RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 SPINK8P0C7L1 97 aa9.91□□□□□ -0.82
HERC6-204ENST00000502870 AKAP14Q86UN6 197 aa9.91□□□□□ -0.82
HERC6-204ENST00000502870 COX17Q14061 63 aa9.9□□□□□ -0.82
HERC6-204ENST00000502870 MRPL18Q9H0U6 180 aaKnown RBP9.9□□□□□ -0.82
HERC6-204ENST00000502870 H3BRM9 83 aa9.89□□□□□ -0.83
HERC6-204ENST00000502870 ERASQ7Z444 233 aa9.89□□□□□ -0.83
HERC6-204ENST00000502870 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
HERC6-204ENST00000502870 ERG28Q9UKR5 140 aa9.89□□□□□ -0.83
HERC6-204ENST00000502870 PCOTHQ58A44 107 aa9.88□□□□□ -0.83
HERC6-204ENST00000502870 SCGB3A1Q96QR1 104 aa9.88□□□□□ -0.83
HERC6-204ENST00000502870 SSBP3-AS1Q7Z2R9 100 aa9.87□□□□□ -0.83
HERC6-204ENST00000502870 MOBPQ13875 183 aa9.86□□□□□ -0.83
HERC6-204ENST00000502870 LINC00483Q53H64 154 aa9.86□□□□□ -0.83
HERC6-204ENST00000502870 SMCR5Q8TEV8 140 aa9.85□□□□□ -0.83
HERC6-204ENST00000502870 IGLV9-49A0A0B4J1Y8 123 aa9.84□□□□□ -0.83
HERC6-204ENST00000502870 LINC01549A6NIU2 74 aa9.84□□□□□ -0.83
HERC6-204ENST00000502870 PRYO14603 147 aa9.84□□□□□ -0.83
HERC6-204ENST00000502870 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
HERC6-204ENST00000502870 Q8NDZ9 215 aa9.82□□□□□ -0.84
HERC6-204ENST00000502870 CST9LQ9H4G1 147 aa9.82□□□□□ -0.84
HERC6-204ENST00000502870 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
HERC6-204ENST00000502870 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
HERC6-204ENST00000502870 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
HERC6-204ENST00000502870 PEA15Q15121 130 aa9.8□□□□□ -0.84
HERC6-204ENST00000502870 PMVKQ15126 192 aa9.8□□□□□ -0.84
HERC6-204ENST00000502870 IGLV5-39A0A0G2JS06 123 aa9.79□□□□□ -0.84
HERC6-204ENST00000502870 ADCYAP1P18509 176 aa9.79□□□□□ -0.84
HERC6-204ENST00000502870 C9JQL5 133 aa9.78□□□□□ -0.84
HERC6-204ENST00000502870 ZNF625Q96I27 306 aaPredicted RBP9.78□□□□□ -0.84
HERC6-204ENST00000502870 SPRR1AP35321 89 aa9.77□□□□□ -0.85
HERC6-204ENST00000502870 S100A12P80511 92 aa9.76□□□□□ -0.85
HERC6-204ENST00000502870 KCNQ1DNQ9H478 68 aa9.76□□□□□ -0.85
HERC6-204ENST00000502870 LINC00158P58513 81 aa9.74□□□□□ -0.85
HERC6-204ENST00000502870 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
HERC6-204ENST00000502870 C9orf92A6NGG3 77 aa9.72□□□□□ -0.85
HERC6-204ENST00000502870 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
HERC6-204ENST00000502870 C9orf153Q5TBE3 101 aa9.72□□□□□ -0.85
HERC6-204ENST00000502870 LIMD2Q9BT23 127 aa9.71□□□□□ -0.86
HERC6-204ENST00000502870 NCR3O14931 201 aa9.69□□□□□ -0.86
HERC6-204ENST00000502870 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
HERC6-204ENST00000502870 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
HERC6-204ENST00000502870 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
HERC6-204ENST00000502870 MT-ND4LP03901 98 aa9.68□□□□□ -0.86
HERC6-204ENST00000502870 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
HERC6-204ENST00000502870 ANAPC16Q96DE5 110 aa9.68□□□□□ -0.86
HERC6-204ENST00000502870 B5MCH6 92 aa9.67□□□□□ -0.86
HERC6-204ENST00000502870 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
HERC6-204ENST00000502870 ERC2-IT1O76042 136 aa9.66□□□□□ -0.86
HERC6-204ENST00000502870 NDUFA6P56556 154 aa9.66□□□□□ -0.86
HERC6-204ENST00000502870 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
HERC6-204ENST00000502870 TRBV10-3A0A0K0K1G6 114 aa9.65□□□□□ -0.86
HERC6-204ENST00000502870 A0A0U1RRA0 63 aa9.65□□□□□ -0.86
HERC6-204ENST00000502870 IGLV6-57P01721 117 aa9.64□□□□□ -0.87
HERC6-204ENST00000502870 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
HERC6-204ENST00000502870 FA2HQ7L5A8 372 aa9.63□□□□□ -0.87
HERC6-204ENST00000502870 SMCO4Q9NRQ5 59 aa9.63□□□□□ -0.87
HERC6-204ENST00000502870 CFC1P0CG37 223 aa9.62□□□□□ -0.87
HERC6-204ENST00000502870 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
HERC6-204ENST00000502870 Q6ZRX8 168 aa9.62□□□□□ -0.87
HERC6-204ENST00000502870 Q9BRP9 147 aa9.61□□□□□ -0.87
HERC6-204ENST00000502870 SSPOA2VEC9 5147 aa9.61□□□□□ -0.87
HERC6-204ENST00000502870 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
HERC6-204ENST00000502870 JOSD1Q15040 202 aaPredicted RBP9.59□□□□□ -0.87
HERC6-204ENST00000502870 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
HERC6-204ENST00000502870 C11orf86A6NJI1 115 aa9.57□□□□□ -0.88
HERC6-204ENST00000502870 MIR7-3HGQ8N6C7 128 aa9.57□□□□□ -0.88
HERC6-204ENST00000502870 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
HERC6-204ENST00000502870 DDTP30046 118 aa9.56□□□□□ -0.88
HERC6-204ENST00000502870 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
HERC6-204ENST00000502870 USH2AO75445 5202 aa9.55□□□□□ -0.88
HERC6-204ENST00000502870 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
HERC6-204ENST00000502870 C5orf52A6NGY3 159 aa9.54□□□□□ -0.88
HERC6-204ENST00000502870 SLC25A34Q6PIV7 304 aa9.54□□□□□ -0.88
HERC6-204ENST00000502870 MAP1LC3CQ9BXW4 147 aa9.54□□□□□ -0.88
HERC6-204ENST00000502870 HERV-K104P63124 156 aa9.53□□□□□ -0.88
HERC6-204ENST00000502870 TRBV10-2A0A0K0K1G8 114 aa9.52□□□□□ -0.89
HERC6-204ENST00000502870 BAGE3Q86Y29 109 aa9.52□□□□□ -0.89
HERC6-204ENST00000502870 Q6Q795 121 aa9.5□□□□□ -0.89
HERC6-204ENST00000502870 FCGBPQ9Y6R7 5405 aaPredicted RBP9.49□□□□□ -0.89
HERC6-204ENST00000502870 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
HERC6-204ENST00000502870 HBDP02042 147 aa9.48□□□□□ -0.89
HERC6-204ENST00000502870 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
HERC6-204ENST00000502870 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
HERC6-204ENST00000502870 A0A096LNJ9 63 aa9.47□□□□□ -0.89
HERC6-204ENST00000502870 CD164Q04900 197 aa9.47□□□□□ -0.89
HERC6-204ENST00000502870 SPANXB1Q9NS25 103 aaPredicted RBP9.47□□□□□ -0.89
HERC6-204ENST00000502870 CHTOPQ9Y3Y2 248 aaKnown RBP9.47□□□□□ -0.89
HERC6-204ENST00000502870 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
HERC6-204ENST00000502870 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
HERC6-204ENST00000502870 TRAV23DV6A0A075B6W5 121 aa9.45□□□□□ -0.9
HERC6-204ENST00000502870 COX19Q49B96 90 aa9.45□□□□□ -0.9
HERC6-204ENST00000502870 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
HERC6-204ENST00000502870 MYMXA0A1B0GTQ4 84 aa9.44□□□□□ -0.9
HERC6-204ENST00000502870 SPRR1BP22528 89 aa9.44□□□□□ -0.9
HERC6-204ENST00000502870 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
HERC6-204ENST00000502870 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
HERC6-204ENST00000502870 ZNF73O43830 326 aaPredicted RBP9.43□□□□□ -0.9
HERC6-204ENST00000502870 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
HERC6-204ENST00000502870 SYNE2Q8WXH0 6885 aaKnown RBP9.42□□□□□ -0.9
HERC6-204ENST00000502870 S100PP25815 95 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms