DPM2O94777 84 aa10.73□□□□□ -0.69
RNF4-204ENST00000503659 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
RNF4-204ENST00000503659 BOD1L2Q8IYS8 172 aa10.73□□□□□ -0.69
RNF4-204ENST00000503659 TYMSOSQ8TAI1 123 aa10.73□□□□□ -0.69
RNF4-204ENST00000503659 PLEKHB2Q96CS7 222 aa10.72□□□□□ -0.69
RNF4-204ENST00000503659 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
RNF4-204ENST00000503659 NCR3O14931 201 aa10.71□□□□□ -0.69
RNF4-204ENST00000503659 J3QQQ9 107 aa10.7□□□□□ -0.7
RNF4-204ENST00000503659 TSPAN13O95857 204 aa10.7□□□□□ -0.7
RNF4-204ENST00000503659 IGKCP01834 107 aa10.7□□□□□ -0.7
RNF4-204ENST00000503659 PRR4Q16378 134 aa10.69□□□□□ -0.7
RNF4-204ENST00000503659 DAND5Q8N907 189 aa10.69□□□□□ -0.7
RNF4-204ENST00000503659 MAP1LC3CQ9BXW4 147 aa10.69□□□□□ -0.7
RNF4-204ENST00000503659 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 PRYO14603 147 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BKO60814 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BJP06899 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BOP23527 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BBP33778 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BDP58876 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BCP62807 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST2H2BEQ16778 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BHQ93079 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BNQ99877 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIST1H2BMQ99879 126 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 HIGD2AQ9BW72 106 aa10.68□□□□□ -0.7
RNF4-204ENST00000503659 SPRR1AP35321 89 aa10.67□□□□□ -0.7
RNF4-204ENST00000503659 HERVK_113P61574 105 aa10.67□□□□□ -0.7
RNF4-204ENST00000503659 LOC107984156A0A0G2JMH3 177 aa10.66□□□□□ -0.7
RNF4-204ENST00000503659 NMUP48645 174 aa10.66□□□□□ -0.7
RNF4-204ENST00000503659 ARL17AQ8IVW1 177 aa10.66□□□□□ -0.7
RNF4-204ENST00000503659 KCNQ1DNQ9H478 68 aa10.66□□□□□ -0.7
RNF4-204ENST00000503659 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
RNF4-204ENST00000503659 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.7
RNF4-204ENST00000503659 LGALS3P17931 250 aaKnown RBP10.65□□□□□ -0.7
RNF4-204ENST00000503659 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
RNF4-204ENST00000503659 SYS1-DBNDD2H3BUS1 97 aa10.63□□□□□ -0.71
RNF4-204ENST00000503659 E9PLD3 99 aa10.62□□□□□ -0.71
RNF4-204ENST00000503659 LINC00304Q8N9R0 145 aa10.62□□□□□ -0.71
RNF4-204ENST00000503659 SPRR4Q96PI1 79 aa10.62□□□□□ -0.71
RNF4-204ENST00000503659 C3orf22Q8N5N4 141 aa10.61□□□□□ -0.71
RNF4-204ENST00000503659 TRBV10-2A0A0K0K1G8 114 aa10.6□□□□□ -0.71
RNF4-204ENST00000503659 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
RNF4-204ENST00000503659 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
RNF4-204ENST00000503659 SOSTDC1Q6X4U4 206 aa10.59□□□□□ -0.71
RNF4-204ENST00000503659 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
RNF4-204ENST00000503659 CTAG1AP78358 180 aa10.58□□□□□ -0.72
RNF4-204ENST00000503659 ADAMTSL4-AS1Q5T5F5 129 aa10.58□□□□□ -0.72
RNF4-204ENST00000503659 LINC01545Q5VT33 79 aa10.58□□□□□ -0.72
RNF4-204ENST00000503659 SMCR5Q8TEV8 140 aa10.58□□□□□ -0.72
RNF4-204ENST00000503659 SPANXB1Q9NS25 103 aaPredicted RBP10.58□□□□□ -0.72
RNF4-204ENST00000503659 NDUFC2O95298 119 aa10.57□□□□□ -0.72
RNF4-204ENST00000503659 DDTP30046 118 aa10.57□□□□□ -0.72
RNF4-204ENST00000503659 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
RNF4-204ENST00000503659 ZNF706Q9Y5V0 76 aaPredicted RBP10.57□□□□□ -0.72
RNF4-204ENST00000503659 B5MCH6 92 aa10.56□□□□□ -0.72
RNF4-204ENST00000503659 IGLV6-57P01721 117 aa10.55□□□□□ -0.72
RNF4-204ENST00000503659 NPC2P61916 151 aa10.55□□□□□ -0.72
RNF4-204ENST00000503659 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
RNF4-204ENST00000503659 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
RNF4-204ENST00000503659 S100A12P80511 92 aa10.54□□□□□ -0.72
RNF4-204ENST00000503659 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
RNF4-204ENST00000503659 LITAFQ99732 161 aa10.54□□□□□ -0.72
RNF4-204ENST00000503659 C3orf79P0CE67 100 aa10.53□□□□□ -0.72
RNF4-204ENST00000503659 ERC2-IT1O76042 136 aa10.52□□□□□ -0.73
RNF4-204ENST00000503659 Q9BRP9 147 aa10.52□□□□□ -0.73
RNF4-204ENST00000503659 PPDPFQ9H3Y8 114 aa10.52□□□□□ -0.73
RNF4-204ENST00000503659 LINC00483Q53H64 154 aa10.51□□□□□ -0.73
RNF4-204ENST00000503659 Q6ZRX8 168 aa10.51□□□□□ -0.73
RNF4-204ENST00000503659 S100A7L2Q5SY68 101 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms