RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 HIGD1BQ9P298 99 aa12.4□□□□□ -0.43
LINC01550-201ENST00000499006 PRO1933Q9H354 126 aa12.39□□□□□ -0.43
LINC01550-201ENST00000499006 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
LINC01550-201ENST00000499006 EIF4EBP3O60516 100 aaPredicted RBP12.38□□□□□ -0.43
LINC01550-201ENST00000499006 SOSTDC1Q6X4U4 206 aa12.38□□□□□ -0.43
LINC01550-201ENST00000499006 Q6ZVH6 145 aa12.38□□□□□ -0.43
LINC01550-201ENST00000499006 FAM168BA1KXE4 195 aa12.37□□□□□ -0.43
LINC01550-201ENST00000499006 EPM2AB3EWF7 344 aa12.37□□□□□ -0.43
LINC01550-201ENST00000499006 KRTAP7-1Q8IUC3 87 aa12.37□□□□□ -0.43
LINC01550-201ENST00000499006 PLA2G2DQ9UNK4 145 aa12.37□□□□□ -0.43
LINC01550-201ENST00000499006 A0A1W2PNN7 141 aa12.36□□□□□ -0.43
LINC01550-201ENST00000499006 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
LINC01550-201ENST00000499006 APOBP04114 4563 aaKnown RBP12.36□□□□□ -0.43
LINC01550-201ENST00000499006 A0A087WYN8 130 aa12.35□□□□□ -0.43
LINC01550-201ENST00000499006 MIEN1Q9BRT3 115 aa12.35□□□□□ -0.43
LINC01550-201ENST00000499006 NPC2P61916 151 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 Q8NDZ9 215 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 DPH3Q96FX2 82 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 PPDPFQ9H3Y8 114 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 PLAC8Q9NZF1 115 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 IFITM1P13164 125 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 SRSF9Q13242 221 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01550-201ENST00000499006 SERTAD4-AS1Q5TG53 156 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 CIRBP-AS1Q8TBR5 109 aa12.34□□□□□ -0.43
LINC01550-201ENST00000499006 SCXQ7RTU7 201 aa12.33□□□□□ -0.44
LINC01550-201ENST00000499006 VPREB1P12018 145 aa12.32□□□□□ -0.44
LINC01550-201ENST00000499006 MUSTN1Q8IVN3 82 aa12.32□□□□□ -0.44
LINC01550-201ENST00000499006 IGLV5-37A0A075B6J1 123 aa12.31□□□□□ -0.44
LINC01550-201ENST00000499006 XGP55808 180 aa12.31□□□□□ -0.44
LINC01550-201ENST00000499006 FAM19A5Q7Z5A7 132 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-201ENST00000499006 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
LINC01550-201ENST00000499006 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
LINC01550-201ENST00000499006 HIST1H4GQ99525 98 aa12.3□□□□□ -0.44
LINC01550-201ENST00000499006 NDUFC2O95298 119 aa12.29□□□□□ -0.44
LINC01550-201ENST00000499006 HAMPP81172 84 aa12.29□□□□□ -0.44
LINC01550-201ENST00000499006 RPL24P83731 157 aaKnown RBP12.29□□□□□ -0.44
LINC01550-201ENST00000499006 TAL2Q16559 108 aa12.28□□□□□ -0.44
LINC01550-201ENST00000499006 C22orf24Q9Y442 160 aa12.27□□□□□ -0.44
LINC01550-201ENST00000499006 HNRNPA3P51991 378 aaKnown RBP12.27□□□□□ -0.45
LINC01550-201ENST00000499006 M0QXV9 152 aa12.26□□□□□ -0.45
LINC01550-201ENST00000499006 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
LINC01550-201ENST00000499006 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
LINC01550-201ENST00000499006 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
LINC01550-201ENST00000499006 PHF5AQ7RTV0 110 aaKnown RBP12.24□□□□□ -0.45
LINC01550-201ENST00000499006 CEND1Q8N111 149 aa12.24□□□□□ -0.45
LINC01550-201ENST00000499006 NCR3O14931 201 aa12.23□□□□□ -0.45
LINC01550-201ENST00000499006 HSD52Q0P140 79 aa12.23□□□□□ -0.45
LINC01550-201ENST00000499006 MRPL55Q7Z7F7 128 aaKnown RBP12.23□□□□□ -0.45
LINC01550-201ENST00000499006 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
LINC01550-201ENST00000499006 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
LINC01550-201ENST00000499006 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
LINC01550-201ENST00000499006 A4D1N5 150 aa12.21□□□□□ -0.45
LINC01550-201ENST00000499006 M0R378 163 aa12.21□□□□□ -0.45
LINC01550-201ENST00000499006 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
LINC01550-201ENST00000499006 HSPG2P98160 4391 aa12.21□□□□□ -0.45
LINC01550-201ENST00000499006 LINC00167Q96N53 147 aa12.21□□□□□ -0.46
LINC01550-201ENST00000499006 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
LINC01550-201ENST00000499006 CTAG1AP78358 180 aa12.19□□□□□ -0.46
LINC01550-201ENST00000499006 FXYD2P54710 66 aa12.18□□□□□ -0.46
LINC01550-201ENST00000499006 RYR1P21817 5038 aa12.18□□□□□ -0.46
LINC01550-201ENST00000499006 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
LINC01550-201ENST00000499006 DDTP30046 118 aa12.17□□□□□ -0.46
LINC01550-201ENST00000499006 KRTAP11-1Q8IUC1 163 aa12.17□□□□□ -0.46
LINC01550-201ENST00000499006 LINC00337Q8N6G1 96 aa12.17□□□□□ -0.46
LINC01550-201ENST00000499006 KIAA1109Q2LD37 5005 aa12.17□□□□□ -0.46
LINC01550-201ENST00000499006 IGLV1-50A0A075B6I6 118 aa12.16□□□□□ -0.46
LINC01550-201ENST00000499006 RPL37AP8A6NKH3 93 aa12.15□□□□□ -0.46
LINC01550-201ENST00000499006 BIRC6Q9NR09 4857 aa12.15□□□□□ -0.46
LINC01550-201ENST00000499006 IGLV6-57P01721 117 aa12.14□□□□□ -0.47
LINC01550-201ENST00000499006 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
LINC01550-201ENST00000499006 CFC1BP0CG36 223 aa12.14□□□□□ -0.47
LINC01550-201ENST00000499006 CFC1P0CG37 223 aa12.14□□□□□ -0.47
LINC01550-201ENST00000499006 VPS13BQ7Z7G8 4022 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 TMEM238LA0A1B0GVL6 79 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 A6NJY4 79 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 SMR3BP02814 79 aaPredicted RBP12.13□□□□□ -0.47
LINC01550-201ENST00000499006 UBE2BP63146 152 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
LINC01550-201ENST00000499006 TMEM126AQ9H061 195 aa12.12□□□□□ -0.47
LINC01550-201ENST00000499006 TRAV13-2A0A0B4J235 113 aa12.11□□□□□ -0.47
LINC01550-201ENST00000499006 A0A0B4J2C4 111 aa12.1□□□□□ -0.47
LINC01550-201ENST00000499006 OR13C6PQ8NH95 151 aa12.1□□□□□ -0.47
LINC01550-201ENST00000499006 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
LINC01550-201ENST00000499006 FAT1Q14517 4588 aa12.1□□□□□ -0.47
LINC01550-201ENST00000499006 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
LINC01550-201ENST00000499006 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
LINC01550-201ENST00000499006 PSORS1C2Q9UIG4 136 aa12.09□□□□□ -0.47
LINC01550-201ENST00000499006 A6NDN8 102 aa12.08□□□□□ -0.47
LINC01550-201ENST00000499006 M0R143 59 aa12.08□□□□□ -0.47
LINC01550-201ENST00000499006 A0A1B0GWB2 263 aa12.08□□□□□ -0.48
LINC01550-201ENST00000499006 NHP2Q9NX24 153 aaKnown RBP12.08□□□□□ -0.48
LINC01550-201ENST00000499006 PRYO14603 147 aa12.07□□□□□ -0.48
LINC01550-201ENST00000499006 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
LINC01550-201ENST00000499006 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
LINC01550-201ENST00000499006 SPRR1AP35321 89 aa12.05□□□□□ -0.48
LINC01550-201ENST00000499006 REG3GQ6UW15 175 aa12.05□□□□□ -0.48
LINC01550-201ENST00000499006 KRTAP17-1Q9BYP8 105 aa12.05□□□□□ -0.48
LINC01550-201ENST00000499006 RPL13AP40429 203 aaKnown RBP12.04□□□□□ -0.48
LINC01550-201ENST00000499006 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms