RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CHCHD1Q96BP2 118 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-215ENST00000503418 TMEM238C9JI98 176 aa11.45□□□□□ -0.58
UBE2D3-215ENST00000503418 LINC00158P58513 81 aa11.45□□□□□ -0.58
UBE2D3-215ENST00000503418 Q8NDZ9 215 aa11.45□□□□□ -0.58
UBE2D3-215ENST00000503418 YPEL4Q96NS1 127 aa11.45□□□□□ -0.58
UBE2D3-215ENST00000503418 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
UBE2D3-215ENST00000503418 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
UBE2D3-215ENST00000503418 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
UBE2D3-215ENST00000503418 TMEM223A0PJW6 202 aa11.43□□□□□ -0.58
UBE2D3-215ENST00000503418 ATP6V1G1O75348 118 aa11.43□□□□□ -0.58
UBE2D3-215ENST00000503418 S100A1P23297 94 aa11.43□□□□□ -0.58
UBE2D3-215ENST00000503418 M0R378 163 aa11.41□□□□□ -0.58
UBE2D3-215ENST00000503418 KRTAP13-2Q52LG2 175 aa11.41□□□□□ -0.58
UBE2D3-215ENST00000503418 FAM229BQ4G0N7 80 aa11.4□□□□□ -0.58
UBE2D3-215ENST00000503418 HSBP1O75506 76 aa11.39□□□□□ -0.59
UBE2D3-215ENST00000503418 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
UBE2D3-215ENST00000503418 H0Y8G0 127 aa11.38□□□□□ -0.59
UBE2D3-215ENST00000503418 MEIG1Q5JSS6 88 aa11.38□□□□□ -0.59
UBE2D3-215ENST00000503418 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
UBE2D3-215ENST00000503418 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
UBE2D3-215ENST00000503418 COLCA2A8K830 154 aa11.35□□□□□ -0.59
UBE2D3-215ENST00000503418 LINC00304Q8N9R0 145 aa11.35□□□□□ -0.59
UBE2D3-215ENST00000503418 HIGD2AQ9BW72 106 aa11.35□□□□□ -0.59
UBE2D3-215ENST00000503418 BOD1L2Q8IYS8 172 aa11.34□□□□□ -0.59
UBE2D3-215ENST00000503418 TRGC2P03986 189 aa11.33□□□□□ -0.6
UBE2D3-215ENST00000503418 HERV-K104P63124 156 aa11.33□□□□□ -0.6
UBE2D3-215ENST00000503418 MIR7-3HGQ8N6C7 128 aa11.33□□□□□ -0.6
UBE2D3-215ENST00000503418 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
UBE2D3-215ENST00000503418 NCR3O14931 201 aa11.32□□□□□ -0.6
UBE2D3-215ENST00000503418 NDUFA12Q9UI09 145 aa11.32□□□□□ -0.6
UBE2D3-215ENST00000503418 RETNLBQ9BQ08 111 aa11.31□□□□□ -0.6
UBE2D3-215ENST00000503418 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
UBE2D3-215ENST00000503418 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
UBE2D3-215ENST00000503418 LINC00587B1AMM8 73 aa11.29□□□□□ -0.6
UBE2D3-215ENST00000503418 PRYO14603 147 aa11.29□□□□□ -0.6
UBE2D3-215ENST00000503418 SERF1AO75920 110 aa11.29□□□□□ -0.6
UBE2D3-215ENST00000503418 C3orf22Q8N5N4 141 aa11.29□□□□□ -0.6
UBE2D3-215ENST00000503418 LINC00310P59036 64 aa11.28□□□□□ -0.6
UBE2D3-215ENST00000503418 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
UBE2D3-215ENST00000503418 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
UBE2D3-215ENST00000503418 SPRR4Q96PI1 79 aa11.26□□□□□ -0.61
UBE2D3-215ENST00000503418 LEPROTO15243 131 aa11.25□□□□□ -0.61
UBE2D3-215ENST00000503418 FABP4P15090 132 aa11.25□□□□□ -0.61
UBE2D3-215ENST00000503418 PLNP26678 52 aa11.25□□□□□ -0.61
UBE2D3-215ENST00000503418 HSPB8Q9UJY1 196 aa11.25□□□□□ -0.61
UBE2D3-215ENST00000503418 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
UBE2D3-215ENST00000503418 DAND5Q8N907 189 aa11.24□□□□□ -0.61
UBE2D3-215ENST00000503418 PMCHL2Q9BQD1 86 aa11.24□□□□□ -0.61
UBE2D3-215ENST00000503418 KCNQ1DNQ9H478 68 aa11.24□□□□□ -0.61
UBE2D3-215ENST00000503418 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-215ENST00000503418 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
UBE2D3-215ENST00000503418 HERVK_113P61574 105 aa11.23□□□□□ -0.61
UBE2D3-215ENST00000503418 LINC00337Q8N6G1 96 aa11.23□□□□□ -0.61
UBE2D3-215ENST00000503418 MUC2Q02817 5179 aa11.22□□□□□ -0.61
UBE2D3-215ENST00000503418 DPM2O94777 84 aa11.22□□□□□ -0.61
UBE2D3-215ENST00000503418 SPRR1AP35321 89 aa11.22□□□□□ -0.61
UBE2D3-215ENST00000503418 J3QQQ9 107 aa11.21□□□□□ -0.61
UBE2D3-215ENST00000503418 S100A12P80511 92 aa11.21□□□□□ -0.61
UBE2D3-215ENST00000503418 IGKCP01834 107 aa11.2□□□□□ -0.62
UBE2D3-215ENST00000503418 SMCR5Q8TEV8 140 aa11.2□□□□□ -0.62
UBE2D3-215ENST00000503418 LGALS3P17931 250 aaKnown RBP11.19□□□□□ -0.62
UBE2D3-215ENST00000503418 CTAG1AP78358 180 aa11.19□□□□□ -0.62
UBE2D3-215ENST00000503418 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
UBE2D3-215ENST00000503418 KRTAP4-16G5E9R7 235 aaPredicted RBP11.18□□□□□ -0.62
UBE2D3-215ENST00000503418 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
UBE2D3-215ENST00000503418 IGLV7-46A0A075B6I9 117 aa11.17□□□□□ -0.62
UBE2D3-215ENST00000503418 DDTP30046 118 aa11.17□□□□□ -0.62
UBE2D3-215ENST00000503418 NMUP48645 174 aa11.17□□□□□ -0.62
UBE2D3-215ENST00000503418 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
UBE2D3-215ENST00000503418 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
UBE2D3-215ENST00000503418 C4orf48Q5BLP8 95 aa11.16□□□□□ -0.62
UBE2D3-215ENST00000503418 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
UBE2D3-215ENST00000503418 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
UBE2D3-215ENST00000503418 TRBV10-2A0A0K0K1G8 114 aa11.15□□□□□ -0.62
UBE2D3-215ENST00000503418 TPRXLQ17RH7 258 aa11.15□□□□□ -0.62
UBE2D3-215ENST00000503418 SPANXB1Q9NS25 103 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-215ENST00000503418 B5MCH6 92 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 Q8NBF4 154 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
UBE2D3-215ENST00000503418 A0A0U1RQV1 116 aa11.13□□□□□ -0.63
UBE2D3-215ENST00000503418 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
UBE2D3-215ENST00000503418 GAGE2AQ6NT46 116 aa11.13□□□□□ -0.63
UBE2D3-215ENST00000503418 NPC2P61916 151 aa11.12□□□□□ -0.63
UBE2D3-215ENST00000503418 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
UBE2D3-215ENST00000503418 NDUFC2O95298 119 aa11.1□□□□□ -0.63
UBE2D3-215ENST00000503418 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
UBE2D3-215ENST00000503418 A0A0J9YXY3 114 aa11.09□□□□□ -0.63
UBE2D3-215ENST00000503418 E9PLD3 99 aa11.09□□□□□ -0.63
UBE2D3-215ENST00000503418 Q6ZRX8 168 aa11.09□□□□□ -0.63
UBE2D3-215ENST00000503418 IGLV9-49A0A0B4J1Y8 123 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms